Kryptolebias marmoratus (mangrove rivulus): 108229290
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Entry
108229290 CDS
T05608
Symbol
spg7
Name
(RefSeq) paraplegin isoform X1
KO
K09552
spastic paraplegia 7 [EC:3.4.24.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108229290 (spg7)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
kmr03110
]
108229290 (spg7)
Peptidases and inhibitors [BR:
kmr01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
108229290 (spg7)
Chaperones and folding catalysts [BR:
kmr03110
]
Other chaperones and cochaperones
AAA proteases
108229290 (spg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_17
AAA_5
nSTAND3
AAA_22
RuvB_N
TIP49
AAA_16
AAA_2
DUF1506
Mg_chelatase
AAA_28
AAA_14
IstB_IS21
ABC_tran
DUF8203
PglZ
NACHT
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
108229290
NCBI-ProteinID:
XP_017260451
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All DBs
Position
LG15:complement(5072557..5079665)
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AA seq
807 aa
AA seq
DB search
MLALLLQQTAGVCRKHSRCLLLMLSKRSSHVLANKQINTDGGKHVLSRCAGVRRTLLSRS
ERTITSQPPEKVIQSLLHRPLGPGMEGLSKELIRNNLLRNPVGLVNLLGATNFFSASQSK
QQQNKNSGPKGKTPQEDEEEKKRREQQEQMYRERLRVLFIIALIMSLLNSINTSGGNISW
NDFVNEMLAKGEVSQVQVVPESDIVEIYLHAGAVIFGRPQRLALMYRMQVANIDKFEEKL
RAAEDELNIDTKDRIPVSYKRTGFFGNAIYALGMAAIGVGILWYIFRLVGMGAREGFSAF
NQLKMAKFTIVDVKAGKGVRFKDVAGMYEAKIEVMEFVDYLKSPERYLQLGAKVPKGALL
LGPPGCGKTLLAKAVATEAQVPFLALAGSEFVEVIGGLGAARVRNLFKEARARAPCILYI
DEIDAVGKKRSTNMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALMR
PGRLDRHIFIDLPTLQERKEIFEQHLKILKLTQPANFYSLRLAELTPGFSGADIANICNE
AALHAAREGFKSIDTFNFEYAVERVLAGSVKKNKILRKEEQRVVAFHESGHALVGWLLEH
TDAVMKVSIAPRTNAALGFAQILPRAQFLFTKEQLFQRMCMALGGRAAEAITFNKVTTGA
QDDLRKVTRVAYSMVKQYGMCDSVGQVSFPETEEQGAIGRRPFSQGLQQQMDHEAKMLIA
RAYRQTEKLLLDNRDKLTLLANALLEREVVNYDDIEALLGPPPHGPKKRILPQSWVDAER
DKQDTGEDEPRPPPRKHREEDIDPQLT
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgttagctctgttgctgcagcaaaccgctggtgtttgtagaaaacacagcagatgttta
cttctaatgctttcaaagcgaagctcccacgttttagcaaacaaacagataaacaccgac
ggtggtaaacatgtgctgtcaaggtgtgctggtgtcaggaggacgcttctttcaagatcg
gagcggacaataacaagccagccaccggagaaagtcatccagagtcttcttcacagacct
ttgggtcctggcatggaaggacttagcaaagagttaatcaggaacaacctgctgagaaac
ccagttggcttagtaaatctgttaggggcaacaaactttttcagtgcgtctcagtctaaa
caacagcaaaataaaaattctggaccaaagggaaaaactccacaggaagatgaagaggag
aagaagcgccgcgagcagcaggagcagatgtaccgcgagcgcctgcgggtcctcttcatc
atagcgctcatcatgagcctgctgaactccattaacaccagtggtgggaacatctcatgg
aatgactttgtcaacgagatgttggccaagggagaggtgtcgcaagtgcaggttgttcct
gagagcgacatcgtggaaatctaccttcacgcaggggcagttatttttggaagacctcag
aggctggcgctcatgtacagaatgcaggttgctaacattgacaaatttgaggagaagctg
agggcggctgaagatgagctgaacattgacactaaggacagaatccccgtgtcctacaaa
cgcactggattctttgggaacgccatctatgccctggggatggctgctatcggcgtgggg
atcctctggtacatcttccggcttgtagggatgggtgccagagaaggcttcagtgctttt
aatcagctgaagatggccaagttcaccattgtagacgtgaaagctggcaaaggagtgaga
tttaaagatgtagcgggcatgtacgaggctaagattgaagtgatggagtttgttgactac
ttaaagagtccagaacgatacctccagctgggagccaaagttccaaagggtgcgctgctg
ctcgggcctccaggatgtggaaagactttgctagctaaggctgtcgctacagaagcccag
gtgccgtttctggctttggctggctccgagtttgtagaggtcattggaggtctcggcgct
gcaagggtccggaatctgttcaaagaggctcgtgctcgagcaccctgcattctttacatc
gatgagatcgatgccgtagggaagaaacgctccaccaacatgtccggtttctcgaacacc
gaggaggagcagacgctcaaccagctcctggtggaaatggacggaatgggaaccacagac
catgtcattgttcttgcctccactaacagagcagatatcttggacaatgctctgatgaga
ccaggccggctggacagacacatcttcatagatctgcccacactgcaggagaggaaggag
atcttcgagcaacatctgaagatcctgaagttgacccaaccagcaaatttctattctctg
cggctggctgagctcaccccaggcttcagcggtgcggacatcgctaacatttgtaacgaa
gcagcgctgcacgctgccagggagggcttcaaatccatcgatacctttaacttcgagtac
gctgttgagcgagtattagcagggagtgtaaagaagaataagatcctgcgtaaggaggag
cagagagttgttgcttttcatgagtcgggacacgcattagtgggctggctgctggagcac
accgatgcagtgatgaaggtgtccattgcccctcggaccaacgcagccctgggttttgct
cagattttacctcgtgcacagttcctgttcaccaaggagcagctgttccagcgcatgtgc
atggctttaggaggaagagctgcggaggcaatcaccttcaacaaggttaccacaggagct
caggatgacctgcgtaaagtgacccgtgtggcgtactcgatggtgaagcagtacggcatg
tgtgacagcgttggacaggtctcgttccctgagacagaggaacaaggggccattggacgg
cgtcctttcagccagggcctgcagcagcagatggaccatgaggctaagatgttgatagct
cgtgcttacagacagacagagaagctgctgctggacaacagggacaagctcacactgttg
gccaacgccctgttagagcgcgaggtggtgaactacgacgacattgaagccttgctgggt
ccgccgcctcacgggcccaagaagaggatcctcccacagagctgggtggacgctgagagg
gacaaacaggacacgggagaagacgaaccccgaccacctcctcgcaaacacagagaggag
gacatagatcctcagttaacctga
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