Kryptolebias marmoratus (mangrove rivulus): 108229316
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Entry
108229316 CDS
T05608
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108229316
03036 Chromosome and associated proteins [BR:
kmr03036
]
108229316
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108229316
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108229316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
DTHCT
zf-C2H2_REST
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_15
zf-C2H2_6
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
108229316
NCBI-ProteinID:
XP_017260476
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All DBs
Position
LG15:complement(9092687..9099363)
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AA seq
764 aa
AA seq
DB search
MEGEVVTMEAAQAAAMAAEGKVLPEGGEALIQAAQGEVTGNMDMMVMDALDPTLLQMKTE
VLEGGGTVTVTGGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTTATVEGLQATYVE
APSANKDVEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAQDELQGAREEEEEEEE
DDEETGEVETAVPQQEDPEWSKDPDYQPIAAVRKAKKGKKSRLRYAEGDRDMDVSVYDFE
EEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHT
DERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEK
PFKCSMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYEC
YICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKC
RYCDAVFHERYALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACNQCD
KTFRQKQLLDMHFKRYHDPNFVPTAFVCGKCSKTFTRRNTMLRHAENCMGEAAGDENGTP
TPKKGRRGRKRKMQSRRDDDDDDDDDEEENTEGELDEVEEDDEMLAEMEVEQAAPVVPIP
APVEPPVKRKRGRPPKNKPETAAIIRVEDEATGEVDDIIVKKEVGAEPDDSSGLAEEVVV
GGVKSTIQMEELAPEGEAAQEVQLSEAPPNGDLTPEMILSMMDR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggttgttaccatggaggcagctcaggctgccgccatggccgctgaagga
aaggtcctgccggaaggcggagaggctttgatacaagcggcgcagggtgaagtgaccggg
aacatggacatgatggtgatggatgctctggatccgactctgctgcaaatgaagacggag
gttctggaggggggcggcacagtaaccgttactggtggagacgaggggcagatcatcacg
ctccaggtggtgaatatggaggaacaagcaggtgctgcattgggcctgggtcagcttcag
ctggtccaggtacctgtgactacagcaactgtagaggggctccaggccacttatgttgaa
gcgccatcagctaacaaggatgtagaaccagttatttgtcacacacttcctttgcctgaa
ggcttccaggttgtaaaagtgggtgccaatggtgaagtggagaccgtggagcaggaggag
ctccaagctgcccaggatgagctccaaggagcaagggaggaggaggaggaggaagaagag
gacgacgaggagacaggggaagtggaaaccgctgtccctcagcaagaagacccagaatgg
tcaaaggacccggattaccagccgatcgccgctgtccgcaaggcgaagaaagggaaaaag
agtcgccttcgctacgcagagggtgaccgtgacatggatgtgtctgtgtacgacttcgag
gaggagcagcaggaggggctgctgtcagaggtgaatgcagagaaggtcgtgggcaacatg
aagcctccaaagcccacaaagatcaagaaaaaaggtgtgaagaagaccttccagtgtgag
ctctgtagctacacctgtccacggcgctctaatctggaccgccacatgaagagccacaca
gatgagagaccacacaagtgtcacctgtgcggaagagccttcaggactgtcacactgctg
agaaaccacctcaatacacacacaggcactcggccccataaatgcacagattgtgacatg
gcttttgtgaccagcggtgagttggtgcgccatcgccgctacaaacacacacatgagaag
ccattcaagtgttcaatgtgtgactattccagtgtggaggtgagcaagttgaaaaggcac
atccgctctcacacaggggagcggcccttccagtgcagcctctgcagctatgccagcaga
gacacttacaagctgaagagacacatgaggacacactcaggcgagaagccgtacgagtgc
tacatctgccacgctcgtttcacacagagcggcaccatgaagatgcacattctgcagaaa
cacacagagaacgtggccaagttccactgcccacactgtgatactgtcatcgcacgcaag
agtgacctcggtgttcacttaaggaagcagcactcgtttattgagacgggcaagaagtgt
cgctactgcgacgctgtgtttcatgagcgctacgctctcatccagcatcagaagacccac
aaaaatgagaagcgctttaagtgtgaccagtgtgactactgctgcagacaggaacgccac
atgataatgcataagcgtacgcacacgggggagaagccgtttgcctgtaaccagtgtgac
aagacgttccgtcagaaacagctcctggacatgcacttcaagcgctaccacgatcccaac
ttcgtccccaccgctttcgtctgcggcaagtgtagcaagacgttcacccgcaggaacacc
atgctgcgtcacgctgagaactgcatgggcgaagctgccggagatgaaaacggaactcca
actcccaagaagggccgccgtggcaggaagaggaagatgcagtccaggagggatgatgat
gatgatgatgacgacgatgaggaggagaacactgagggagaactggatgaagtggaggag
gacgacgaaatgttagctgaaatggaggtggagcaggctgcaccggttgttcccatccct
gcaccagtggagcccccggtcaagaggaaacgtggacgaccccccaagaacaagcctgag
accgctgccatcatccgcgtggaggacgaggccactggcgaggtggacgacatcatcgtg
aagaaggaggtcggggccgagccggacgacagcagcggcttggcagaggaggtggtggtg
ggcggcgtcaagtcgaccattcagatggaggagctggccccggagggagaggcggcgcag
gaggtgcagctgtctgaggcccctcccaacggagacctgacccccgagatgatcctcagc
atgatggaccgatga
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