Kryptolebias marmoratus (mangrove rivulus): 108229522
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Entry
108229522 CDS
T05608
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
kmr00535
]
108229522 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
kmr00537
]
108229522 (gpc6a)
Proteoglycans [BR:
kmr00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
108229522 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
kmr00537
]
Others
108229522 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
SpoIVA_C
Motif
Other DBs
NCBI-GeneID:
108229522
NCBI-ProteinID:
XP_017260689
UniProt:
A0A3Q2ZCA7
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Position
LG15:complement(4264539..4414249)
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AA seq
569 aa
AA seq
DB search
MYAMWRLQVAFCTLSVLSLSSAAESKARSCSDVRQAFSAKEFSLHVPHQEISGEHLRVCP
QGYTCCTSEMEDKLNQQSKSQFERMVEESSLNMRTTFISRHKKFDEFFLELLDNSEKSLN
SMFTKTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQYH
FTDDYLECVTKYGDQLKPFGDVPRKLKALVTRAFIAARTFVQGLMVGREVANRVAKVNVV
PACVKALTKMLYCPYCRGMPGLKPCHNYCHNVMRGCLANQADLDAEWNVFIDAMLLVADR
LVGPFNIEAVIEPIDIKISEAIMTMQDNSMQVSAKVFQECGQPKPSGVGRSARGISDVFS
ARFRPYTPEQRPTTATGTSLDRLRVVWRTMQHSVIDIKEKLKESRRFWSKLPDDICAEGK
LTESDDEQCWNSHTKGRYFPEVVKEGLTNQLSNPEVEVDITRPDTLIRQQIMALRVMTNK
LKNAYNGNDIYFQDSSDEGSTSGSGNDCSDGCTTELVFVATEAPVIGADRSNERAAAAAP
SKSLSCGPSTLLVMATLALPLWAMQTQWR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgatgtggagactgcaggtcgccttctgtactctgtcggtgctgtccctgtca
tcagctgctgagagcaaagcgcggagctgtagcgacgttagacaagcttttagcgcgaaa
gaattcagcctccatgtacctcatcaggaaatatcaggtgagcacctccgtgtctgtcct
cagggatacacctgctgcacatccgagatggaggacaaactcaaccagcagagcaaatca
cagtttgagcgtatggtcgaggagagcagcctcaacatgaggacaacgtttatctccaga
cataaaaagtttgatgagtttttcttggagctgctggacaactctgaaaaatctctcaac
agtatgttcacaaagacatatgggaagctgtatatgcagaactctgaggtgtttcaggac
cttttcaccgaactaaagcgctactacacaggaggcaacgtaaacctggaggagatgttg
aacgacttctggtcgaggctgctggagcgcatgttccagttactcaactcccagtaccac
ttcacagacgactacctggagtgtgtcaccaaatacggagaccagctaaagccctttgga
gacgtgcccaggaagctaaaagctctggtcaccagggcatttatagctgcacggacgttt
gtccaagggctaatggtgggccgggaggtcgccaacagggtcgctaaggtgaacgtagtt
ccagcgtgtgtcaaagccttgacaaagatgctgtactgtccatactgccgcggcatgcct
gggctgaaaccctgccacaactactgtcacaacgttatgaggggctgtttagcaaaccag
gcagaccttgatgcagaatggaacgttttcatagacgccatgttgctggtcgcagacaga
ctggtgggtcctttcaacatcgaagcagttattgaaccaatcgacattaagatatctgag
gcaatcatgaccatgcaggacaacagcatgcaagtatcagcaaaggtgtttcaagagtgc
gggcagccgaagccatcaggagtaggtaggtctgcacggggcatctcagatgtgtttagt
gctcgcttcaggccatatacccctgaacagaggccgaccacagcaactggaacaagcctg
gatagactgagggttgtctggaggacaatgcaacacagtgtgatcgacatcaaagagaag
ctcaaagagtctaggaggttctggtccaaattgccagatgacatctgcgccgaaggcaaa
ctcacagagtctgatgacgagcagtgttggaacagccacacaaagggcagatatttccct
gaggtggtaaaggagggtctaaccaaccagttgagcaacccagaggttgaagtggacatc
accagacctgacacgctgattcggcaacagatcatggctctacgagtcatgaccaacaag
ctaaagaacgcctacaatggaaatgacatctacttccaagattccagtgacgagggcagc
acatctggcagtggcaacgactgctccgatggatgcacaacagagttagttttcgttgca
acagaagctcctgtgatcggagccgacaggagcaacgaacgcgctgccgcagcagctcca
agcaagtcactttcctgtggaccgtccacgctgttggtaatggctaccctcgctctccca
ctttgggcaatgcagactcagtggagataa
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