Kryptolebias marmoratus (mangrove rivulus): 108229622
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Entry
108229622 CDS
T05608
Name
(RefSeq) DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108229622
Membrane trafficking [BR:
kmr04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108229622
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
SPA
PPR
Motif
Other DBs
NCBI-GeneID:
108229622
NCBI-ProteinID:
XP_017260779
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLDPAGPWRPLDDDGKTSSSSSSSVRAVQPVTDLVVIARGLGEE
VPEGFTCIEKTLGGHSAELSAGLINNPHLYLCYRRGRDKPPVLDLGVLYEGKEQLKQGWY
VIETTPYSRSASLSSGGAPTAHRVFLTYRRALDSQGLHTLGVTDIALLMPSKGEVAPHTF
CRVDKNLNTGMWGPALYVCYKRAVAKANALLFEAGLISRYPEEDLDSFPLPESVPVFCLP
MGVSVESWPLNTKYQLPIFSTFVLTSASGDKVYGAAIQFYESFSKDLLSERQSVQLGLLS
VVDRRPISSRSLHVKKSICVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHVSSFMHN
VPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASFLKLLQNLGPENTCTLLLAVLTE
HKLLLHSLRPDVLTSVSEALVSMTFPLRWLCPYIPLCPLQMADVLLAPMPFIVGVHSSYF
DLHDPPAEVMCVDLDTNTIFQLEDKKPLSWRSLPRKQGKTLFNTLTNLHRTLEKICSPGQ
EEATLEFLLTDYDQIYRRQKQLELEIQEAFLRFMSCLLRGYRTFLLPITEAPSDRATDCS
SLFHLQGFLKSRDRTQQKFYTQMTRTQMFTQFIEECSFVSDRHACLEFFDECVQKVDVEK
PEEVRLIDLDETHSGEHTVFIMPPEEPQEADGSECPAPYSYETFPTLKAELFDRPQDQLR
VPAKGSAPDSPAPRRTKQEIKLAQQRAQKYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAE
SSKVRALHTAYDVLKHMETRKVVLPDEVCYRILMQLCGLYGEPVLAVRVLLEMKKAGVTP
NTITYGYYNKAVLESKWPSTNQGGHLRWVKLRNVLLAVAQFRRPIRRRQKSDSVGSRGET
VMEPDQKPHPHSALIRQSSWSGLSESSSHESLSGSLMKSSSLNSMKTPSDKVRPCKKTVL
SNAKMNGCGDAASQKPPLGRRDASAPPPAPPAGVVVRRSQVCLSTFYSECAESADSEPED
RDGRSERARNSAHRNKAVDENYNNVSSPSRGGLTGKLQQLLTPTRHRASSRRAASVDNRR
S
NT seq
3242 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggagaaatgtccccagctggtggactacttcgtagtggcgggtctggaccct
gcggggccctggaggcccctggacgatgacgggaagacctcttcctcctcgtcttcatcg
gtgcgggcggtgcagccggtgacggacctggtggtgatcgctcggggtctcggagaggaa
gtacctgaaggtttcacctgcatcgagaagacactggggggccactcggcggagctgagt
gccggcctcatcaacaacccgcacctctacctgtgttaccgccgaggacgggacaaacct
cccgtcctggacctgggggttctgtatgaggggaaggagcagctcaaacagggctggtac
gtcatcgagacgacgccctacagccgctcggccagcctgagctcgggcggcgctccaacg
gctcaccgtgtcttcctgacgtaccgccgggctctggactctcagggtctccacacgctg
ggcgtcactgacatcgctctgctgatgcccagcaagggcgaggtggcgccgcacaccttc
tgtcgggtcgacaagaacctcaacacaggcatgtggggtccagctctgtacgtctgctat
aagagagccgtggccaaagccaacgccctgctgtttgaagctggtctgatcagccggtac
cccgaggaggacctggactcgttccccttgcccgagtcggtgccggtgttctgtctgccg
atgggcgtcagcgttgagagctggcccctcaacaccaagtaccagctacccatcttctcc
accttcgtcctgacgtccgcctccggggacaaggtttacggcgctgccatccagttctac
gagtcattctccaaggatcttctgtcggagcggcagagcgttcagctcggcctgctcagc
gtggtggaccggcggccaatcagcagccgcagcctccacgtcaagaagagcatctgcgtc
ctgtcccactggcccttcttcaccgtcttccagaagttccttaccttcgtctacagatac
tccatctccgggccccatgtcctgccgctcgaaaaacacgtctccagcttcatgcataac
gtcccgtttccgtcccctcagcgtcctcggatcctcgtccagctctcgccgtacgacaac
ctgctgctctgccagccggtctcctcccccctgcctctcagcggagcgagctttctgaag
ctgctgcagaacctcggcccggagaacacgtgcacgctgctgctggccgtcctgacagaa
cacaaactgctgctgcactcgctgagacccgacgtcctgacctccgtcagcgaggccctt
gtctctatgacctttcccctgcgctggctgtgtccctacatccctctgtgcccgctgcag
atggccgacgtcctgctggcgcccatgcccttcatcgtcggcgtccactccagctacttt
gacctgcacgacccccccgctgaggtgatgtgtgtcgacctggacaccaacaccatcttc
cagttggaggacaaaaagccgttgtcatggcgatcgttacccagaaagcagggcaaaact
ctgttcaacacactgacgaacctccacagaactctggagaagatttgcagtcctggccag
gaggaggcgacgctggagttcctgctcacggactacgatcagatctacaggcgtcagaag
cagctggagctggagatccaggaggccttcctgcgcttcatgagctgcctgctgcgagga
taccgcaccttcctgctgcccatcacagaggcgccgtcggaccgggccaccgactgcagc
tccctgttccacctgcagggtttcctgaagtctcgggaccgaacgcagcagaagttttac
acccagatgacgaggactcagatgttcactcagttcatcgaggagtgctccttcgtcagc
gaccgacacgcctgcctcgagttcttcgacgagtgcgtccagaaggtggacgtagagaag
ccagaggaggtccggctgatcgatcttgatgagactcacagtggagaacacaccgtcttc
atcatgcctcctgaggagccgcaggaagctgacggctccgagtgccctgccccctacagt
tatgagactttcccgaccctgaaagcagaactgttcgaccgaccgcaggaccagctccga
gtcccggccaaaggcagtgctcccgatagccccgccccccgacgcaccaaacaggagatc
aagttggcccagcagcgggctcagaagtactctgcggttccggacatgtggtccaagtgt
ttgctgggtcactgttacggcctgtggttcatctacctgcccaccttcgtccgggccgag
tcctccaaggtccgggccctgcacacggcctacgatgttctgaagcacatggagacccgc
aaggtggttctgccggacgaggtgtgttaccgcatcctgatgcagctgtgcggtctctac
ggcgagccggtcctcgcagtccgggtcctcctggagatgaagaaggctggagtcacaccc
aacaccatcacctacggctactacaacaaggccgtcctggagagtaagtggccgtccacc
aatcagggcggccatctccgctgggtcaagctgaggaacgtcctattggctgtggcccag
ttcagacgaccaatcagacggcggcagaagagcgactctgtgggctcccggggagaaacg
gtgatggaaccggaccagaagccccacccacactcggctctgattcgtcagtccagttgg
agcggtctgagtgaaagctccagtcacgagtctctgagcgggtctctgatgaagagcagc
agcctgaacagcatgaagacgccgagtgacaaggtccgaccctgtaagaagacagttctc
tctaatgctaagatgaatggttgtggagacgcagcctctcagaagcctcctctgggacgg
cgcgatgcctccgcccctcctcctgcgccccctgctggagtggtggtccgccgcagtcag
gtctgcctctccaccttctactcagagtgtgctgagtctgcagactcggagccggaggac
agagacggcaggtctgagagggcgcgaaactccgcccacaggaacaaggctgtagacgag
aactacaacaacgtgtcgtctccgagccgaggaggtctgacaggaaaactccagcagctc
ctcacgccaaccagacaccgagcatcgtcccggagagctgccagcgtggacaaccggcgg
tc
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integrated database retrieval system
