Kryptolebias marmoratus (mangrove rivulus): 108229754
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Entry
108229754 CDS
T05608
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03015
mRNA surveillance pathway
kmr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108229754
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108229754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108229754
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
108229754
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
CMC4
Motif
Other DBs
NCBI-GeneID:
108229754
NCBI-ProteinID:
XP_017260918
UniProt:
A0A3Q3A0J5
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Position
LG15:6275917..6283223
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AA seq
471 aa
AA seq
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MAAARPAAGASSSKSEHIDLYGDLYANDEEDLDKIAEANELFDAVLTGTVDQDKKVTTKV
PSSKGAPAKEEGTSTDAKTHKAEKSQRRLSLYIGNFPWWTSDEELLGIAQRLSVKDITQI
KFAENKVNGQSRGYAEVVVTSNESLQILLEKIPQCHINGESLDCRFATLQNLRVFEEIAN
KRMPLRVNSDSKESNSTEKPPTPSLKESTAPPIPSLFLPHSLPNSFPSTSNPFLVQPPPL
FPNMPPGISALMPPHMFPPPPVQMSVQPSPSLHMNPAFFSPVQDGHSSKSYSQQTKPPQN
KDGDFEELMTRNKTIASSAITKAVSGATAGDLHMAMETLLTAIAIIKQSKVYRDERCQAL
VTSLKDCLVSIQGNNGYERSSRSREKDRDRGRDRDHERDRERDRDHERDRERDRDHERDR
ERYRERYRDDFYDRESAGKSRRHRERSWSGERDKERSGERERYRDYRDRYR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcacgacctgcagccggagcaagctcctctaaaagcgagcacatcgatttg
tacggcgacctctacgcaaacgatgaagaggatttggataaaattgctgaagcgaacgaa
ctttttgatgctgttcttactggtacggttgatcaagacaagaaggtgaccactaaagta
ccttcctccaaaggtgctccagctaaagaggagggtacatcgactgatgccaaaacacat
aaagcagaaaagtcacagagaagactgtctttatatattgggaatttcccctggtggaca
tctgatgaggaacttttaggtatcgcccaaagattgagtgtgaaggacatcacacaaatc
aaatttgctgagaataaagttaatggccagtccagaggctatgcagaagtggtggtaacc
tcaaacgagtcacttcagattttattggaaaaaataccacaatgtcacataaatggggaa
tcgttagactgtcggtttgccactcttcagaacctccgtgtgtttgaggaaatcgccaat
aaacgtatgcctttgcgtgtaaattcagattctaaagaatctaactcaacagaaaagcct
cccacgccatcgttaaaggaatccactgcccctcctattccttcactttttctaccacat
tcacttccaaacagcttcccgtcaacttccaacccctttcttgttcagccgcctccactc
ttcccaaacatgccaccgggaatctctgcactcatgccaccacacatgtttcctccccct
cctgtccagatgtctgtccaaccgtctcccagtcttcacatgaatcctgctttcttcagc
ccagtacaagacggacacagcagcaaatcatacagccagcaaacaaaaccacctcagaat
aaagacggagattttgaagaactaatgaccagaaacaaaactattgccagcagtgcaatc
accaaggctgtgtctggagcaacagctggtgaccttcatatggccatggagacattatta
acagctattgccatcattaaacagtccaaagtgtacagagatgaacgctgccaagctctc
gtcacctcactaaaagactgtttagtttcgatccagggcaacaatggctacgagagaagc
agccgttctagagaaaaggaccgggacagaggtcgtgacagagaccacgagcgagacaga
gagcgcgacagagaccacgagcgcgacagagagcgcgacagagaccacgagcgcgacaga
gagcgatatagagaacgctacagagatgacttttacgacagggagagtgcaggaaagtca
cgaagacacagagaacgttcctggagtggagagagggacaaggagcgctcgggggaacgg
gaaagatacagagattacagagaccgataccgctga
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