Kryptolebias marmoratus (mangrove rivulus): 108229807
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Entry
108229807 CDS
T05608
Symbol
cul4a
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03420
Nucleotide excision repair
kmr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108229807 (cul4a)
09124 Replication and repair
03420 Nucleotide excision repair
108229807 (cul4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108229807 (cul4a)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108229807 (cul4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108229807 (cul4a)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
108229807 (cul4a)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108229807 (cul4a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
108229807 (cul4a)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108229807 (cul4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
108229807
NCBI-ProteinID:
XP_017260966
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All DBs
Position
LG15:3788344..3800492
Genome browser
AA seq
752 aa
AA seq
DB search
MAEDTRQKRASFSSLTGHGTNGMARTSSKTGASKKIVIKNFKDRPKLAENYTEDTWLKLR
DAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIHQFREESLD
NLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHIVSDGV
IQKRTVDGILEQIELERSGETIDRSLLRSLLGMLSDLQVYKDSFEERFLTETNRLYAAEG
QQLMQERDVPEYLHHVARRLEEENDRIVSYLDQSTQKPLINCIEKQLLGEHMTAILQKGL
SNLLDENRVTELTLLYQLFSKVKGGLPILLQFWRDYIKSFGGEIVCAPEKDKDMVQELLD
FKDKMDNVVQSCFARNEAFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATEE
ELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAF
TSKLEGMFKDMELSKDIMIQFKQYMQNQSEPSNIELTVNILTMGYWPSYTPMEVHLPSEM
VKLQEVFKLFYLSKHSGRKLQWQPTLGHAVLKSEFKEGKKEVQVSLFQTLVLLMFNEGEE
FSVEEIRSATGIEEGELRRTLQSLACGKARVLNKNPRGKDVEDGDRFNFNNDFKHKLFRI
KINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLKFPV
KPGDLKKRIESLIDRDYMERDKETPNQYHYVA
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggacactcgacagaagcgggccagcttctcgtccctgacgggacacggaacc
aacgggatggccaggacctccagcaaaaccggcgcctccaagaaaatcgtcatcaaaaat
ttcaaagacaggccgaaactagccgagaactacacggaggacacgtggctgaagcttcga
gacgcagtgggagccatccagaacagcacctccatcaagtacaacctggaggagctctat
caggcggtggagaacctgtgttcgtacaaagtctccccgacgctgtacaagcagctgcgt
caggtctgcgaagatcacgttcaggcgcagatccaccagttcagagaagagtctctggat
aacctttctttcctaaagcgaatgaatcgctgctggcaggaccactgcaggcaaaccata
atgatccgaagtatcttcctcttcctggatcgcacctacgtgctccagaactccctgctc
ccctccatctgggacaccgggctggagctgttccgcacccacatcgtgagcgacggcgtc
atccagaagcggacggtggacggcattttggagcagatcgagctggagcggagcggggaa
accatcgatcgcagccttctccgcagcctgcttggcatgctgtcagacctgcaggtttat
aaagactcctttgaggagagatttttgactgagacgaatcgtctctatgcagccgaggga
cagcagctgatgcaggagagagacgtaccagagtatttgcaccacgtggctcgccgttta
gaagaggagaacgaccgaatcgtgagctacctcgaccagagcactcagaagcctctcatt
aactgcatcgagaaacagcttttaggagaacacatgactgcaattcttcaaaaaggtctg
agcaacctgctggatgagaaccgtgtgactgaactgaccctcctctaccagctcttcagt
aaggtgaagggaggacttcccatcctgctgcagttttggagggattatatcaagtcgttc
ggtggagagatcgtatgcgcgccagagaaagacaaagacatggttcaggagctgctggac
tttaaggacaagatggacaacgtggtgcagagctgcttcgctcggaacgaggctttcatc
aacgccatgaaggaggcctttgaaacgtttatcaacaagagacccaacaagcccgccgag
ctcatcgccaaatacgtcgactcgaagctgagagctgggaacaaggaggcgacggaggag
gaactggagagaatcctggacaagatcatgatcattttccgcttcatccacgggaaagac
gtgtttgaagccttttataagaaggacttggccaaacgcctgctggttggaaagagcgcc
tctgttgacgccgagaagtccatgctctccaaactaaagcacgaatgcggagcagcgttc
accagcaaactggaggggatgtttaaggacatggagctgtccaaagacatcatgatccag
ttcaaacagtatatgcagaaccagagtgagccgagcaacatagaactcactgtgaacatc
ctgactatgggctactggccttcgtacacaccgatggaggtccacctgccctcagagatg
gtgaaactccaggaggtgttcaagctgttctacctcagtaagcacagcgggaggaagctc
cagtggcagcccaccctgggccacgccgtcctgaagtcagagtttaaagaggggaagaag
gaggtgcaggtttccctgttccagacgctagtgctgctcatgtttaacgagggagaggag
ttcagcgtggaggagatccgctccgccaccggaatagaggagggggagctcaggcgcacg
ctgcagtccctggcctgcgggaaagcccgtgtcctcaacaagaacccccgagggaaagac
gtggaggacggagaccgtttcaatttcaacaacgattttaaacacaagctgttccgcatc
aagatcaaccagattcaaatgaaagaaacggtagaggagcaggtaagcactacggagcgc
gtctttcaggaccggcagtatcagatcgacgcagccgttgtgcgcatcatgaaaatgagg
aagaccctgagtcacaacctgctggtgtcagagctctacaaccagctgaagttccccgtc
aagccgggcgacctgaagaagaggatcgagtctctcatcgacagggactacatggagcgc
gacaaggagactccaaaccagtatcactatgttgcctga
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integrated database retrieval system
