Kryptolebias marmoratus (mangrove rivulus): 108229841
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Entry
108229841 CDS
T05608
Symbol
tbc1d2b
Name
(RefSeq) TBC1 domain family member 2B isoform X2
KO
K20166
TBC1 domain family member 2B
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108229841 (tbc1d2b)
Membrane trafficking [BR:
kmr04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108229841 (tbc1d2b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_8
XLF_CC
PH_11
USP8_interact
PH_6
Spectrin_SESTD1
DUF7491
Motif
Other DBs
NCBI-GeneID:
108229841
NCBI-ProteinID:
XP_017261019
UniProt:
A0A3Q3B6J8
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All DBs
Position
LG11:complement(13936925..13951508)
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AA seq
1046 aa
AA seq
DB search
MTYVGFSVFTSCVAGLLRHYPLPLPSSCRTAPPSGAPRVGACSVSFEHYISQSPSVQDEG
SHADGNRSCHPPRCARKKLRGKMHEEEDGGDSSSSSAPRLPTFRSVDVADTDGAKEQDPK
LCGYLNKLSGKGPLRGYKLRWFVYDPRKCYLYYFKTPQDALPLGHIDIGDACFMYDVEGD
EGQFEVRAAGKEFLLKAPNRQVMNYWLQQLQQKRWEYNSTRGSGQRDSWSSPTLVYPPTG
LVGKDNDAIFIENQSENLEKVRSDFAMETELDPGGMVGIQSARGANANPINFSLRNFGTE
LRNTMSHLRPGRAGENRRSVFYTSNSSSEDWEMIDPPAKDFPEQKPHLDSHRHSFGSAFT
FDFGRSAARPKRSSLRDVRGTGRFGRGSENPPAECNGGKASDAQLRLQNQQDELSQLQQE
QVKLREELSSQTELVRLLQQTLRTSQCDRPAVHRPAPGSPTPPDQNETSAVAEEDVAQLE
ALLQERDGQIPSLCGHMERLTLEKESLQKELKGLKIKVGEMNDQLGMLMETIQAKDDVIM
KLSQQSHEQSANPNEGGSPALHKEQQELDVLKDSLQGYKSQNKFLNKEILELTVLRRNAE
TREKALEAKCTALEAKLCQVESKYLVLLQEVRTPVCSSSEQSPTREVISRLLEDALQAES
SDQQEHAIFKPHTVSEYDAYGFKTVPEEEEEEERLDARLRALELKSLSMTDQEVSVGVKW
ENFLASTMNRDLVRSPELKALIRCGVPHKHRSLVWRWCVSMHVKKFQDHLAPDYYETLLA
VARERPNPASKQIELDLLRTLPNNKHYASPSAGGIHKLRNVLLAFSWRNPDIGYCQGLNR
LAAIALLYLDQEDAFWTLVAIVEVFMPRDYYTKTLLGSQVDQRVFKDLMSEKLPRLHAHF
EQHKVDFSLITFNWFLVVFVDSVVSDILFKIWDAFLFEGPKIIFRFALALFKFKEEDFLK
LQDSTAIFKCLRCFTRKILDSRKLMNIAFVDMNPFPMRQIQNRRSFHLEKVRLELTELEA
IRQTFLKERETSQDRRSFVSDDEEDT
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgacttatgttgggttttctgtatttaccagttgtgtcgcaggactgttacgtcattac
ccgcttccacttccttcgtcttgccgaacagcaccacctagcggcgctccccgtgtgggc
gcctgctccgtgtccttcgagcactacatttcccagagcccctctgttcaggacgaaggc
agtcatgcggatggaaacaggagttgccatccgccgcgctgcgcgaggaagaaacttcgg
gggaagatgcatgaagaggaggatggcggtgactcgagctccagctcggccccgcggctg
ccgacctttaggtccgtggacgtggccgacaccgacggcgcgaaggagcaggaccccaag
ctgtgcggctacttgaacaagctgtccggcaaggggcctctcagggggtacaagctgcgc
tggttcgtgtacgacccgaggaaatgttacttgtattacttcaagactccccaggacgcc
ctgcccctcggacacatcgatatcggcgacgcctgcttcatgtacgacgtggagggggac
gagggccagtttgaggtccgcgcagccgggaaggagttcctcttgaaggcccccaatagg
caggtgatgaactactggctgcagcagctgcagcagaaacgctgggagtacaacagcacg
cgaggcagtggccagagagacagctggagctccccgacgctggtttatcctcccaccggc
ctcgtaggcaaggataacgatgccatcttcattgagaaccaaagtgaaaacctggagaag
gtccggagtgacttcgccatggaaactgagctcgaccctggcgggatggtggggatccag
tccgccagaggggcaaacgcaaaccccatcaacttctccctgagaaacttcggcacagag
ctcagaaacaccatgtctcatctgcggcccggcagagcaggcgagaacaggcgcagcgtg
ttttacaccagcaacagcagttcagaggattgggagatgatcgatcctccagccaaggac
ttccctgagcagaagcctcatctggactcacacagacattccttcggctcggcgttcacg
tttgatttcgggcgcagcgccgcgcggcccaagaggtcctccctccgagacgtgagggga
acggggaggttcgggcgcggctcggagaacccgccggcggagtgcaacggcggcaaagct
tcagacgcacagcttcggctgcagaaccagcaagacgaactgagccagctgcagcaggaa
caagtcaaactgcgagaggagctgtccagccagacggagctggtgaggcttctgcagcag
actctcagaacctcccagtgtgaccggcccgctgtgcaccgaccagctccaggttccccc
acccccccagaccagaacgagacttcggctgtggccgaggaggacgtggctcagctggag
gcactgcttcaggaaagggacggacagatcccgtcgctgtgtggccacatggagcggctg
accctggagaaggagagcctgcagaaggagctgaagggcctgaaaatcaaggtgggggaa
atgaacgaccagctgggaatgctgatggagaccatccaggcgaaggacgacgtcatcatg
aagctgtcgcagcagagccacgagcagagcgcgaatccaaacgagggaggctccccagcg
ctgcacaaggagcagcaggagctggacgtcctcaaggacagtcttcaaggctacaaatcc
cagaacaagttcctgaacaaagagatcctggagctgacggtgctgcgaagaaacgcagag
actagagaaaaggctttagaggcaaagtgcaccgctctggaggccaagctgtgtcaggtg
gagagtaaatatttggtgctgcttcaggaggtccggactcccgtgtgctcgtcgtcggag
cagagcccgactcgggaggtcatttccaggttgctggaggacgcgctgcaggcggagagc
tcggaccagcaggagcacgccatcttcaaaccgcacacggtcagtgagtacgacgcgtac
ggcttcaagacggtccccgaggaggaggaagaggaggagaggctggacgccaggctcagg
gccttggagctgaagtccctgtccatgacggaccaggaggtgtcggtcggggtgaagtgg
gagaactttctggccagcaccatgaacagagacctggtgcgctcccccgagctcaaggcg
ctgattcgctgcggcgtgccccacaagcaccgctccctcgtgtggcgctggtgcgtctcc
atgcacgtcaagaaattccaggaccacttggcgccggactattacgagaccttgctggct
gtggcccgggagaggcccaacccggcttcgaagcagatcgagctggacttgctgcgcacg
ttgcccaacaacaagcactacgcctcgccgagcgcaggcggcatccacaaactcaggaac
gtcctgctggccttttcctggaggaatcccgacatcggctactgtcagggactgaacagg
ctagcagctattgccttgctgtacttagaccaagaagatgccttttggacccttgtagcc
attgtggaggttttcatgcctagagactattacacaaagactctgcttggctctcaggtc
gaccagcgtgtgtttaaagacctgatgagcgagaagctgccgcgccttcatgcccacttc
gagcagcacaaagtggacttctccctcatcaccttcaactggttcctggtggtgtttgtg
gacagcgtggtgagcgacatcctctttaagatctgggacgcctttctgttcgaagggccg
aagatcatatttcgattcgctctcgctctgttcaagttcaaagaggaagactttttgaag
ctgcaggactccacggccatcttcaaatgcctccgctgcttcacgcgcaaaatcctggac
tcaaggaagctgatgaacatcgccttcgttgacatgaacccgttccccatgaggcagatc
cagaaccgccgctccttccacctggagaaggtgcgcctcgagctgacggagctggaggcc
atcaggcagaccttcctgaaggagagggagacgagccaggacagacgcagcttcgtcagc
gacgacgaggaggacacctga
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