Kryptolebias marmoratus (mangrove rivulus): 108229961
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Entry
108229961 CDS
T05608
Symbol
frem3
Name
(RefSeq) FRAS1-related extracellular matrix protein 3
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
108229961 (frem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
108229961
NCBI-ProteinID:
XP_017261183
UniProt:
A0A3Q2ZPZ9
LinkDB
All DBs
Position
LG3:complement(13802113..13831612)
Genome browser
AA seq
3139 aa
AA seq
DB search
MAGCLQSSQLCKKWAFFRCLLVTFYLSSCAGSVFSQSFDSGPLYYHRSGPNEDNILIANN
GIKVPFGRSVFLDPVNDLVTEVQPGDRCHITVLDNDPLAQKPGALTPQRFPCLFGANEVK
YTHFGSRSPSKDRVKLQLRYDSQTDTVIIPFMLEVEVVFHQLEILLRNMPLSVEKLNGDS
SPIDKKALEFSYEDGVTQCKIATLVGAGGLPRYGTLLNSPTNGQMVACDEFVKMGIQYKH
TAKTRSPNRDYIPMMVELQDNDGNTIMQEHFQSMVRIREGTENTAPKPSFVAMMMMEVDQ
FVMTAITSDMLAAEDIESDPDNLIFNITSPMNPQQGYIISTDDQNLPITSFNQRDIKDLK
IAYKPPSEDSEQERIFQLEFEIVDTDGAVSDPFAFMIVVKPMNTLAPVATKNTGQLLFEG
QSRALSSAQNLEISDEDNLEDVKITVVDGLKHGDLTVLGARRKFFTPTDLDAGIVVYQHD
GSDTYSDNIIFRMTDGSNEVEFLFPITIAPTDDEPPIINANTGLVLFKNEIMQISPFILS
ATDIDSEDSTIKFIMEVPFSAIRELLLRQTEPPTDPSQWKFSETDEMFEQVVTEWFQQDI
LDGKLFYRHIGPHSTTTVTDQFMFRVQDDNDPPNQSGEHIFIIKIHPVDDLPPELFQGTT
LHMTVQEYELTFFRKKFLCYTDLDSDDRDLKYTITKPPIDSDENSPAPLGKIVLTDNPDI
VIREFTQAQVNHHKVAYKPPDVELGITPKVAQFTFTVEDTAGNSADGLFTIFLQPVDNKP
PFITNTGFTVMERSTYVITNKELYATDTDTDDENIVFTVTQNPQYGQLQYLGVYMSNGET
FVLEDIANGRLTYIHGGEESLGDLIKFSVSDGFHEVPIVIRITIEPVDDETPTIMLPAGL
LGASIDVLENGATEITSNVIQGRDKDTDDLMLTFIVEEPPRLGEILVNGAPAERFTQEDI
INGMVVYAHTSGEIGPVKKHDSFNLTLSDMSDQWVVGGNKVQGVTVHVTILPVDSIPPVV
SVGGQFVVVEGEKNVITLDNIQAEDVDTNNDDILCTIIVQPSSGYVENISPATGSEKSRA
GTAITAFTIKDIAVGHVYYVQSIHKGVEPVEDQFTFRCTDGINFSERHFLPVVIIPANDE
KPEIYAREFVVLEGMNIVIDTPILNAADADIPGDELHFEIIKKPKHGTIIQQLSSGTIPV
EKFSLEQIKEAANIVYEHDDSETKKDSFEIRLSDGKHKVEKTVLIMVIPVDDETPRMAIN
DGLDVEIGETKVISNRVLKATDLDSEDKELTYIVRYGPGQGYLQRISKFGDVLGNITLGM
NFTQDEIDKQLIQYVHTGQEGIRDLLKFDVTDGINPLIDRYFYINIGSIDMVFPDVINKG
VMLKEGGKVTLTTDLLSTTDINSPDEYLSFSITRAPSRGHLECTDHPGVPISTFTQLQLA
GNKIYYIHTSDDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTVHKLVVEEGET
KLITPFELTVEDRDTLDNLLRFTVTQVPVHGQLLFNKTQPITTFTKQDLNENLISYKHDG
TETNEDSFSFIVTDGTHTDFYVFPDTVYETRKPQMMTIHINTVDNGVPQIVVNKAAASLK
VLHTGHLGFVITSKVIRSEDRDSPQRVLKYTVSEPPLHGFIINTALGNDSIKTFTQAEIN
EMKICYVLLDRSNATSDIFYFTVEDNGGNKLKPQPFRLNWAWVSLEQEYYLVDEDAKFLE
VTLKRRGYLGETSFVSIATKDGTAEQDKDFRGKAQKQVQFNPGQTTATWKVKIFTDQEFE
ISETFEIHLSDPVMAALEYPDITTVEIVDPGDESTVFIPQAEFKIEEDIGELLVPVRRSG
DASQDLMVVCYTQQGTATGTVPTTVLSYSDYITRPEDHTSVLRFDKDEREKICRIIIIDD
SLYEEEESFNVSLSLPMGGQVGAHFPSAKVTILADSDDEPSLYFGEPEYVVDESSGYVEV
KVWRTGTDLSKTATVTVRSRKSDPVSAEAGLDYVGISRNLDFAPGVTMQTFRVTILDDLG
QPKLEGPETFDLVLRMPMNAVLGEPSRATITINDTVTDLPKVQFKEGNYKVDESDGDVSA
TVYRSGDISLISTVHCYTRQGSAQVMMDYSERPNTDASVITFLPGESEKQCVVSLMDDSV
HEEDEEFRLVLGSPKSKSPYGASVGEQKEALVTITDDKDKPIIRFSEIKYSVREPQVKGD
VAIVKIPILRFGDTSKVSVVRVHTKDGSATSGDDYNPLSEDVVFKEDEREHFVEIEILYD
GQREMREAFIVHMKPDDNMVAEIQMNKAIVYIEEMDSVADVTFPAVPQVVSLLMYDDTSK
TRDRPYPPNGYPVVCVTACNPKYHDFDKTGSICSAENINDTLTQYRWLVSAPTESDGVTS
PMREVDTNTFFTNTKSITLDSIYFQAGSRVQCAARAFNTNGDAGLELSSPIVVISNDEGM
CQPRIPGIVGAEPFSAKIRYTGPDDPDFPNLIKLTINMPHMDGMLPVISTKPLSNFELTL
SPDGTRVGNHRCSNLLDFNEIQTGYGFITDATKNPEIIGETSPYQYSTVMRSANSLRFYR
NLNLEACLWEFTSYYDMSELLNDCGGSIGTDGQVLNLVQSYVTLRVPLFVSYVFHSPVAV
GGWQHFDLQSELKLTFVYDTAILWQDGIGSPPEAELQGAMYPTSMRINEEGRLVVYFKTE
ARFRGQFVMSHPGTSVSSMVICADHPGLTFTLALVRTEPTYNQPMQQWSFISDFAVRDYS
GTYTVKLVPCIASPNGEFSIPPVCHPREPLTFDVDIRFQQVSDPVAAEFSLNTQMFLLSK
KELWLSDGSMGFGEGTDAAFSEGSTIYGRVMVDPVQNLGDSFSCSIEKVFLCTGADGYVP
KYNPTNKEYGCLADAPSLLYRFKILDKAQPETQAPAFGDIAFKAKLAQDYPGAQPLVRQP
GSDGFMLSSSPLFQVAAGREWFIHTIYMVRSKENTNRNIGKRSVEYLQHGISSVGQPHAS
DAARRHRRAAPSFSGQVLTQDIGIKNNRGTNIQHIALDRSDRIVVSQRQPWSPNHEPLLE
RPLLESSGREPADTSFLPMLVGIASLILLVCTVATIVILLLRCKRREKKSQFPPYTTSSS
SAYSHGAAGMWSSSDSSEV
NT seq
9420 nt
NT seq
+upstream
nt +downstream
nt
atggctggttgtctgcaaagttcccaactttgtaaaaagtgggcattttttagatgtctg
cttgtgactttttatctcagctcctgtgctggctcagtattttcacagtcgttcgattct
ggtcccctttattaccacaggtctggacctaatgaagacaacatccttattgccaacaat
ggaattaaggtgccttttgggagatcagtgtttttggacccagtgaatgacctggttaca
gaagttcagcctggtgaccgctgccatataacagttctggataatgaccctttggcccag
aaacctggggcgctcacccctcaaaggtttccctgtttgtttggagcgaatgaagtgaag
tacacccattttggatctcggagtcccagtaaggatcgtgtgaagttgcagcttcgctat
gactcccagacggacacagttatcatccctttcatgttggaagtggaggtggttttccac
cagcttgagatcctcctcaggaatatgcccctcagtgttgagaaactcaatggagacagc
agccccattgacaaaaaggctctggagttttcctacgaggatggtgtcacgcagtgtaaa
atcgccactctggtcggcgctggaggtcttcccaggtatggcactctactgaacagcccc
accaatggtcaaatggttgcttgtgatgagtttgtaaaaatgggtattcagtacaaacac
actgctaaaaccaggtcaccaaacagagattatattccaatgatggtagagctgcaggat
aatgatggtaacacaataatgcaagagcatttccaaagtatggtgagaatcagagaaggt
actgagaacactgctcccaaacctagttttgtagccatgatgatgatggaggtcgatcag
tttgtgatgaccgcaattacaagtgacatgctggctgctgaagatattgaatctgaccca
gacaatttgatctttaacattacttcaccaatgaacccccagcagggttatatcatcagc
acagatgatcaaaaccttcccatcacctccttcaatcagagggatatcaaagatctgaaa
atagcctacaagccaccttcagaggactcagaacaagagaggattttccagctggagttt
gaaattgtagataccgatggtgcagtgtctgatccatttgcttttatgattgtagtgaag
cccatgaacactctggctccagttgcaaccaaaaacacaggacagctattgtttgaaggg
cagtctcgagctctctccagtgcacaaaatttagaaataagtgacgaggataacctggaa
gatgtgaagattacagtggtggatggtttaaaacacggagacctgactgtgcttggtgca
cgcaggaaattctttacacccacagatctagatgccggcattgttgtgtaccagcatgat
ggcagtgacacatacagcgacaacattattttccgaatgactgatggaagtaatgaagta
gagtttttgttccctattaccattgctcccactgatgatgagcccccaataattaatgca
aacacaggcctggtgctgttcaagaatgaaattatgcagatctctcccttcatcctgagt
gctacagatatcgattcagaagattccactattaagtttatcatggaagtaccattctct
gctataagggagctcctgctcaggcaaacagagccccccactgacccatctcagtggaag
ttcagtgagacagatgagatgttcgaacaggtggtgactgaatggtttcagcaggatatt
ctcgacggaaaattgttctatcggcacattggaccccatagcaccaccactgtgactgat
cagtttatgtttcgtgtacaagatgacaatgacccacctaatcaatcgggtgagcacatc
ttcatcattaaaatccatcctgtcgatgacctcccccctgagcttttccaaggcaccacc
cttcacatgacagtccaggaatatgagctcacattctttcgaaagaagttcttgtgttat
actgatctagattcagatgacagagacctgaaatacaccatcactaaaccaccaatagac
tcagatgagaacagtccagcgcccttaggtaaaattgtactgactgataaccccgacatt
gttataagagagttcacgcaagcccaggtaaatcatcacaaagtagcttacaagcctcca
gatgtggaactgggcatcactccaaaagtagctcagttcacatttactgttgaggacaca
gctggcaattcagctgatggactatttacaatttttctacaaccagttgacaacaaaccc
ccattcatcaccaacacaggattcactgttatggaaagaagtacgtatgttattaccaat
aaggagctctatgccactgacacggacacagatgatgaaaatattgtcttcactgtgacc
cagaatcctcaatatggacagctgcagtatttaggtgtttatatgtcaaatggtgaaaca
tttgtgcttgaagatattgcaaatggccgcctaacttacattcacggaggagaggaatca
ctcggcgatctcatcaaattttctgtaagtgatggtttccatgaggtacccattgtaata
cggatcaccattgagccagttgatgatgagaccccgacaattatgcttccagctggcctg
cttggagcctccattgacgtgctagaaaatggagcaacagagattacaagtaatgtcatt
caaggtcgagataaagacactgatgacctcatgctcacatttattgttgaggaacctccc
agattgggtgaaattctggtcaatggtgctcctgctgagagattcacccaggaggacatc
atcaatggaatggtggtctatgctcacacatctggggaaattggtccggtcaaaaagcat
gactctttcaacctaactctctcagatatgtctgatcagtgggttgttgggggcaacaaa
gtccagggtgtgacagttcatgtcaccatccttcctgttgacagcattcctcctgttgtt
agtgtcggggggcagtttgttgtggtggaaggtgagaagaatgtcattactttagataac
attcaagctgaggatgttgacaccaacaacgatgacatcttgtgcaccatcatcgtccaa
ccatcatctggttatgtggagaacatttccccagccacaggttctgagaaatcaagagct
gggactgccatcactgcctttaccatcaaagatattgctgttggtcatgtctactatgtc
caaagcattcataaaggagttgaacctgtcgaggatcagttcactttccgctgcactgat
ggtattaacttctctgaacgccacttccttcctgtagtcatcattccagccaatgatgag
aagcctgaaatttatgcacgagagtttgtagtattggagggcatgaatattgtaattgac
acaccaattctgaatgcagctgatgctgacatccctggggatgaactacactttgaaatc
attaaaaagcccaagcatggcacaataattcaacagcttagctctggcactatccctgtg
gagaagttcagcttggaacagatcaaagaggccgccaacattgtttatgaacacgatgac
tctgagaccaaaaaagacagctttgagatcaggctttctgacggcaaacacaaagtggaa
aaaacagttctcatcatggtcattcctgttgatgatgaaacaccaagaatggctataaat
gatggccttgatgttgagattggagagacaaaagtgatcagtaacagggttttgaaggca
acagatcttgactctgaagacaaagagttaacatatattgtgagatatggacccggtcaa
ggttaccttcagcgtattagcaaatttggtgatgttttaggaaacataaccctgggaatg
aattttacacaggatgaaattgacaagcaactcattcagtatgtgcacacaggtcaagag
ggcatccgtgacctgctgaaatttgatgttacagatggtataaacccacttattgaccgt
tacttttacatcaacattggaagcattgacatggtgttcccggatgtaatcaacaaaggt
gtgatgctcaaagaagggggaaaggtaactcttaccactgacctcctcagcactacggac
atcaacagtcctgatgagtatctcagctttagcattacaagagcacctagcagagggcat
ctagagtgcactgatcatccaggtgttcctatttctactttcacccagctacagctcgct
ggtaacaagatctactacatccacacttcggatgatgaggtgaaaatggacagctttgag
tttgaagtgactgatggttacaatccagtcttccgaaccttcagagtgtcaatcactgat
gtagacaataagaaacctgttctgactgtacacaagttggttgttgaggagggagaaacc
aaactcattaccccatttgagttgactgttgaagatcgggacacgcttgacaacctactg
cgctttacagtcacgcaggtgccagtgcacgggcagctgcttttcaacaaaacccaacca
attacgacctttaccaagcaggatctaaatgagaaccttatcagctataagcacgacggc
actgagaccaacgaggacagcttctctttcattgtgacagacggcactcatactgacttt
tatgtcttccctgatactgtatatgagactcgcaagcctcaaatgatgaccattcacatc
aacacggtggacaatggtgtgccccagattgtggttaacaaagctgctgcctcactgaaa
gtcctccacacaggacacctgggctttgttatcactagcaaggtcattcgatcagaggac
agagacagcccccagagagtcctgaagtatactgtgtctgaaccacccctgcatggcttc
atcatcaacactgcactgggcaacgacagcatcaagaccttcacacaagctgaaattaat
gaaatgaagatctgttatgtgctgttggacaggagcaacgccacaagtgatatcttctat
ttcacagttgaagacaatggtggaaacaaactcaaacctcagccgttccggctcaactgg
gcctgggtctccttggagcaggaatactacttggtggatgaagacgccaaattcttggag
gtgacgctgaaacgccgaggctacctgggagaaacctcctttgtcagtattgcaactaaa
gatggcacggctgagcaggacaaggacttccgtggtaaagctcagaagcaggtccagttc
aacccgggccagacgacagcaacctggaaggtgaagatcttcacggatcaggagtttgaa
atctccgagacctttgagattcacctgtcagaccccgtcatggcggcgctggagtatcca
gatataaccacagtggagattgtggaccctggagatgaatcaactgtcttcattccacaa
gctgaatttaagatagaggaggatattggagagctgttagtgccggtcaggcgttcagga
gatgccagccaggatcttatggtagtttgttacactcagcaaggcacagccactggcacc
gtccccaccactgtcctgtcctactctgactacatcacccggcccgaggaccacaccagc
gtgctgcgcttcgataaggacgaacgagaaaagatctgccgcatcatcatcattgacgac
tccctgtacgaggaagaggagagctttaacgttagcctcagtctgcccatgggtgggcag
gtgggagcccatttcccctccgccaaagtcacgattttggcggacagcgatgacgagcct
tccctgtactttggagaaccggagtatgtcgtggatgagagctcaggctatgtggaggtt
aaggtctggaggacagggaccgacttgtccaaaacagctacggtcactgtccgctccagg
aagagcgatcctgtttcggcagaagccgggcttgactacgtcggtatcagtcgtaacctg
gactttgctcctggagtgacgatgcagacattcagagtgaccatcttggatgacttgggt
cagccaaagctggagggacccgagacctttgaccttgtgctgaggatgcccatgaacgcg
gtgttaggggaaccgagcagggcgaccattaccatcaatgataccgtcactgacctgcca
aaggttcagttcaaggaaggaaactacaaggtggacgagtcggatggagatgtgagcgcc
acggtgtatcgcagcggagacatcagcctcatatccacagttcactgttacacccgccag
ggctccgctcaggtcatgatggactacagcgagaggccaaatactgacgcgtcagtcatc
acgttcctgccaggtgagtctgagaagcagtgtgtggtcagcctgatggatgactcagtc
cacgaggaggacgaggagttccgcttggtgctgggaagtcccaagagcaagtctccatat
ggagcctccgtcggggagcagaaggaagcgctggtcaccatcacagatgacaaagacaag
cccatcatccgtttttcggagatcaagtacagcgtgcgtgaacctcaggtgaaaggtgat
gtggcaatcgtgaagattcctattctgcgttttggagacacctctaaggtctcagtagtc
agagtgcacacaaaggatggctctgcaacctccggagatgactataacccactgtcggag
gatgtggtgttcaaggaggacgagagggagcattttgttgaaatcgagatcctgtacgac
ggtcagagagagatgagagaggccttcatcgtgcacatgaagcctgatgacaacatggtg
gctgaaatacagatgaacaaggccattgtgtacattgaggagatggacagtgtggcggat
gttacattccctgcagtcccccaggtggtgtccctgctcatgtatgacgacacatctaaa
accagagacaggccttacccgcccaatggataccctgtggtttgtgtgacggcctgcaac
ccaaagtaccatgattttgacaaaacgggttccatctgctctgctgagaacatcaacgac
acgctgacccagtaccgctggctggtgagcgctcccaccgaatcagatggagtgactagc
cccatgagggaggtggacactaacaccttcttcaccaacaccaagtcaatcaccttggat
tcaatctacttccaagccggttccagggttcagtgtgcagcgagggccttcaacaccaac
ggggatgctggcctggagctgtccagtcccattgttgtgattagtaatgacgaaggtatg
tgtcagcctcgaatcccaggcatcgttggggctgagcctttctctgctaagatccgctac
acaggcccagatgatccggacttccccaacctcatcaagctgaccatcaacatgcctcac
atggatggaatgctaccagtgatctccaccaaacctctgtcaaactttgagctaactctg
agcccagatggcacacgggtgggtaaccaccgctgctccaacctgctggacttcaatgaa
atccaaactggctacggcttcatcacagacgcgacaaagaaccccgaaatcatcggggag
acttcaccgtaccagtacagcacggttatgcgctcagccaactccctgcgcttctacagg
aacctcaacttagaggcctgcctctgggagttcaccagctactacgacatgtcagagctg
ctgaacgactgcggcggctccataggcaccgatggacaggtgctgaacctcgtccagtca
tatgtcactttgcgtgttcctttattcgtgtcctacgtcttccactctcccgtggccgtc
ggaggctggcagcactttgacctgcagtccgagctgaaactcaccttcgtttacgacaca
gcaatcctgtggcaggatggtatcggcagcccgccggaagctgaactacagggagccatg
taccccaccagcatgcgcataaacgaggagggccgcctcgtagtttacttcaagaccgag
gctcggttcaggggacagtttgttatgtctcacccaggaaccagtgtgtcgtccatggtg
atatgcgccgaccatcctgggctgacgtttacgctcgccctggtcaggactgagccgacc
tacaaccagcccatgcagcagtggagcttcatctcagattttgcagtacgagattactct
gggacctacactgtgaagctggttccctgcattgcatcacccaacggagagttcagcatc
cctcctgtgtgccacccaagagagccgcttacttttgatgtggacatccgcttccagcag
gtgagcgatccagtggcagctgaattcagtctaaacactcagatgttcctcctgtccaag
aaagagctttggttgtctgatggctccatggggtttggagaaggaacagatgctgctttt
tcagaaggctccacaatatatggccgagtgatggtagaccctgtccagaacctgggtgac
tccttctcctgcagcattgagaaggtgttcctctgcaccggagcagatggatacgtcccc
aaatacaaccccacaaacaaggagtacggctgcttggcagacgctccctctctgctttac
agattcaagattctggacaaagcccagccagagactcaagctccagcatttggggacatt
gcttttaaggccaaactggctcaagactaccctggagctcagcctttggtcagacagcca
ggctcagatggcttcatgctttcttcttcaccactttttcaggtggctgctggtagagaa
tggttcatccacaccatctatatggtccgctccaaagaaaacaccaaccgtaacatcggc
aagcgcagcgttgagtatctccaacacgggatctcctctgttgggcagcctcacgcctca
gatgcggctcgtcgccaccgccgggctgccccgtcgttctccggccaggttctgacccag
gacatcggcatcaaaaacaaccgtggcaccaacatccagcacatcgctctggaccggtca
gaccgcatagtggtcagtcagaggcaaccctggtccccgaaccatgagcccctcctggag
cgccccctgctggagagttcgggcagggagcctgcagacacctcctttctgcccatgctg
gtgggcatcgcaagtctgatccttctcgtctgcaccgtcgctaccatcgttattctgctg
ctgcggtgcaagaggagggaaaagaaaagccagttccctccgtacaccacttcctcctca
tctgcctacagtcacggcgcggcaggtatgtggagcagttccgacagctccgaagtctaa
DBGET
integrated database retrieval system
