Kryptolebias marmoratus (mangrove rivulus): 108230042
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Entry
108230042 CDS
T05608
Name
(RefSeq) DNA-binding protein RFX7 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108230042
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Other basic domains
RF-X
108230042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
108230042
NCBI-ProteinID:
XP_017261347
UniProt:
A0A3Q3BH40
LinkDB
All DBs
Position
LG11:12210506..12233870
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AA seq
1473 aa
AA seq
DB search
MADEQQQQQPGQKPASGLGSLPALVPGLQGPEANALQFKIKNSICKSVQSKVDSILQDVE
KFTDIEKLYLYLKLPSGPSSGNDKREGGFSPAGLCDQSSMSSSRTQQMYAFNWIRNHLEE
HPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSG
LRKKAFVHMPSLPNLDLQKSGDGCELMEPTGQSPSAEDEMRSAACGLVCEWAQKVLSRQF
DNVEDLARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTPASAFVPTAEANSFQPQVKTLP
SPSVDAKQQLQRKIHKKQQEQKLHSPLPMETQVKRTEASTPGPTIPCGSPALLSPQPTIG
IVVAAVPSPVTVQRSRQLMTSPSPVGTAEGKVLPVNFQVVTQSLKQSPKTPQNIPASPVG
DRLARHGTRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMPSPHVSSVNVVKMTAIAL
APSSSTTTVRPASAGVSTLAASDDSQQLQSGGSAAPQSPAVRPSAAASTPILSADTKGVS
EAGNDNNSTSVAEKHVGGAKEERVAKFRAASEPSFLVKCSPGPEKGVRMKIDSTSPPTST
AGTQDSNNSNCHDSTLYLTVDNQNSNGNSSSNGSSAVTPTSKDPCQDAKSPRKRAAGESH
VIPVKRVFITQQPLAVVDNPKPGVSAAVKRIPRSGTPARPESAPCKGTAKHTPTGPTQIF
ALTDAPLTHTEGTQTVVKQQDLLVKHEDPSISVDMNVGAAGSNTSDQALLQQITGDPRAI
PANSGPHEASVIELKSTIWETQQIPAEHKQDSSDQLSMIAQPSEASGQLNLAQEMVDFAG
SQSNMDYFPFNDDDMTQDSIVEELVQMEEQMKLKGLFINSVDVSLQGQSANGPGSILSTH
QASSTFYHSAHSSTTPVQTPTPTPTPTPTPTPTSEMTLTHTLTRESPCSRMAPITPVDGA
MGRHTPISTPLSNCSSSVPPSPVECRNPFAFTPINSSITGYHDASIVSSSPVKPMQRPMA
THPDKAKLEWINNRYNSISGGPLSNHSIGILPSYQDLVDDQFRKPHAFAIPGQSFQSQSR
QDAAHFGRLTPISPVQQQQQQQQQQQQITGVSTPTKQESFAVPAPLDNKASTSSTSTTFR
CRSVSPAVRQRNFSGNTGPPTPTTSTTTTTRAVDSPFNSPITSEVLSILSNSQTVSSVHS
IVQRSQSVPLTIMMQSEMLPVQGQSNTSKITNVLLSKMEADGDDAVRGLGINNLPSNYTA
RMNLTQILETTPSFAGGAAHQTQLPVSSSPAAFELQQHGYLTTSGGEQVNFSTGDSQAQM
GPGKQDQQQQQLQEDPVQTQPQLLLQSTQQQEVEDEQQQIDFNNTVKDLLGEDGLNPSSQ
LVGQVASELNAVVSDFSNDIRLTSDLSSSITDLNTLDPNLLFDPNQQQEQYEDSTLEELK
NDPLFQQICSDTVNSGFDWLESKDQPTTVEMLG
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgagcaacaacaacaacaacctggtcagaagcccgcctcgggattaggctcg
ctcccagcgctcgtgccaggactccaagggcccgaggccaacgcgctgcagttcaaaata
aagaattcaatttgcaaatctgtacaatcaaaagtggacagcatattgcaagatgttgag
aagtttacagacatcgaaaaactctacctctaccttaagttgccttctggtcccagcagt
ggcaatgacaaaagagagggggggttctctcctgctggattatgtgatcagagttccatg
tcgtcaagccgtactcaacagatgtatgcattcaactggatacgcaatcacctagaggag
cacccagagacgtccctcccaaagcaagaggtttatgatgaatacaagagctactgtgac
aatcttggctacaatccactgagcgctgcagacttcgggaagatcatgaagaatgtcttt
cctaacatgaaggcgcgtcgtctgggcatgaggggaaaatccaaatactgttatagcggg
ttgagaaagaaagcttttgttcacatgccatccctaccaaacctggatctgcagaaatct
ggcgacgggtgtgagctgatggagccgacgggccagtctccgagcgctgaggatgaaatg
agatctgcagcgtgtggactggtgtgtgagtgggctcagaaggtcctgagtcgtcagttt
gacaacgtggaggacctggctcgcttcctgctcaatagtcactacattggtacaaagtcc
atggctgcactcactgttatgactggaacacccacaggaatgaagaccccaactccagcc
tctgcctttgtgcccactgctgaggcgaactcattccagccccaggtgaagaccctgcca
tctccctctgttgacgcaaagcagcaattgcaacgcaaaatccacaagaagcagcaggag
cagaagctgcactcccccctgcctatggagacccaagtcaagcgaacagaggccagtacc
cccggacccaccatcccctgtggcagccccgctctgctgtcccctcagcccaccatagga
atcgttgtagcagctgtccccagcccggtcacggtacagagaagcaggcagttgatgacc
tcgcccagccccgtggggacggcagaaggaaaagtgttgcctgtgaacttccaagtcgtc
acccagtctctcaaacagtcccccaaaactccccagaacatcccagctagtcctgtaggt
gaccggctggcacggcacggtacgcggtacgcccagatcctgcccaagccctctgccacc
agtgccatcacgctgcgctctccgcccaccctgcttatcaccaacagccccataaaaacc
gtgatgccctctccccacgtcagctcagtgaacgttgtgaagatgacggccatcgctctg
gctcccagcagcagcaccacaactgtgcgaccggcctcagcgggcgtgagcaccttggct
gcgtcggacgattcccagcagttacagagcggcggttcggctgctccccagtctcctgca
gtcagacccagtgctgcagcctccaccccaatcctctctgcagacaccaaaggggtgtct
gaagctggaaatgacaacaactccacatctgttgcagagaaacatgttggtggagctaaa
gaggagagagtggccaaattcagggctgcgagtgagccaagcttccttgttaagtgttct
ccaggaccagaaaaaggggttaggatgaaaattgactccacgtcccctcccacctctaca
gctgggactcaggacagcaataacagtaactgccatgacagtactttgtacttgactgtt
gataatcagaactctaatggcaactcatcgtcgaatggctcgtctgctgttaccccaacg
tcgaaggacccctgtcaagatgccaagagccccaggaaacgtgcggctggggaatcccac
gtcatccccgtcaagagggtgtttatcacccagcaaccgcttgctgtagttgacaatccc
aaacctggggtcagtgctgcagtgaagaggattcccagatcaggaacccctgccagacca
gagagtgccccctgcaaagggactgcgaaacacacgcccacaggacccacacagatcttt
gcactcaccgatgctcccctcacacatacggagggaacacagacagtcgtcaaacagcaa
gatttgctggtgaaacatgaagacccttccatcagcgtggatatgaatgttggagcagct
ggaagcaacacgtccgatcaggctttgctgcagcagatcaccggggaccctcgtgccata
ccagccaactcaggaccacatgaagcctctgtgatcgagcttaagagcacaatatgggag
acacagcagataccagcagaacacaaacaagactcttccgaccaactttccatgatagct
caaccttccgaggcctcaggccagctcaacctcgcacaggaaatggttgactttgcaggt
tcccagtccaacatggactatttccctttcaatgacgacgacatgacccaggacagcatc
gtggaggagctggtccaaatggaggagcagatgaagcttaagggtctgtttattaactct
gtggacgtgtcccttcagggtcagtcggctaatggtccaggctcgatcctcagcactcat
caagccagttctaccttctaccattctgcccacagcagcaccactcctgttcaaactccc
actccgacaccaacgcctaccccgactccgacgcccacctctgaaatgacacttacgcac
accctgacaagagagagcccctgctcccgtatggcccccatcacccctgtggatggagct
atgggtcgtcacacacccatcagcacaccgctgtccaactgcagcagcagcgttccccca
agcccagtggagtgcaggaacccttttgctttcactcccattaactcgagcatcacaggg
tatcatgatgcaagtatcgtttccagcagccccgttaagcccatgcaacggcccatggca
acacaccctgacaaggccaaactcgagtggatcaacaaccgttacaacagcatctctggt
ggtcctttgtccaaccatagcattggcattctgcccagctaccaagacttggtagatgat
cagtttcgtaagcctcatgcatttgcaattcctggtcagtcatttcagtctcagtcgaga
caggatgctgctcactttggtcgcttaacgcctatttctccagtgcagcagcagcaacaa
cagcaacagcagcagcagcagataacgggtgtgagtactcctaccaaacaggagagtttt
gcagtgcctgctccgttagacaacaaggcttcaacctcatccacgtccactactttccgt
tgccgcagtgttagccctgcagtgcggcagaggaacttcagcggaaacactggtcctcca
acccccaccacgagcaccacgacaaccactcgagctgtggactcaccctttaactccccc
atcacgtctgaggtgctcagcatcctgtctaacagccagacggtcagctccgtccacagc
atagtccagcgtagtcagtctgtacctctgaccatcatgatgcagagtgagatgctgcct
gtgcagggtcaaagcaacacatccaagatcactaacgttctgctcagcaagatggaagca
gacggagatgatgccgtccgcggcctgggcatcaacaacctcccctccaactacacggct
cgtatgaacctcacacagatcctggagaccaccccgagctttgcaggaggagctgctcac
cagactcagctgcctgtcagctccagccctgctgccttcgagctccagcagcacggctac
ctcaccactagtggcggagaacaggtgaatttctccactggcgacagccaagcacaaatg
ggtcctggtaagcaagaccagcagcagcagcagctccaagaggatcctgtgcagacacaa
ccgcagctcctcctccagagcacacagcagcaggaggtggaggatgaacagcagcagatt
gattttaacaacactgtcaaggacttgctgggggaggatggcctcaaccccagttctcag
ctggttggtcaggtagcttcagagctcaatgccgtggtgtctgacttctcaaacgacatc
agactgacctcagatctgtccagtagcatcactgaccttaatacattggaccccaacttg
ctgtttgatcccaatcaacagcaggaacaatatgaagactcaacactggaagaactgaag
aacgacccgctttttcagcagatatgcagtgatactgtgaactctggctttgactggcta
gaaagcaaagaccagcctactacagtagagatgctgggttaa
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integrated database retrieval system
