Kryptolebias marmoratus (mangrove rivulus): 108230133
Help
Entry
108230133 CDS
T05608
Symbol
cntn1a
Name
(RefSeq) contactin-1a
KO
K06759
contactin 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108230133 (cntn1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108230133 (cntn1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
kmr00537
]
108230133 (cntn1a)
Cell adhesion molecules [BR:
kmr04515
]
Immunoglobulin superfamily
Contactins
108230133 (cntn1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
kmr00537
]
Others
108230133 (cntn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
C2-set_2
V-set_CD47
fn3_2
Motif
Other DBs
NCBI-GeneID:
108230133
NCBI-ProteinID:
XP_017261572
UniProt:
A0A3Q3A924
LinkDB
All DBs
Position
LG11:complement(9977713..10046223)
Genome browser
AA seq
1019 aa
AA seq
DB search
MLRLLLLLHLLVLSLSPEGALAHEEVPDLDEDEVTGFGPEFEEQPVDTIYPEESPEAKII
MSCRARANPIATYKWKLNNREIDLSREGSSYSLSGGNLVISNPIRTQHVGNYSCMAINMF
GTVISREASVQFGYLDFFSLEERGTVFVKEGQGAVLLCAPPPHYPGGLSFRWMLNEFPTF
IFLDKRRFVSQITGNLYISKVDPSDRGNYSCMVSSPSSSKSVFSNYIPLNPLAERPIRKY
PADLRVKFPTTTALVGQNITLECFALGNPVPDISWKRVGKGMPNNHEVRMAGAQLYLYNV
KFDDSGTYRCEAVNSKGKDFHHADVSVEAFPEWVEYISNTERDIYSSFTMSCIAKGEPKP
QIRWLKNGKPIDRKEIRFSRLTFHDSGMYQCIAENRHGVIFANAELRVIIRAPSFKRHPV
NNVLAPKNGRVVIECRPKAAPKPTFYWSKDTELLSNSTRMFIWLDGSLEILNVTRADEGR
YTCFAENDFGKANNTRPLLVTESTKITLAPSNADVNVGENTWMQCAASYDPLVDITFVWS
LDGREIDLHKDGAHFESILNGSSNSKLLIKNVKLKHAGQYTCTAKTQVDNITASAHLVVR
GPPSPPGGVQIINKTEKSVTLQWSRGADHHSPISKYTIQYRDQFSKDVWKIATTSPADIE
GNTETAIVMNLFPWTEYEFRVIATNTLGTGDPSKPSPKDRTQESVPVVAPSDVGGGGGAS
RELTINWTPVQPQYYYGTNFGYIVAFKPHDEFEWKRVAVADPEAKHYVHKDPNIAPLTEF
EVKVKAFNSQGEGPYSLTAIIHSAQDAPSEAPGSVEGRALSATTATVSWNPLPQVNIDGY
QIKFWRNHEDSEGGARRAGVPAKENHTKLEGLRPNSEYLVEVRGYNSAGYGPPSKHIKIH
TKKPPPDRPPKIISKKLKGQFLNIAWEEVESLNNESSIDGYRVLYKQKGHNEPTLYTTSK
RHIELPLPIDEDHMVEVRAHTEGGDGAVAQISMKDGGIIPTVSLRVSSLLLVVLLLLNI
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcctcctcctgctcctccatctcctcgtcctctcactctctcctgaaggtgct
ttagcccacgaggaggtgcctgaccttgacgaagatgaagtcacaggttttgggccggag
tttgaggagcaaccggtggacaccatctaccccgaggagtcacctgaggccaaaattatc
atgagttgccgggctagagccaatccaattgccacatacaaatggaaactgaacaacagg
gaaattgacttgagtagagagggaagcagctacagtttatctggaggcaacttggtcatc
agcaaccccatcagaacccaacatgtgggaaattactcctgtatggcgatcaacatgttt
ggcacagtcatcagccgagaagcatctgtccagttcggatacctagattttttctcattg
gaggagagggggacagtgtttgtcaaggagggccagggggctgtcctgctctgtgcaccc
cctcctcattatccaggcgggctgtcatttcgatggatgctcaatgaattccccaccttc
atctttctggacaagcggcgatttgtctcccagatcacaggcaacctgtacatctctaag
gtggacccatcagacaggggcaactactcctgcatggtatccagcccatccagctctaag
agtgtgttttccaactatattcccctcaatcctctggctgaacgtcccatcaggaaatac
ccagctgacctcagagttaagtttcccaccaccaccgctttggtgggacagaatatcacc
ttagaatgcttcgctttggggaaccctgtacctgatatttcctggaaaagggtaggcaaa
ggcatgccgaataaccatgaggtgcggatggcaggtgctcagctgtatctctataatgtc
aagtttgatgacagtggcacctatagatgtgaagcagtcaactcaaaaggaaaggacttc
caccatgcagatgtgtctgttgaggcttttcctgagtgggtggagtacattagtaacaca
gagagagacatctatagcagcttcacgatgtcatgcatagccaaaggtgaaccaaaacca
caaatccgctggctgaaaaatggaaaaccgattgatagaaaagaaattaggttcagccgg
ctgacatttcatgattcagggatgtaccagtgcatcgcagagaatcgccacggagttatt
tttgccaacgcggagctgcgagtgatcattcgtgctccatcgtttaaacgccacccagta
aataacgtgctggcacctaaaaacggtcgtgttgtgatcgagtgccgaccaaaagcagct
ccgaagcccaccttctactggagcaaagacacagagctgctgtccaactccaccaggatg
ttcatctggttggacgggagcctggagatcctcaatgtgacgcgagcagacgagggcagg
tacacctgttttgctgagaacgactttgggaaagccaacaacactcgtcctctactggtc
acagagtccacaaagatcaccttggcaccatctaacgcagatgttaacgtgggggagaac
acctggatgcagtgtgcagcatcatatgacccactggtggacatcacttttgtctggtcc
ctggatggaagagaaattgacttacacaaggacggtgcacattttgaaagcatcctgaat
gggagttcaaatagcaagctgctgattaaaaatgtcaaactgaagcacgccggacagtac
acctgcactgcaaagacccaggttgacaacatcactgcctctgcccacctggttgtcagg
ggtccccccagtcctccaggtggagtacaaataataaacaaaactgagaagagcgtgacg
ctgcagtggagccgtggagcagaccaccacagcccgatctccaaatatactatccagtac
agagaccagttctccaaagatgtctggaagattgccactacatctccagctgatattgaa
gggaatacagagacagccatcgtgatgaatttgttcccctggacagaatatgagttcagg
gtcattgccaccaacactctggggacaggagatccaagcaagccatcacctaaagacaga
actcaggaatcagttcctgtggtggcgccctcagatgtcggcgggggtggaggtgccagc
agagaactgaccatcaattggacgccggtacaacctcagtactactatgggactaatttt
ggctacattgtggcctttaaaccccatgacgaatttgagtggaaaagggtggcagtagct
gaccctgaggccaagcattatgtccacaaagaccccaacattgctcctctgacagagttt
gaagtcaaagtgaaagcgttcaacagccaaggagagggaccctacagcctcacagccatc
attcactccgcacaggatgcgccgtctgaagctcctggaagtgttgaaggtcgagctctc
tctgccacaacagctacagtctcctggaatcccctcccacaggttaacattgatggatac
cagataaaattctggaggaatcatgaagacagtgaaggtggggctcgaagggcaggtgtg
ccagccaaggaaaaccacactaaactcgagggtttaaggcccaactcggaatacctcgtt
gaggttcgaggctacaactctgcaggatacggcccacccagcaaacacattaagatccac
accaagaaacctcctccagaccgacctccaaaaataataagtaaaaagctaaagggccag
tttttgaatattgcctgggaggaggtggaatcactgaacaatgaatcatcaatagatggt
tacagagtgctgtacaagcagaagggccacaatgaacccactctgtacacaaccagtaag
cggcacatagaactccccctgcctatagacgaggatcacatggtggaagtccgggcgcac
acagagggaggagacggtgctgtggcacaaatcagcatgaaagatggaggcatcataccc
accgtatctctcagggtatcctcccttctcctggtggttctcctcctcctgaacatttga
DBGET
integrated database retrieval system
