Kryptolebias marmoratus (mangrove rivulus): 108230160
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Entry
108230160 CDS
T05608
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108230160 (dennd4a)
Membrane trafficking [BR:
kmr04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108230160 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
Papo_T_antigen
PPR
Motif
Other DBs
NCBI-GeneID:
108230160
NCBI-ProteinID:
XP_017261635
UniProt:
A0A3Q3B9J7
LinkDB
All DBs
Position
LG11:13595083..13621553
Genome browser
AA seq
1686 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDSSKPLEEDLHFDDAGTKSVKPKAPITDVAVVIRSLGEEVP
PGFTCVESTPSGLSAELNGASLRGPQIFLCYKRGRDKPPLTDLGVLYEWKEKLKPGCHIV
QSTPSGRPANISSSSSQRIYITYRRSPKSQPHTSLAVTNVCVIIPGKGETPPHTFCKVDR
NLNSSMWGSSVYLCYKKSLAKANTIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGAMI
ECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEENLSERQRSQLGLPSSDFGP
DGTRNVYSNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHAVPIEKHISHFMQNVPFPST
QRPRILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGLDSRYFDLYVPP
ADISCVDLDTNTISQKDDKKALTWKILPRRACKHLLNSLNKLHQQLTEGGQLNRDDVQMD
HTMTDSELYGGKSLHTLELEIQEAFLRFMAAILRGYRSYLQPITQAPSEKTTDVSSLFDL
QGFVKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECVDKLFTTGIKIDS
ERPEDARLIELDESHRSEHTVYINPPELPPLPQGEEHPLCYSYSGFPVLRSELLEPLEGL
NPLSTGIASRHSSPASPTAIFRRSKQEIKSAQKMAKTYSSMPQMWSKCLLRHCYGLWFIC
LPALVSNCHSKVRALRTAYDVLRNMQDKKLQAPDEVCYRVLLHLCGQYSQPVLAVRVLFE
MKKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVILGVLRFKQAGRKQQTPH
RDPQLSDGSDLDTVSHGSLDSANDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSK
EEERLCSRETDTSTPGEDKGLRQINSGTRGISSPSSDNPPCAERPKSLDLFGGQGCVRLA
VPLLSSARQNQLGADRLHEVEEEDAEAEKHKPLVEGGVSCSTGAARTGIEAGFDPLSQMA
TATEKECDRVSNSSPATNRNLVEEIETYINNSSPLSSRTPSMDFQNPSSPLFCSTLSAQA
SPQATALAHSSTHLSLPVKSKDRLRQSPSLPLGMCNRDRERPSSLISPSSPTPSSSSFSM
DSLLTPTLDIFKSSVISAGKGVAEKASRLYSRLSSQTSLTQDGNCDRMSVSSLTSAEAEC
SSLHDNDSCLDPHGFTSPQHGSMSRARRSPVGAHQTNLSSPSSPNRVFRHNSFSGGLALP
SKAPHTPDSSPDVSRFQPTPNYTVEVLMSSCSLCKTCDCLVYDEEIMAGWTANDSNLNST
CPFCGTAFLPFLNVEIKDLRPQNRSLKKSNPVKEEDASAALSPEASVADCAAQPSAASSQ
ESSWSAGTSAPAPDPVTVPYLSPLVLWKELESLLVNEGDQAISSPSVVDQHPIVFWNLVW
YFRRLELPSNLPALILASQHCSHRDQPPQSVSSEDSKQVLVRIMWDNLKLHKDKLQPCYV
LWNTHCANSLIRSGLCEEGQLFTVELLQSFVRSIKKSDVYQPMSQIIQLLGPELGFKRQR
SLYRDLLFLTLVALGRNNININAFDREYRLAYDRLTSSQVKLTHNCDRPPGAGVMECRRT
FGEPSL
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaaggccctcgcgtagccgactactttgtggttgctggcctcaccgat
tcgtccaagcctctggaggaggatctgcacttcgatgacgccggcaccaagtctgttaaa
cccaaagcccccatcaccgacgttgctgtggtgatccgctccctcggcgaggaggtgccc
ccgggcttcacctgcgtggagagcaccccctcaggcctctccgctgagctgaacggagcc
agcctcaggggcccgcagatcttcttgtgctacaagagaggcagagataagcctccactg
acagacctcggagtcctgtatgagtggaaggagaagctgaagcctggatgccacatcgtc
cagagcacgccctcaggtcgccccgccaacatcagcagttcatcctcgcagcgcatctac
atcacctaccggcgttctccgaagagccagcctcacacctccctggctgtcaccaatgtc
tgcgtcatcattcccggcaagggggagacgccccctcacaccttctgcaaggtggacagg
aacctcaacagcagcatgtgggggtcctcggtctacctttgctataagaagtctcttgct
aaagcaaacacaatcgcatacaaagcaggtttgctgtgtaggtaccccgaggaggactat
gagtcgttcccactgcctgagtcagtgcctatgttctgcctgcccatgggggccatgatt
gagtgctggccagctcataccaaacactccctgcccgttttttctacgttcgtactgacg
ggggcctctggagaaaaggtgtacggagcagccatccagttttatgagccttaccctgag
gagaacctgtcggagcgtcagcgctcccagctcggcctgccaagctctgattttggacct
gacgggaccagaaacgtttacagcaacaagagcatctgcttactctcccactggcccttc
ttccagtccttcaggagctttctaactttcctctacagatattccatctccggaccacat
gcagtcccgattgaaaaacacatctctcacttcatgcaaaatgtcccgtttccctccact
cagaggccacgcatccttgtgcagttgtctccacatgacagcctcatactgagccagcct
gtgtcctccccactgcctcttagcggtgggagcctctccacgttactgctgaatctgggc
ccgaagaacgccgccaccctgcttgttttggccgtcacggagcacaagatcctggttcac
tccttgcgtccggcggttctcaccagtgtcaccgaagcccttgtgtctatgatctttccc
ttccactggccgtgcccgtacatccctctgtgcccgctggccctggcagatgtgctcagt
gcaccttgccctttcattgtgggtttggactccagatactttgacctttatgtgcctcca
gctgatattagctgtgtcgatctggacaccaacaccatctcccagaaagacgacaagaag
gctttaacgtggaaaatcctgccccggagagcctgtaaacatcttctgaatagcctgaat
aagctccatcagcagctcacagagggcggtcagttaaatcgcgatgatgtgcagatggac
cacacgatgaccgacagcgagctttacggggggaaaagcctccacactctggagctggag
atccaggaggcctttctccgattcatggcagccatcctacgaggctaccgctcctatctg
cagcccatcacccaagctccgtctgagaagacgactgacgtcagctcgcttttcgacctg
caaggcttcgtgaagagcagagaccgctcccatcagaggttttactccctcatgaccaag
acgcagatgttcagtcgtttcatagaggagtgctcctttgttagtgataaagatgccagc
ctggctttctttgacgaatgtgttgataagttgtttactactggaatcaagattgacagc
gagcggccagaggacgccaggctgattgagctggacgagtcccatcgcagtgagcacacg
gtctacatcaaccctccggagctgcctcctcttcctcagggagaagaacaccctctgtgc
tatagctattctgggttccctgtgctgaggtctgagctcctggagccactggaaggactt
aatcctctgtcaacagggattgcttcacgccacagcagcccagccagccctacggccatc
tttaggcgctctaaacaggagatcaaatcagctcagaagatggccaaaacgtattcgtct
atgcctcagatgtggtccaagtgtctgcttcgccactgctacggcttgtggtttatctgc
ttgccggcacttgtcagtaactgccactccaaggtgcgagctctgcgcacagcctatgat
gtgctgaggaatatgcaagacaagaagcttcaggctccagatgaggtgtgttatcgtgtg
ctgctgcatctgtgcggtcagtacagccagccggtcttggctgtcagggtgctgttcgag
atgaagaaggcgggagttcagcccaacgcaataacgtacgggtactacaacaaggcggtg
ttggagagcacttggccctccaccaccagaggaggctactttctgtgggggaaactgagg
aacgtgatcctcggtgttctccgcttcaagcaagcagggaggaaacagcagacgccacac
agagacccccagctttcagacggcagtgatctcgacacggtcagccacggcagcttggac
agcgctaatgactctgctgagcgcacctccatcgacaccgacttcaccaagatggactcg
agtgacgacggatttagtacgggtggacagtctgaccaaggctacgactccctgtccaag
gaggaggagaggctgtgcagcagagagactgacacctcgacaccaggggaagacaaaggc
ctcaggcagatcaactctggcaccaggggcatttccagtccatccagcgacaatcctcct
tgtgctgagaggcccaaatctctggacctgtttggtggacagggatgtgtgagactcgct
gtcccgctcctcagctcagccaggcagaatcagcttggagctgacagactgcacgaagtg
gaggaggaggatgcggaggctgaaaaacacaagcctctggtggagggcggtgtcagctgc
agcaccggggctgcgaggacagggatcgaggcggggtttgatcccctgtcccagatggcg
acggcgacagaaaaggagtgtgacagggtcagcaacagctcacccgccaccaaccgcaac
ctcgtcgaggagattgaaacctacataaataacagcagccccctgagcagccgcacgccc
agcatggactttcagaacccttcgagcccgttgttttgctccacactttctgctcaagca
tccccacaggccaccgctctggcccactccagcacacacctttcacttcctgtcaaatcc
aaggacagactcaggcagtcgccatctcttcctctggggatgtgtaacagagaccgggag
aggccttcctcgttgatttcaccatcgtcaccgactccctcctcctcgtcgttctcaatg
gactccctgctgaccccaaccctggacatcttcaagagcagcgtcatatcagcagggaag
ggcgtagcagagaaagcgagtcgcctctactcccgtttgtcctcccagacttcattaaca
caggatggaaactgcgaccgaatgagtgtttcctcgctgacctcagcagaagccgaatgc
tcctcgctgcacgacaacgactcctgtctggacccgcacggcttcacttcccctcagcac
ggcagcatgtcccgggccaggagaagccccgtcggtgcccaccaaacaaacctgagcagc
ccgagcagccccaaccgagtgttcagacacaactccttctctggtggtttggcacttcct
tccaaagctcctcacactccagactcctctcctgatgtcagccgcttccaacccacccct
aattacactgtggaggtgctgatgtccagctgttcactctgtaagacgtgtgactgtctg
gtgtatgatgaggagatcatggcagggtggacagcaaatgactccaacctcaacagcacc
tgccctttctgtggaacagcattcctgcctttcctcaacgtggaaatcaaagatctcaga
ccacaaaacaggtctttaaagaaaagtaatcctgttaaagaggaggacgcgtctgcagcc
ctcagtcctgaggccagcgtggcagactgtgcagctcagccatctgcagcttcatcgcag
gagagcagctggagcgccggcacgtctgctccagcccctgatccagtgacggtgccctac
ctgagccctctggttctgtggaaggagctggagagcctgctggtgaacgagggcgaccag
gccatctcctccccgagcgtcgtcgaccaacaccccatcgtcttctggaacctggtgtgg
tacttcaggaggctggagctgcccagtaacctgccggctcttatcctggcctcgcagcac
tgcagccacagagaccagcctcctcagagcgtttcatcggaggacagcaagcaggtgctt
gtgaggatcatgtgggacaacctgaagttgcacaaagacaaactccagccctgctacgtc
ctgtggaatacacactgtgccaactccctgatccgctccgggctgtgcgaggagggccag
ctcttcaccgtggagctgctgcagagcttcgtgaggagcatcaagaaaagtgacgtctat
cagcccatgagccagatcatccagctgctggggcccgagctgggcttcaagaggcagagg
agcctctacagagatttactgtttctaactctcgtggctttggggaggaacaacataaat
atcaatgctttcgaccgggagtacaggttggcctacgaccgcctcacttccagccaagtg
aagctgacacacaactgtgaccggccccccggagcgggggtcatggagtgcaggaggact
tttggagagcccagtttgtga
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integrated database retrieval system
