Kryptolebias marmoratus (mangrove rivulus): 108230198
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Entry
108230198 CDS
T05608
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03420
Nucleotide excision repair
kmr04115
p53 signaling pathway
kmr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108230198 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
108230198 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
108230198 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108230198 (ddb2)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108230198 (ddb2)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108230198 (ddb2)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108230198 (ddb2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EML
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
108230198
NCBI-ProteinID:
XP_017261708
UniProt:
A0A3Q3BD24
LinkDB
All DBs
Position
LG11:complement(13105498..13111350)
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AA seq
497 aa
AA seq
DB search
MRNKPAKSESLEPKSKAKKKKASEDPGPTVSKKLRGKKDGGTSEPGPPLKSAGVQRKNGL
GSILHYIYKSTLGQSLHSQMRQCLQEPFVRSLSSYHFHGSSSPFDRRITCLEWHPTHPTT
LAAASKGGDVLLLDITNPAAKTFIQGNGAGDFIGGMKFCPTDCSKVYLASGEGTLTLKSF
EGHAPTLLSRTGDCDHEHHDVCFWYCCVDVSMNRQMLVTGDNMGQLVLLGLDGQKIFSDK
LHKAKVTHAEFNPRCDWLLATASVDHTVKLWDLRNLKDKKSFLHELPHDKAVNSAYFNPS
DCSKLLTTDQHDQIRVYASCDWTKPQQIIQHPHRQFQHLTPIKATWHPMYDLVVAGRYPD
DRICPGDQRTIDIFDSSSGELVFQLFDSSASGIKSINKFSPMGDTIGSGMGLTLLVWDRD
ESLLGDRHKPHAETPTSSDSLRGPQRSQQRSQRRSSKERKGSAADAKLKKKLTSLEETET
KTKTGCTKQKQAQTKKK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacaagcccgccaagtcagagtcgctcgaaccaaaaagtaaagcgaagaagaaa
aaagcctcggaggacccgggtcccaccgtgtctaaaaagctgcgaggcaaaaaagacgga
gggacgtccgaaccagggccccctttaaagtctgcgggagtccagaggaagaatggcctc
ggcagcatcctgcattacatttacaagagcactctgggccaaagtctgcactctcagatg
agacagtgtctccaggagcccttcgtccgctctctgtcctcctaccatttccacggctcc
agcagcccgtttgaccgcaggatcacctgtttggagtggcaccccacccaccccaccacg
ctggccgcagcctccaaaggtggagacgttttactgttggacatcaccaacccggcagct
aaaactttcattcaagggaacggagcaggagacttcatcggagggatgaagttttgtccc
acagactgttccaaagtctatttggcttctggggaaggcacgctcaccctgaagagcttt
gagggccacgcacccactctgctgtccagaactggagactgtgaccacgaacatcacgat
gtttgcttttggtactgttgtgtcgacgtgtccatgaatcgacagatgctcgtcaccgga
gacaatatgggacaactcgtacttcttggtttggatggccaaaagattttcagcgacaaa
ctgcacaaagccaaagtgacccacgcagagtttaaccctcgatgcgactggttgctggcg
acggcctcggtggaccacacggtgaagctctgggacctgaggaacctcaaagacaagaaa
agcttccttcacgaattacctcacgacaaagccgtcaactcagcctatttcaacccgtca
gactgctccaagttgctcaccacggatcagcacgaccagatccgcgtttacgcttcctgc
gactggaccaagcctcagcagatcatccagcacccgcacagacagtttcagcacctcacg
cccatcaaagccacatggcatcccatgtatgaccttgttgttgctgggcgctaccctgat
gaccgtatctgccccggcgatcagagaaccatcgacatctttgactccagcagcggggag
cttgtgtttcagctgttcgactcttctgcctcagggatcaaatctatcaacaaattcagt
ccgatgggtgacacgattggatctggcatgggtctaacgctgctggtgtgggaccgcgac
gagtcgctgctcggcgaccggcacaaaccgcacgcagaaacgccgacttcgtccgattcg
ttaaggggtccgcagaggagtcagcagaggagtcagcggcgctccagcaaggagcggaaa
ggttcggctgcagatgcaaagctcaagaaaaaactcacttctctggaagaaaccgagacc
aaaaccaagacggggtgcactaaacaaaaacaagctcagaccaagaagaagtaa
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