Kryptolebias marmoratus (mangrove rivulus): 108230271
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Entry
108230271 CDS
T05608
Name
(RefSeq) neurofilament heavy polypeptide
KO
K18343
ubiquitin thioesterase otulin [EC:
3.4.19.12
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108230271
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108230271
Ubiquitin system [BR:
kmr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
108230271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C101
Peptidase_C65
Motif
Other DBs
NCBI-GeneID:
108230271
NCBI-ProteinID:
XP_017261825
UniProt:
A0A3Q3AVX4
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All DBs
Position
LG21:complement(13177331..13185961)
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AA seq
708 aa
AA seq
DB search
MGSCCCKADYPCGSGEETSVLLKDDSKTTCISEKVAVDTCVLQGDDEMRGADEKAEKPEV
KQQTLESSATQENGLLQKENAPVSPRSESEVREDATTAQPEQSGAAPASGGNLPENASTA
HGEDVLGPVTKQEPHEEEDPASAQGISPSTEAVRPESPSHTETQNTSTEHTAASISPADG
QEGRSEEAKPSGAFAQDDDVLPVPNPELAAAAGQAASVSEVPLETNTEAPGCAVTVGLDD
GGSPCKEDGSVETKKHGAFWSFPSGPEPAGLDPSEEKLDSGGCERNTEATSPAAAKSSLS
FDKDEKPSPEGSGAVDFKEVTSSEKPKQDAAEETAPDTQDKDVPEMKEDDGLKEEEEGAR
TETGTTQPKEGPQNQEVTENKDELASDVSANDEPATEEKGSLGNSEEDLYRGAEELSLSQ
VLKMEDRCSLSPAVDILSYSEREWKGNTAKSTLIKKGYKEMSQTFDGVRRVRGDNYCALR
ATLFQVLSQSTTVPRWLQEDDVVTLPKQLEAQEGLVSQWRFPEVCVQRDGSGGDAAQQLK
GYIELLRNTWQAAVDCPTSAERQKLCERVFQGGEEELGLLEALKLLMLGRAAELHGCMLG
GGDVPLFCWLLFARDSSDCPRSFLSNHLRHVGLSAGLEQVEMFLLGYALQHTIQVYRLYK
ANTEEFITFYPDDHKDDWPSVCLVTEDDRHYNVPVVEAAEPNEELASS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggggtcctgttgctgtaaagctgactatccctgtggcagtggggaggagacgagcgtt
ttactgaaagatgactcaaaaaccacatgcatcagtgaaaaagtagcggtcgacacttgc
gttctccaaggggatgacgaaatgaggggagctgatgagaaagccgagaagccggaggtg
aagcagcagacgctcgagtccagtgccactcaggaaaatggacttttacaaaaagaaaac
gctccagtttctccaagaagtgagtctgaggtcagagaggacgccaccacagcacagccc
gagcaaagcggagccgctcccgccagcggtggaaacttgccggagaacgccagcacggct
cacggcgaggacgttctaggcccggttacgaaacaggaaccacatgaagaagaagatcca
gcctcagcgcagggtatttcgccatcaactgaagcagtccgccctgaaagcccctctcat
actgagacacaaaacacatcaacggagcacaccgcagcgagcatttctcctgctgatggt
caggaagggcggtccgaagaggccaaaccgtcgggagcgttcgctcaggacgacgacgtg
ctacctgtgccgaacccggagctcgctgcagcagcgggtcaggcagcgtccgtctctgag
gtccctttggagacaaacacagaggctcccggctgtgctgtgacggtgggtttggacgac
ggtggctctccgtgcaaggaggacggttctgtggagacgaaaaagcacggagccttctgg
tcttttccttccggaccggagcccgcaggactcgacccgagtgaggagaaactggactct
ggcggctgcgagagaaacacagaagccacatcgccagcagctgccaaaagcagcttgagc
ttcgataaggatgaaaagccaagtcctgagggttcaggcgccgtggacttcaaagaggta
acttcctccgagaaacccaaacaggatgctgcggaggaaactgcgccggacacgcaagac
aaggatgttcccgaaatgaaggaggacgatggactgaaggaggaagaggagggtgctcgg
acggagactgggacgactcagcccaaggaaggtcctcagaaccaggaggtgacggaaaac
aaagacgagctggcctcagatgtctcagccaatgacgagcctgcgactgaagaaaaaggc
agtctggggaacagtgaagaagacctgtacagaggagctgaggagctgtctttatcacaa
gttttaaagatggaggacagatgcagtttgtctccggctgtggatattctgtcctacagc
gagagagagtggaaaggaaatacggccaaaagtaccctcattaaaaagggttataaggag
atgtcccagacgtttgacggcgtgaggcgagtgaggggggacaattactgcgccctcaga
gccacgttgttccaggtgttgtcccaaagcaccacggtgccgcggtggctgcaggaggac
gacgtcgtaacgctgccaaagcagctggaggctcaggaaggactggtaagccagtggaga
tttcctgaagtgtgcgtgcagcgcgacggctcgggaggggacgccgctcagcagctgaag
ggctacatagagcttctccggaacacgtggcaggcagcagtggactgtcccacatccgcg
gagagacagaaactgtgcgagcgagtgtttcagggcggagaggaggagctcgggctgctg
gaggcgctcaagctgctgatgctgggccgagcggcggagctgcatggctgcatgctggga
ggcggagacgtccctttgttctgctggctgctgtttgctcgggactcgtccgactgtcca
cgttcttttctctccaaccacctcaggcatgtgggcctcagcgccgggctggagcaggtt
gagatgttcctgctcggctacgcccttcagcacaccatccaagtttacagactgtacaag
gcgaacacggaggagttcatcaccttctacccagacgaccacaaggacgactggccgtcc
gtgtgtctcgtcacggaggacgatcgccactacaacgttccagttgtcgaagctgcagag
cccaacgaggagctcgcctccagctga
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integrated database retrieval system
