Kryptolebias marmoratus (mangrove rivulus): 108230333
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Entry
108230333 CDS
T05608
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108230333 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108230333 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
kmr00536
]
108230333 (shha)
Peptidases and inhibitors [BR:
kmr01002
]
Cysteine peptidases
Family C46: hedgehog family
108230333 (shha)
Glycosaminoglycan binding proteins [BR:
kmr00536
]
Heparan sulfate / Heparin
Morphogens
108230333 (shha)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
108230333
NCBI-ProteinID:
XP_017261909
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Position
LG21:14324898..14332538
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AA seq
314 aa
AA seq
DB search
MLLWTRIALAGLICLSLVSFGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEEKTGADRMMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAGKGNATRMAAVFASRVRPGQQGLVAATVTRIYTQEREGSFAPVTAQGTLVVDQ
VLASCYAVIEDHQLAHWALAPVRLAHRASSMLFSSGPRVGAQSDGVHWYSKVLYQLGTWL
LDSHALHPLGMSPS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatagctttggccggtctcatctgcttgtccttggtgtccttt
gggatgggatgcggaccgggcagggggtacggtaggagaaggcacccgaagaagctgaca
cctctcgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcgagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaggagctgacgcccaattat
aacacagacatcatcttcaaggatgaggagaagaccggtgccgacaggatgatgactcag
agatgcaaagacaagctgaactctctggccatctcggtgatgaaccagtggcccggggtg
aagctccgggtcaccgagggctgggacgaggacggacaccacttcgaggagtccctgcac
tacgagggcagggccgtggacatcaccacgtcggacagagacaagagcaaatacggaacc
ctgtccaggcttgcggtggaggccggcttcgactgggtctactacgagtccaaggcgcac
atacactgctccgtgaaagcaggtaaaggcaacgccacgcggatggcggcggtgttcgcc
agcagagtccggccggggcagcaggggctcgtggccgcaaccgtcacacggatttacacg
caggagcgcgagggctcgttcgcgccggtgacggcgcaggggacgctggtggtggaccag
gtcctcgcgtcctgttacgcggtgatcgaggaccaccagctggcgcactgggccctggcg
cccgtcaggctcgcccaccgggcgtcctcgatgcttttcagctccgggcctcgggtcggc
gcgcagagcgacggggtgcactggtactccaaagtcctgtatcagctggggacgtggctc
ctggacagccacgcgctccatccgctcgggatgtccccgagctga
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integrated database retrieval system
