Kryptolebias marmoratus (mangrove rivulus): 108230346
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Entry
108230346 CDS
T05608
Symbol
zbtb47b
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 47
KO
K10518
zinc finger and BTB domain-containing protein 47
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108230346 (zbtb47b)
04121 Ubiquitin system [BR:
kmr04121
]
108230346 (zbtb47b)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108230346 (zbtb47b)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108230346 (zbtb47b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-Di19
BTB_KLHL33
DNA_pol_phi
zf-C2HC_2
zf-C2H2_8
zf-C2H2_15
zf-MYST
Motif
Other DBs
NCBI-GeneID:
108230346
NCBI-ProteinID:
XP_024859615
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All DBs
Position
LG21:complement(15769434..15788856)
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AA seq
726 aa
AA seq
DB search
MLIVEKTTDFPSAEFSLVEDVALHFTCLMDRLNEQRLFQPGLCDVDIVLVHHRSTFPAHK
GVLAAYSPFFHSLFAQSKQLRRVDLSLDALTSQGFQQILDFIYTSKLLVSSSTVGEVLDA
ATLLQMSDIAASCRDLISSHLLGAAGRDMADPEEPGAVAASPGQLYREIKQESELGRVYA
RDGGGPFSVRVEELGKSASQAEQYYQEERGSGGVAGAGVAANGEESKAADGHPSFNRDQI
IVEVNLNNQTLNVSKGLEGKSATVTDSMFGCCHGDERDADGDEDNEAESNEAGEEDAEDL
KRGDVLGRSSEEEEEEDEEEEENTLNIPGLEQLIVLDRPRRGAAALTIAGAAAAMRQTLA
EATLANRRRSGRGPPDGEGPGPKARLEEKQHFACRKCPRVFNNRWYLEKHLNVTHSRMQI
CSHCGKRFLLESELLLHQQTDCERSIQCATCGKAFKKLWSLHEHNKIIHGYAEKKFSCEI
CEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFKCENCSER
FQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSR
PNMKRHRRTHTGEKPYPCEVCGQRFRFSNMLKAHREKCFHVTNPSPVSSSGDPPAADSSA
QAPXXXXXXXXXXXXXXXXXXXAAPQLLHANHLSLPLLRSMGALPPASHLPPPPPLFSAG
RMNSDN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgctcatagtggagaagaccacagacttcccctctgctgagttctctctggtggaggat
gtggctctgcacttcacctgtttgatggaccggctgaacgagcagcgcctcttccagccc
ggcctgtgtgacgtcgacatcgttctggtgcaccaccgcagcaccttcccggctcacaag
ggcgtgctggcggcctacagccccttcttccactcgctcttcgcccagagcaagcagctg
cggcgcgtggacctgtcgctggacgccctgacgtcgcagggcttccagcagatcctcgac
ttcatctacacctccaagctgctggtgagcagcagcaccgtcggcgaggtgctcgacgcc
gccaccctgctccagatgagcgacatcgcagcctcctgccgggatctcataagcagccac
ttgctgggagccgccggccgtgacatggccgacccggaggagccgggcgccgtggccgcg
tctcccggccagctgtaccgggagatcaagcaggagtcggagctcggcagggtgtacgcg
agggacggcggcggtcccttctctgtcagggtggaggagctgggcaagtcggcgtcgcag
gctgagcagtactaccaggaggagagggggtcggggggtgtggccggcgcgggcgtggcg
gccaacggagaggagtcgaaggcggcggacggtcacccgtccttcaacagggatcagatc
atcgttgaggtcaacctcaacaaccagactctgaatgtctcaaagggattagaggggaag
tcggccacagttacggactccatgtttggttgttgccacggcgacgagcgagacgccgac
ggtgacgaggacaacgaggcggagagcaatgaagctggggaagaggatgctgaagaccta
aagaggggtgacgtgctggggcgaagcagcgaggaggaggaggaggaggatgaagaggag
gaggagaacacccttaacattccaggattagagcagctcatcgttctggaccgaccccgc
cggggcgccgccgccttgaccatagcgggcgccgccgccgccatgcggcagacgctggcg
gaggccacgctcgccaaccgaaggcggagcggcagggggccgccggacggcgagggcccg
ggcccgaaggcgaggctggaggagaagcagcacttcgcgtgcaggaagtgcccgcgcgtc
ttcaacaaccgctggtacctggagaagcacctgaacgtcacgcacagccgcatgcagatc
tgcagccactgcgggaaacgcttcctgctggagagcgagctgctgctgcaccagcagacg
gactgcgagaggagcatccagtgcgcgacgtgcggcaaggccttcaagaagctgtggtcg
ctgcacgagcacaacaagatcatccacggctacgccgagaagaagttctcctgcgagatc
tgcgagaagaagttctacaccatggctcacgtcaggaagcacatggttgcccacacgaag
gacatgccgttcacctgcgagacgtgcgggaagtccttcaagcgcagcatgtccctgaag
gtccactcgctgcagcactcgggcgagaaacccttcaagtgtgagaactgcagcgagcgc
ttccagtacaaataccagctgcgttcccacatgagcatccacatcggacacaagcagttc
atgtgccagtggtgcggcaaggacttcaacatgaagcagtactttgacgagcacatgaag
acgcacacgggagagaaaccgtacatctgcgagatctgtgggaagagcttcaccagtcgg
cccaacatgaagcgccaccgccgcacccacactggcgagaagccgtacccctgcgaggtg
tgcggccagcgcttccgcttctccaacatgctgaaggcccacagggagaaatgcttccac
gtcaccaacccctccccggtttcgtccagcggcgacccgccggccgcggactcttccgct
caggcccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnctgccgccccccagctcctccacgccaaccacctgtccctcccccttctgcgctcc
atgggggcgctgcctcccgcctcccatttacccccacctccgccgctgttctctgctggt
aggatgaactccgacaactaa
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