Kryptolebias marmoratus (mangrove rivulus): 108230349
Help
Entry
108230349 CDS
T05608
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108230349 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108230349 (sox17)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108230349 (sox17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
108230349
NCBI-ProteinID:
XP_017261928
UniProt:
A0A3Q3B8J1
LinkDB
All DBs
Position
LG21:complement(13331273..13333239)
Genome browser
AA seq
395 aa
AA seq
DB search
MSSPDAGYASDDQTQARCAMSVMMPGMGHCQWADPLSPLGDAKAKNEPCASGSGSQSRGK
SEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVTEKQPFVEEAER
LRIQHMQDHPNYKYRPRRRKQVKRIKRLDSSFLVHGVPDHQAQPMAGEGRVCMESLGLGY
HDHGGFQVPPQPLGLYRDAQTLGGPSYETYSLPTPDTSPLDAVDSDFFSPHSQEDCHMMP
AYPYHSQVADFQPQEPLSNHHGNPIMHRHPASAPEQPPQPPSFMGCPNPLAMYYTQHCGS
SHPKRHPGGAGQLSPPPDSHSHSADSVEQMHHSELLAEVDRSEFEQYLSSSSARTDMTGL
LYGSHEAGMQGPESLISSVLSDASTAVYYCNYNSS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcccgatgcgggttacgccagcgacgatcagacccaggcaaggtgtgcgatg
tcagtcatgatgcctggaatgggacactgccagtgggccgaccccctcagtccgctcggg
gacgccaaggcgaagaacgagccgtgcgcctccggctccggcagccagagccgcgggaag
agcgagccgcggatccggcggcccatgaacgccttcatggtgtgggcgaaggatgagcgc
aagaggctggcgcagcaaaacccggacctgcacaacgcggagctgagcaaaatgcttggg
aaatcgtggaaagcccttcctgtcacagagaagcagcccttcgtcgaggaggccgagcgc
ctgcggatccaacacatgcaggatcaccccaactacaagtaccggccccggcggcggaag
caggtgaagaggattaagaggctggactccagctttctggtccacggcgtgcccgaccac
caggctcagcctatggccggggaaggcagagtgtgcatggagagcctgggcctcggctac
cacgaccacggcggcttccaggttcccccgcagccactgggtctctacagggacgctcag
actcttgggggcccctcttacgaaacctacagccttcccacacccgacacgtctcctctg
gatgctgtagattcagacttcttttccccgcactctcaagaggactgtcacatgatgcct
gcgtacccgtaccactctcaagtggcagattttcagcctcaggaacccctctccaaccac
cacggtaaccccatcatgcaccgacacccggcctctgccccagagcagccccctcagcct
ccctccttcatggggtgccccaaccctttggccatgtactacacccagcactgcggctcc
agccaccccaaacggcaccctggcggggcgggacagctatccccacctcctgactcccac
tcccactcagcagacagcgtggagcagatgcaccactcggagctgctggccgaggtggac
cgcagcgagttcgagcagtacctgagctcgtcctcggcacgcacggacatgacgggtttg
ctgtacgggtcgcacgaggccggcatgcaaggacccgagagcctcatatcttcggtgctg
tcggacgccagcacagccgtgtattactgcaactacaacagctcctaa
DBGET
integrated database retrieval system
