Kryptolebias marmoratus (mangrove rivulus): 108230412
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Entry
108230412 CDS
T05608
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X1
KO
K24495
myomesin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108230412 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
108230412 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108230412 (myom1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Ig_J_second
C2-set_3
Receptor_2B4
Ig_CD22
C2-set_2
Motif
Other DBs
NCBI-GeneID:
108230412
NCBI-ProteinID:
XP_017262083
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All DBs
Position
LG21:13464919..13489536
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AA seq
1579 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRNYRSSEAESKMRHYQTSSRITAGSSTSATSRSRGLNVSSHSGL
EESRISPLPKRAKPSYLAVDKENQIIGYVVPIFRGSQEFPSGLSDTEEARVRDTATYMAR
RNLFTSGLEMERSEVTSRKEAMRESAERISMTKRIHEHEEHFKRMNKDSLMHPPEFVIKP
RSHTVWEKQCVRLHCTVSGWPDPRVVWYKNNVAIDPLAHPGKFKLDSRYNVHSLEISKCD
FDDTAQYRVSAMNSEGELSAFASVVVKRFKGDIDESLPAPRLGPVSEYGITFQIHIVDKF
GVSFGREGETMSLGCTVIIYPALHRYQPEIQWYRDDVLLTSSKWTHMHWSGDRATLTLTH
LNKEDEGLYTLRVSTKSGYETYSAYVFVRDSDAEVEGAPGAPLDVRCLDANKDYIIVTWK
QPAVDGGNSILGYFVDRCEVGTTHWIQCNDTPVKFARFPVTGLVEGRSYTFRVRAVNKSG
ISHPSRVSEPVAAMDPADRARMRGTSAPWTGQIIVTEEEPAESVVPGRPLELQVTEATKN
YVVLSWKPPGEKGLEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSYSFRV
RCCNSAGVGEPSDPTEAITVGDKLDIPSAPGKVVATRNTDTSVVVSWEASSDAKDLVGYY
IEGSVVGSNVWEPCNNKPVRGTRFICHGLTTGEQYVFRVRAVNAAGLSQFSQISEPVEVK
AAISSPAPPYGISVLECVRDSMVLAWKQPTFVGGADITGYFVDYREVIDGVPGKWHEANI
KAVSERAYRVCDLKENRKYQFQVRAANMAGVGIPSMPSNTFLCEEWTIAVPGPPHDLQVR
EVRNDSVALLWRPPVYQGRDPVNGFYVDIKEADAPEEDWRGVNTKATEKTYIKVKNLKEG
ASYVFRVRAQNKAGVGKTSDVTEPVPAVTKPGTKEIVVEVDDDGIISMNFECCDLTPDSK
FVWAKNYEEITDTSRLAIETKGNKSKAVFASLGEEDIGVYSCLVTHTDGASSSYTLSEEE
LKRLLEVSHDHKFPIIPLKSDLAVELLEKGKVRFWLQAEKISANGKVDYVFNDNVLSQGE
KYKMNFDKNTGVIEMLMESLTPADEGTYTFQMTDGKATNQSSLVLIGDVFKQLQKESEFQ
RKEWFRKQGPHFIEGLGYEVTPECCVILKCKVGNMKKETTAQWAKDGHEIKADEHLGFTE
GVLKLEIAQISKKDAGVYEVVLKDERGKDTSTLNLTDQGFKDLMNEVFSFIANSSTPLKI
TSTDEGIRLYTFVSYYNDLLQVTWHYKDSAIAFSDRIKSGVVGDQLWLQITDPTEKDMGK
YAIEFNDGKGGLRRTVELSGQAFDDAFAEFQRLKAAAVAERNRARVAGGLPDVVTIQEGK
ALNLTCNISGNPVPEVTWLKNDREITSDEHCILKFESGKFASFTITAVNTSDSGKYSILV
KNKYGTESGDFTIEVTEGEPDLGVTSYWTDAEGNVVFGPNTPKEKMKTPATGTKTPKHKE
SAAKKVEGKSGSVKEELTEKKTAEAATAEPKASHSEPPVDAKEDLGDPPTTPDCSDAQKQ
PETAEEPERENKTQPEITK
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatctatacccttctaccagaagcaccatcgccactatgatcgtaactaccgt
agctcggaggcagagtctaaaatgagacactaccagaccagcagcagaatcactgctggc
agcagcacgtccgccaccagcaggagcaggggacttaacgtgtcctcacactcgggactg
gaggagagcagaataagccccttacccaagcgagccaagccatcgtacttggctgtggac
aaagagaaccaaataatcggctacgtagtgcctatcttcaggggcagccaagagttccct
tcaggcctgtcagatacagaggaagccagagtgagagacactgccacatacatggcccgc
aggaatttgtttacaagtggcctggagatggagaggtcagaggtcacttccaggaaggag
gccatgcgcgagtcagctgagcgcatctctatgactaaaaggatccatgagcacgaggaa
cactttaagcgtatgaacaaagacagcctgatgcaccccccggagtttgtgattaaacct
cgctcccacactgtgtgggagaagcagtgtgtgcggctgcactgcactgtcagcggctgg
cctgaccccagggtcgtctggtacaaaaacaatgttgcgattgaccctcttgcccaccct
ggcaagttcaaacttgacagcagatacaatgtgcactcgctggagatcagcaaatgtgat
tttgatgacacagcccagtatcgtgtctctgccatgaactcagaaggagagctgtccgca
tttgcttctgtcgttgtcaaacggttcaaaggtgacattgatgagtcgctgccagcaccc
agacttggcccagtttctgagtacggcatcaccttccagattcacattgttgataagttt
ggagtgtcgtttggaagagagggcgagactatgagtctggggtgtacggtcatcatctac
cctgccctgcaccgctaccagccagaaatccagtggtacagagatgatgttctgctgact
tcctctaagtggacccacatgcactggagtggggaccgagccacactgactctaacccac
ctcaacaaagaggacgagggactctacaccctgcgcgtctccaccaagtctggatatgaa
acctattcggcctacgtgtttgtcagagactctgatgctgaagtggaaggcgctcctgga
gctccactggatgtccgctgtctggatgccaacaaggattacattattgtcacctggaag
caaccagctgttgatggagggaactccatcttgggctactttgtggacaggtgtgaggta
ggaacgacccactggattcaatgcaacgacacgccggtcaagtttgctcgcttcccagtg
actggtttggtggagggccgttcctacaccttccgcgtccgtgccgtcaacaagagtggc
atcagccacccgtctcgagtctcagagccggtggctgccatggacccggctgaccgcgcc
cgcatgagaggtacttctgctccctggactggacagatcattgtgacagaggaggagcct
gctgagagcgtcgttcctggtagacctcttgagctgcaggtgaccgaagcaaccaaaaac
tacgtagtgctgagctggaagcctcctggagagaaaggcctggagggcgtcatgtactat
gtggagaagtgtgtttctggcacagatagctggcagagggtgaacacagagatcccagta
aagtctcctcgctttgcgctgtttgatctcgctgaggggaaatcctactcctttcgtgtt
cgctgctgcaactccgctggtgtcggtgagccctctgacccaactgaagccatcacagtt
ggcgacaaacttgatatcccatctgctccaggaaaggttgttgccactagaaacacagac
acatctgtcgttgtgagctgggaggcatccagtgatgccaaagacctggtggggtactac
atcgaggggagcgtggtgggtagcaatgtgtgggagccgtgcaacaacaagcctgtaagg
ggcaccaggttcatctgccacgggctgaccacaggtgagcagtacgtgttcagggtgagg
gcagtgaacgcagcaggactcagccagttctcccaaatatcagagcctgtggaggtgaaa
gctgcaatttcctcacctgctccaccctatggcatcagtgttctggagtgcgtgcgtgac
tccatggtgctggcctggaagcagccaaccttcgtcggtggtgctgacatcaccggctac
tttgttgattaccgtgaggtcatcgatggagtgccggggaagtggcatgaggccaacatc
aaggccgtcagtgagagggcctacagggtgtgtgacctgaaggagaacaggaagtaccag
ttccaggtgagagcagccaacatggcaggtgtcggcatcccatcgatgcccagcaacacc
ttcctgtgtgaggagtggaccatcgctgtaccaggaccccctcatgacctgcaggttaga
gaagtgagaaatgactccgtggcgttgctttggagacctcctgtgtaccagggccgcgat
ccggtcaacgggttctacgttgatatcaaggaagctgacgcgccagaggaagactggagg
ggagtcaacaccaaggctacagagaaaacatacatcaaggttaagaatcttaaagaagga
gcgtcgtatgtgttccgagtgcgcgcccagaacaaagcaggtgtcgggaaaacctcagat
gtgacggagcccgtccctgctgtgaccaaaccaggcactaaggagatagtcgtggaagtt
gatgatgatggtattatctccatgaactttgaatgctgtgacttgacccctgactccaaa
ttcgtgtgggccaagaactacgaggaaatcacagacaccagccgcctggccatagagacc
aagggaaacaagtccaaagctgttttcgcgtccctcggggaggaggacatcggtgtttac
tcgtgcctggtcactcacactgatggtgcttcatccagctatactctctctgaggaagaa
ctgaagaggctgctggaggtcagtcatgaccacaagttccccattattcccctgaagtca
gatttggccgtggagctgctggagaagggcaaagtgcgcttttggctgcaggcggagaag
atctcagcgaacggcaaagtcgattatgttttcaacgacaacgttctctctcagggggag
aaatacaaaatgaactttgacaagaacaccggcgtgattgagatgctcatggagtctctg
accccggcagatgaaggcacgtacaccttccagatgacagacgggaaagccacaaaccag
tccagcttggtactgattggagacgtgttcaagcagctgcagaaggaatcagagttccag
agaaaagaatggttcagaaagcaaggtcctcactttatcgaaggtttgggttacgaggtc
actccagagtgctgcgtgattctgaaatgcaaggttggcaacatgaagaaagagactaca
gctcagtgggccaaagatggacacgagatcaaggcggacgaacatctcggcttcacagag
ggagtcctgaaactggagatagcccagatttccaagaaggatgctggcgtgtatgaggtt
gtgctgaaggatgaaagaggaaaagacacgtccacgttgaatctgacggatcagggcttc
aaagacttgatgaatgaagttttcagttttattgccaattcgtccactcctttgaagatc
acaagcacagatgaaggaatccgactctacaccttcgtcagctactacaacgatttactc
caagtcacgtggcactacaaggattctgccatcgccttctctgaccgcataaagagtggt
gtggttggagatcagctgtggcttcagatcaccgaccccacagagaaagacatgggcaaa
tacgccatcgagttcaacgacggaaagggcggccttaggagaaccgtggagctctctgga
caagcatttgatgatgccttcgcagaattccagagactcaaagctgcagctgtggcagag
agaaatcgtgctcgagtagcaggaggtctgcctgatgtggttactatacaagagggcaag
gctctcaatcttacctgcaacatttcgggcaacccggtgccagaggtcacctggctgaag
aacgaccgggagatcacgtccgacgagcactgcatcctgaagtttgagtcgggcaagttc
gccagcttcaccatcacggctgtgaacacgtcggactccggcaagtacagcatcctggtg
aagaacaagtacggcacggagagcggagacttcaccattgaggtcacggagggagaacct
gacttgggggtgacttcttattggacggatgcagaaggaaatgtggttttcggtccaaat
acaccaaaagaaaagatgaaaaccccagcgactgggacaaaaacaccaaaacataaagaa
tctgctgctaaaaaggtggagggcaaaagtgggagcgtcaaagaagagctgacagagaaa
aaaactgcagaggctgctactgcagagccaaaagcttcacattcagaaccaccagtggat
gcaaaagaagatttgggtgacccaccaacgactcctgactgctcggacgcccagaaacag
cctgagacagcagaagaacctgaaagagagaataaaacacagcctgaaatcaccaaatga
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integrated database retrieval system
