Kryptolebias marmoratus (mangrove rivulus): 108230463
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Entry
108230463 CDS
T05608
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
kmr03037
]
108230463 (rttn)
Cilium and associated proteins [BR:
kmr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108230463 (rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
Arm_2
Motif
Other DBs
NCBI-GeneID:
108230463
NCBI-ProteinID:
XP_017262214
UniProt:
A0A3Q3ABS3
LinkDB
All DBs
Position
LG21:complement(17708452..17737312)
Genome browser
AA seq
2248 aa
AA seq
DB search
MELSPLIKKTGHSLVEIRVRALKSILCKLDHSLISVTDIVQEKMLFVHLLEWFNFPEVPM
KEEVLGLLLMLSKHPSAAQMLRDVGAVDFLTQLAPTMEPRLRAVIDGTLDQLFQLPELLP
SQSAVYSHGPCSTTTTAPTCVTPDGNLPKTGYFHKPIHHNTDVPPQKIAVHESVRCLRFS
VFPWLTLTNTDRHILSSNESSLRSTNPNLVRTTCELLCDVIMQDFPAEIFLQRPGIVKNL
LSLLKLALGKGEGVYLHSPALSCLRQLCVGIKRRMRFHQDPSFYTAKQDLTSQNSSFSYT
HEVLGNQRSQASSPAAACSPRPSVVGHASQRAMGDGQDEDIASNSGSSHQGGAAVQAPRQ
MPPSPADVAQLALPDLGVEDVLELQLQQLTVAQFTVATMQHAIPLLKTEGLHVFHRVLEL
LCDAVLLLGDSVCELVWDDRSLVGMELKEKLQVCMELLGDILNYHQNYPADAPHRFHVHH
RMAYIGTAIFTIKLLQTILPPEKASDNLPENTATALFHLCLDASLGSLLPSMQETAVAYL
EQVNSDNHDLYRRATRAALWMESTCNFLKEVQAEGEKNWLELLELAEQAISGLPFHQHLH
IIKECVHMCSYLWKFDQPSPLLQTESQKVFLRLLSHPSLPVKTETYECTLNLVKDCLGIQ
NISRQESAACTGVNFLLHHKVLYEVSTFGLQDSAEKVNTAAKDILLFLLKGRLMMTPSTW
DRFNEELYSVIPILQGYASTEESLGKCVLLISDMLDVARDDVFPSTARLKAALRLLFTKQ
PTVRLAAVQQILPHLTSSSDANVATPDMDQSAIASLANLFCLRNPVDVTLDTSSKSILKM
ESVKKLFCILHSDTVDISLRRSAAEQLSVVLQDTTMHPVLKNLSITEKVISLITECVNGN
KSFDCLLEPCVCILRKLVYADPSLRHSLAQRSPLLLALLRASLILKENKGNGGETAVLMT
LLLFDEIASIQTWSDKSTTDATLSPFSLPLTAVRRYNIPFQAATYHAVSPYCCVLAPADL
LTLTPARQALQVAWNTAWHSGMDNLLEKLHNDADDADQFHPDLKLSTSQLVSLQAVRLPF
AVQDCIQAITTASGHRSVASALSRLSLYMLFDRLALPHVPTHGCRDILHSLSWQAALTRF
LQVRPTCVEDESLLVGIVTFLNAYFKQIPTEFVCEAEDRNLHWILELLLNQETAALLHLL
LGVETQSSTQSPGEPEELKDHVRQRLQRELTCFFNTLLHRLSLTTDRLCLALAGPFKSQL
AVRLLQSLRVSDAPRFYGLPSLERTLQGMVSLTAQPGWSSHCPDQEPSSLCSKYLSGLLE
VISSFYVEWRGNSLSFMGKGVTKNAVICLLHLCHEMMAENKEKDLISQWCLGNEGTTEES
GSSQLGLAWLIPLWVDRDQEVRFASLSLGSALTSMPSGCQALCASCQNISGGLWGTLLNI
LLDQQDSSMVRREAAFILQNLLVMPMPANAEEAKDSHWQHPCVHDEVSGVSVVGLPALQA
LLYHCQYFQNVALSASNCYRGRYVFQVQPRAAGSTGSTLQESTSTDSENSLLFWRWDPPP
SISSGRPSSSLSTSSTVVSNALIRGSGPNTPQVSSPLSIPDDTPAASRLMAQGQSDGDTS
NSITSQDSQQAEPSAVEPVFMVTPDLLTAHCGLLTNLLAILPEFTLAALRHNQLLQVLAS
LVDIEPIEKSLTELRTPNILPGEKEDIKTQLVTALRFLSSFSKLLQSCIMASKELIGQMD
FLKQLLSHLLAVLMLDTKGLDAGTRDVVRVSWTDVFMLLATLLKRDSSAAHPSVSAVLGR
RWRTFAGTISECVNEKFADSLLHTATLQFLSTVFTEETKCRSKEVTSSVSKHRTNLSDIL
NGPSASQLCELLLQSFEKRTLQDPLKKLTARALMTLLTCSPAAQSYAAKAGLIDSCVEQL
KQTHSQLRLESVRPDRASHRKKDGGYLKEVKRTVEILWSALYCNDECKVVAADARLTPTL
YALWPWLLFDDTTMEAALELLCVYTADCPAACSSLCSSSPSGVPGSKGSSNNSLMHSVMK
LTSLASDNGPIQNLAFSLLVNLTVSRDCRCILQKNNFLQAFLSVPVPKAAGAKATSVGGG
ASPLALWLRLLVSLSSAEDGQQSILKVTGALELLADLAPHRRHALLALHNLCFCSANKSH
VIANDKVLKVLLTCLESREMETCCMGASALWALLYNNQRAKTSLKCPSVRLKIEEAHSFF
KKDAEKKQEPLSVYLLKCLEHVSQLLKS
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atggagttatctccccttataaagaaaacaggtcactctttggtggagataagggttcga
gcgttgaaaagcatcttgtgtaaactggaccattcccttatctccgtgactgacattgta
caagaaaagatgctgttcgtgcatctcctggagtggttcaatttccccgaggtgccaatg
aaggaggaagtcctcgggttgcttttaatgttatcaaagcatcccagtgcagcccagatg
ctgagagatgtcggggcggtggacttcctcactcagctagctcctacgatggagcccaga
ctgcgagctgtcatcgatggaaccctggaccagctgttccagcttcccgagcttctcccc
agtcagtcagctgtctactcacatggaccatgcagcacaactacaacagctccaacatgt
gttacacctgatggtaatttgcctaaaacgggttatttccacaagcccattcaccacaac
acagacgtaccacctcagaagatagcagtgcatgaatctgtgagatgtctgaggttttct
gtgtttccgtggctgactttgacaaacacagacaggcacatactttcttccaatgagagc
tctctgaggagcaccaatcccaacctggtgagaacaacctgtgagcttctgtgtgacgtc
attatgcaggactttcctgcagaaatcttcctgcagagacctggtattgtaaagaacctc
ctgtctctgctgaagttggctttggggaaaggtgagggggtctacctccactctcctgcg
ctttcctgcctgcggcagctttgtgtgggaatcaaaaggaggatgcgttttcatcaagat
ccaagcttctacactgcaaagcaagatctaacgtcccagaactcgtccttctcctacact
catgaagttttggggaaccagcgttcacaggcatcctctcctgcggcggcgtgctctcca
cgcccttctgtggtgggtcacgcaagccagagagccatgggtgacggccaagatgaagac
atcgcctctaacagtggcagctcacaccaaggtggggcagcagttcaggcccccagacag
atgcccccttcacctgccgatgtggcccagttggcgcttcctgatctgggtgtcgaagat
gttttagagctgcagttacagcagctcacggtggcccagttcacagttgctaccatgcaa
catgccatacctctacttaagactgaaggtttgcatgtgttccaccgtgttctggagctg
ctgtgtgatgccgtcctcctgctcggggacagcgtttgcgagctggtctgggacgatcgc
agcctggtggggatggagctgaaggaaaagctgcaagtatgcatggagctactaggggat
attctcaactatcatcagaactatccagcagatgcccctcaccgtttccatgtccaccac
agaatggcctatataggcactgccatatttaccattaaactcctacaaactatcctccct
cctgagaaggctagtgataatctcccagaaaacacagcaacagctctctttcacttatgt
ttggatgcgtcattgggaagtttattacccagcatgcaagagacagcagtggcctacttg
gagcaagtgaactcagacaaccatgacctctacaggagggcaaccagagctgctctgtgg
atggaatcaacctgcaacttcctgaaggaagtacaagctgagggggaaaagaactggttg
gagttactggaacttgcagaacaagctataagtggccttccatttcaccagcacttgcac
atcatcaaagaatgtgttcacatgtgctcctatctgtggaagtttgatcaacccagtcct
ctccttcagactgagagccagaaagtcttcctccggctgctgtcccatccgtcactgcct
gtcaaaacagaaacatacgaatgcacgttaaacctggtcaaggactgccttggcatccag
aatatttcacgacaggaatcagctgcgtgcacaggcgtcaacttccttctccaccacaaa
gtgctctatgaagtgagcacttttggactccaggactctgcagaaaaggtgaacacagct
gccaaggatattctgctattcctgctcaagggacgattgatgatgacaccatcaacctgg
gacagattcaatgaggagctttattcggtcatacccattttacagggctatgccagcact
gaagagtcacttggaaagtgtgtcctgctgataagcgacatgttggatgtggcgagagac
gatgttttcccaagcacagcccggcttaaagcagcactccgactcctttttaccaagcag
cccactgtaagactagcagcagtgcaacaaatcctgccccacctaaccagcagcagtgac
gcaaacgttgccacacccgacatggatcaatcagcgattgcatccctcgccaacctcttt
tgcctcagaaaccctgtggacgtcacacttgacaccagcagcaagtccattttaaagatg
gagtcagtgaagaagctgttttgtatccttcattcagacactgttgacatttccctcaga
agatcagcagcagaacagctgtctgttgtgctgcaagacacaacaatgcacccagtactg
aagaatctgagcataacagagaaagtaatttctttaatcacggagtgtgtaaatggcaac
aagagctttgattgtcttctggagccgtgtgtttgcatcttgagaaaactggtgtatgct
gatccgtctctgaggcacagcctggcgcagcgcagccccctgctcctcgccctgctcagg
gcatctttgatactgaaggagaacaaaggaaatggaggtgagactgctgtcctcatgact
ctgctgctctttgatgagatcgccagcattcaaacgtggtcagacaaatccaccacagat
gcaaccctttctccgttctccttaccgctgacagcagtacgcaggtacaacatacccttc
caggcagccacttatcacgccgtcagcccatactgctgtgtcttggctcctgctgacctc
ctgacccttacccccgcacgccaagccttgcaggtagcctggaacaccgcatggcattct
gggatggataacctcctggagaagctgcacaatgatgctgatgatgctgaccaatttcat
cccgatttaaaactatcaacgtcgcagcttgtgtcgctgcaggcagtgcggcttccgttt
gcagtgcaggactgcatccaggccatcaccaccgcgtcaggtcacaggtccgtggcctct
gctctgtccaggctcagcctttacatgttgtttgacagactggctctgcctcacgttccc
acccacggctgcagagacatcctccattccctcagctggcaggcagcactgactaggttt
ctccaggtgcgcccaacctgtgttgaggatgaaagcctgctggtgggaattgtgacattt
ttgaatgcctacttcaaacaaattcccacagagtttgtgtgtgaagccgaggacaggaac
ctacactggatattggagctgcttctcaaccaggagactgcagctctccttcatttgctt
cttggtgtggagacgcagagctccactcagagcccgggggaaccagaggagctgaaggac
catgtcagacagaggctgcagagagaactcacctgcttctttaacacgttactccacaga
ctgtcactcaccaccgacaggctgtgtttggcactagcaggcccctttaagagccagctg
gcagtccgtttgcttcagagcctgcgggtgtccgatgccccacgtttctatggccttccc
agcctggagaggacactgcagggcatggtgagcctgaccgcccagcctgggtggagctcc
cactgccccgaccaggagcccagctccctctgctccaagtacctcagtggattactggag
gtgatctcctcattctacgtggagtggagggggaactccttgtctttcatgggaaaaggt
gtgaccaaaaatgctgtcatctgcctgcttcatctgtgccatgagatgatggctgaaaac
aaagaaaaggatttgatttcccagtggtgtttgggaaatgagggaactactgaggaatct
ggttcttctcagctgggtttggcctggcttatcccactgtgggtggaccgagatcaagag
gtgaggtttgccagtttgagtttgggttcggctctgacctcgatgcccagcgggtgccag
gctctgtgtgccagctgtcagaacatcagcggaggcctgtggggcacgttgctcaacatc
ctcctggatcagcaggatagcagcatggtccgcagagaggctgcgtttatcttgcagaac
ttgctggtgatgccgatgcctgccaacgcagaggaggccaaggactcccactggcagcac
ccatgtgtccacgatgaggtgtctggtgtgtctgtggtgggtcttcctgcgctacaggct
ctgctttaccactgtcagtatttccaaaatgtggcactctccgcttcaaattgttaccgc
ggcagatacgttttccaggtccagcctcgggccgcaggtagcactggctccactcttcag
gagagcacttcaactgattctgagaattccttgctgttttggagatgggacccaccaccc
agcatcagctcgggacgaccttccagctccctttccacctccagcactgtggtcagcaat
gctctgatcagaggttcaggaccaaacactcctcaggtttcctccccattgagcatccca
gatgatactccggctgccagcagactgatggctcaaggtcagagtgatggagacacaagc
aactcgattacctcgcaggattcccaacaagcagagccttcagccgtggagcccgtcttc
atggtaacccctgacctcctgacagcccactgtggcctgctgaccaatctgctggccatc
ctgcccgaattcaccctcgctgctctccgacataaccagctcctccaggttctggccagt
cttgtggatatagagcctattgagaaatctctgactgagctgagaacgcccaacatcctt
cctggggagaaagaagacatcaagactcagctcgtcactgcacttcggttcttgtccagc
ttttccaaactactgcagtcttgtatcatggcaagcaaggagctgattggccagatggac
ttcctgaaacagctgctgtctcatcttttggctgttctcatgctggatacgaaaggatta
gacgcaggtacccgggatgtggttcgtgtgagctggacagacgtgtttatgctcctggct
actctgctgaagagagacagctcagcagcgcacccatctgtctctgccgtgttggggaga
cgctggcggacatttgcaggaacaatatccgagtgtgtgaatgagaagtttgcagactct
cttctccacacagccactctgcagttcctctccacagtgttcacagaggagactaagtgc
cgcagcaaagaggtcacaagctccgtatccaaacaccgcacaaatctgtcagacatccta
aatggtccctctgccagccagctgtgtgaactgttactgcagagctttgagaaaaggacc
cttcaggatccgttaaagaagctcacagctcgagctctgatgacgctgctgacctgcagt
cccgcagctcagagctatgcagccaaagccggtttaatcgacagctgtgtggagcagctg
aagcagactcattcgcagctccgcctggagtcggtccgacccgacagggcttctcaccgc
aaaaaggacgggggctatttaaaggaagtcaagcggactgtggagatcctgtggagtgct
ctttattgcaacgatgaatgcaaagtggttgctgcagatgctcgtctaaccccgacactt
tacgctctctggccgtggctcttgttcgacgacaccacgatggaagcggcgctggagctt
ttgtgcgtctacacggccgactgcccagcagcatgcagttctctgtgtagcagcagcccc
agtggggtaccaggttcgaaaggctcctcgaacaactctctgatgcactcggtcatgaag
ctgacctcgctcgcctcagacaacggccccatccagaacctggccttctctctcctggtg
aacctgacggtgtcacgggactgcagatgcatcctgcagaagaacaattttcttcaggcg
ttcctctcggtgcccgtgcccaaagcggcgggtgcgaaggccacgtcagtaggtggcggt
gcgagccccctggccctctggctcagactgctggtcagtctgtcatcggcggaggacggc
cagcagagcatccttaaggtgaccggagccctggagctgctggctgacttggcaccgcac
cggcggcacgctctgctcgcccttcacaacctctgcttctgctctgccaacaaatcgcac
gtcatcgccaacgacaaagttctgaaagttttgctgacatgtttggaaagtagagaaatg
gaaacgtgctgtatgggagcgtctgcactgtgggcgttgctctacaacaatcaaagggcg
aagacttccctgaagtgtccttcggttcggttgaaaatcgaggaggcacattccttcttc
aaaaaagatgccgagaagaagcaggagcctctgagtgtttacctgctgaagtgcctggag
cacgtctcccagctgctgaaaagctga
DBGET
integrated database retrieval system
