Kryptolebias marmoratus (mangrove rivulus): 108230466
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Entry
108230466 CDS
T05608
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108230466 (trpc1)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108230466 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
108230466
NCBI-ProteinID:
XP_017262221
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Position
LG21:complement(14786995..14801374)
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AA seq
806 aa
AA seq
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MHISAWPYSLSVVMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNVNCVDVLGRDAVTIAIENENLDILQLLLEYGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIASFRGLSHLSQKLMQRIQNPEYSTTMDVAPVILAAHRNNY
EILTMLLKQDISLPRPHAVGCECMLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEED
PILRAFELSADLKELSLVEVEFRNDYEEVAKQCKMFAKDLLAQARNSRELEVILNHTSSE
DHVDKRGLLEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKMG
TVLSVALLWPLLSICYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEDK
KNTMGPALEMIDYLLILWILGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFAL
KIVAHSKFKNEQETERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISM
GQMLQEFGKFLGLFLLVLFSFTIGLTQLYGKDHKNPDKKTPKDCEGIFCQQQSNDAFHTF
MGTCYALFWYIFSLAHVALFVTRISYTQELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHK
SFRQIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVTSMRKWICSHTT
KGKVKRQNSLKEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQD
LSKFRNEMRDLLGFRTSKYAMFYPRS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgcctggccgtactcgctctccgtcgtaatggcagctctgtaccagggc
acggacgcctcctctccggacaaatttctggccttgaaggacgtgagagaagtgaaggag
gagacgacgctggacgagaagctcttcctgctggcatgcgagaaaggtgattactacatg
gtgaagaagctgctggaggaaaaccgccacggcgagctcaacgtcaactgcgtggacgtg
ctgggccgggacgccgtgaccatcgccatcgagaatgagaatctggacatcctgcagctt
ctgctcgagtacggttgccaggcgacagatgccttgttggtggccatagactcagaagtg
gtgggagctgtggacatccttctcaaccacaggccgaggcgatcctcaaagccctccatt
gcttctttcagaggtttatcccatctttctcagaaactgatgcagcgcattcagaaccct
gagtactccaccaccatggacgtagctccggtcatcctggcagcgcacaggaacaattac
gagatcctgacaatgctgctgaagcaggacatatcgcttccccggcctcacgccgtcggt
tgcgagtgcatgctgtgcaatgctaaaaacaagaaggacagcttaagacactccaggttc
cgccttgacatctaccgctgcctggcgagtccttctctcatcatgctgaccgaggaggat
cctattctcagagcgttcgagctcagcgcagacctgaaggagctcagcctcgtcgaggtg
gagttcaggaatgactatgaggaggtggcgaagcagtgcaagatgtttgccaaggatctg
ctggctcaggctcgaaactcccgagagctcgaagtgattcttaatcacacctccagcgag
gatcacgttgacaagagaggcctgctggaggagcgcatgaacctcagccgacttaaactc
gccatcaagtacaaccaaaaagagtttgtggctcagtccaactgtcagcagttcctcaac
actgtctggtttggggagatggccagctatcgtcgcaaacacacctgtctaaagatgggc
accgtgttgtcggtggccttactttggccgctgctgtccatctgctaccttctggtgcca
cgttcccgagtcggccagataatccacacaccttttgtcaagttcattatccacagcgcc
tcgtacttcaccttcctgctgctgctcaacctttactctctggtgtacaacgaggacaag
aagaacaccatgggccccgcgcttgagatgatcgattacctcctgatcctctggatccta
gggatggtgtggtcggatgtgaagcgtctgtggtacgaagggctggaagattttctggaa
gagtcgaggaaccagctgagctttgtgatgaattcgctttacctggccaccttcgctctt
aaaatagttgctcatagcaagtttaaaaacgagcaggagacagagaggaagaattgggac
gccttccatcccatcctggtggcggagggtctctttgcgtttgccaatgttctgagttac
ctgcgactcttcttcatgtacaccaccagctccattttggggccactacagatctccatg
ggacagatgctgcaggagttcgggaagttcctgggcctcttcctgctcgtgttattctcc
ttcaccatcgggctcacccagctctacgggaaagaccacaaaaaccccgacaagaaaaca
cccaaggactgcgagggcatcttctgtcagcaacagagcaatgacgcttttcacacgttt
atggggacctgctacgctctgttctggtacattttctccctggcgcacgttgcgctcttc
gtcacccggatcagctacacgcaggagctgcgctcttttgtcggtgccatgatcataggc
acatacaacattgtggttgttattgtgctgaccaagctgctggtggccatgctccataaa
agcttcagacaaattgctaatcacgaggataaggagtggaagtttgctcgagccaaactc
tggctcagctactttgatgacaagtgtactctgcctccaccttttaatatcctcccttca
ccaaagaccgtctgctacttggtgaccagcatgaggaagtggatctgttcacatacgaca
aagggcaaggtgaagagacaaaacagcctgaaggagtggcggaacctgaagcagaagcga
gacgagaactaccagaagatcatgtgttgcctggtccaccgctacctgacctccacgcgg
cagaagatgcagagcaccgaccaggccacagtggaaaacctcaacgacctgcgccaggac
ctgtccaagtttcgcaacgagatgcgggacctgctgggcttccgcacgtccaaatacgcc
atgttctacccgaggagctaa
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