Kryptolebias marmoratus (mangrove rivulus): 108230507
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Entry
108230507 CDS
T05608
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
kmr01001
]
108230507 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108230507 (prpf4bb)
Enzymes [BR:
kmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108230507 (prpf4bb)
Protein kinases [BR:
kmr01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
108230507 (prpf4bb)
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108230507 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CoV_S1_C
CSTF_C
Motif
Other DBs
NCBI-GeneID:
108230507
NCBI-ProteinID:
XP_017262294
UniProt:
A0A3Q3B377
LinkDB
All DBs
Position
LG21:12461611..12470391
Genome browser
AA seq
1017 aa
AA seq
DB search
MADVEIDIMSRRMNNGNEHVKEDLESHERSGNEDSGDLSEEEEEEEAGNIDDKVDDKSKH
HSSSGGKHKRKKHKHRSKHKKHKHASDEDKDRKRKHRHKHRKHKRKEGSPPSAAVLFGSS
SQRKVESSPSSGNPSLDDRAVLEDLEKQRAMIKAELDSQLMEGKVQSGMGLILQGYNSGS
EEDGDARFRNGEQHPRGSSGKPVSPRGGKNRKSRRDSTTEVSKSGSKRRSRSKSADKPAK
ETKQDKGTKSSKDTGVKDRGRVRSRSKDKKSSGSADQSKERRKSNSPSNFRAEQKVSRVD
RRPSPQRDDRPNQDRPSRRSRSPVRERPSRSDADRDKRPAKSPSKDTSLGKENRSPHRRV
PHSPIRKRSSSPRHRDAHHTAGSASDRTSKLSHSPSRTKSSPRRPRSRSADPRRRDADRQ
DSPLRKRSRPDAGPARDRSREKSPRSSSRRRVSRSPFRRRSLSPRRRSRSSPRRRSRSPL
GHRSGERDRYGRLRQYRRSTSRDRERRRRRSRDEDKFKGSLSEGMKVDQESSEGEMLEDF
EGEEVDEEALIEQRRQQRMAIVQKYKVLNEDTSLVSEPNSPQSSTRSRSPSPDDILERVA
ADVKEYERENVNTFEASIKAKHNLIAQEKDGANPKKPSAPDMFTESDDMFAAHFDSARMR
AAGLGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGQGVFSNVIRARDTARA
GQEVAVKIIRNNELMQKTGLKELEFLRKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPL
SMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTIL
KLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLYELYTGRILLP
GSSNNHMLKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVMSTIN
PTKDLLAELIGGQRLPEDQRKKVMQLKDLLEGTLMLDPAKRISINQALQHPFIQEKI
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtggagatagacatcatgtccagaagaatgaataatggcaacgaacacgta
aaggaagatctggaaagccacgaaagaagtggaaatgaggacagcggggacttgtcagag
gaagaggaagaggaggaagctggaaatatcgatgataaggtggatgacaaatccaaacat
cacagcagcagtggcggcaaacacaagaggaaaaaacacaagcatcgcagcaagcacaaa
aaacacaaacatgcatccgacgaagacaaggaccgcaaacgcaagcatcgacataaacac
aggaaacacaagcgcaaagagggttcccccccttctgctgccgtgctctttggctcctcc
agccagaggaaggtggaatcgtccccctcgtctggaaatccgagtctcgatgacagggct
gttttggaggatctggagaaacagagggccatgatcaaagctgaactggacagccagctg
atggagggcaaggttcagtctggcatgggtttaatccttcagggctataactctggatct
gaagaggatggagatgcaaggttcagaaatggagaacagcatccaagaggcagctcaggt
aaacccgtatctcccagaggggggaaaaataggaagtctagacgggactcgacaacagag
gtcagtaaatccggctccaagcgtcgtagtcggagtaagtctgcagataaacctgccaag
gagacaaagcaggacaaggggaccaaaagcagtaaagatacaggtgttaaagacagaggt
cgcgtcaggagcagatcaaaagacaaaaagagttcaggcagtgctgatcagtccaaggag
agaaggaagtctaattctccctccaactttagagctgagcagaaagtcagtcgtgtcgat
agacgtccctctccacagcgagatgacagaccaaaccaagacagaccgagtcgacggtcc
agatcgcccgtgcgagaacgcccaagtcgctcagatgctgatcgggacaaacggccagcc
aagtctccgtctaaggacacgtcgttgggaaaagaaaaccgctccccccacagacgagtg
cctcacagccccataaggaaacgcagttcttctcctcgtcacagagatgcccaccacaca
gctggtagtgcctcggacaggacatcaaaactgagccactctccatctaggacaaagtcc
tccccaaggagaccccgcagccgctcagcagaccccaggaggagggatgcagacaggcag
gactctccgctcaggaagcgatctcggccagatgctggaccagccagagacagatcacga
gagaagagtcccagatcatcctctcgtcgcagagtgagtcgctcacctttcaggaggaga
tccctgtcaccacggcgacgctctcggtcttcaccccgcagacgaagcaggtctccactc
ggacacaggtctggggagagagacaggtatggtaggctccgccagtatcgtcgctcaacg
tctcgtgatcgggagaggaggaggcggcgcagcagagacgaagacaagtttaaagggagt
ctttcagaggggatgaaagttgaccaggaatcctcagagggagaaatgttggaggacttt
gaaggggaggaggtcgatgaagaagccctcattgaacagcggcgacagcagcgcatggcg
atcgtccagaaatacaaagtgttgaatgaagacaccagcttggtgtctgagcccaacagt
cctcagagcagcacacgtagccggtcaccctcgcccgacgacatactggagcgagtagct
gcagatgtgaaggagtatgaacgcgagaacgtcaacaccttcgaggccagcatcaaagcc
aagcacaacctcatcgcccaggagaaagacggagccaacccaaagaagccttcagccccc
gacatgtttacagagtcagacgacatgtttgctgctcattttgacagcgccaggatgaga
gcagctggactcggaaaggacttcaaggagaaccccaacctcagggacaactggacggat
gctgaggggtactacagggtgaacattggcgagacattagacaagcgctatgacgtatac
ggctacacgggtcagggagtgttcagcaacgtgatcagagccagggacactgccagggct
ggccaggaggtggcagtcaagatcatcagaaacaacgagcttatgcagaagacgggtttg
aaagagttagaattcctcaggaagctgaatgatgctgatcccgatgacaagttccactgc
cttcgcctcttccgacacttctaccacaagcagcatctttgtcttgtgtttgagcctcta
agtatgaatttacgagaggtgctgaagaaatacggcaaagatgttgggctccatatcaaa
gctgtgcgatcctacagccaacagctcttcttggctctgaagctgctcaagcgttgcaac
atcctccatgctgacatcaagccagacaacatcttggtaaacgagtcaaaaaccattctg
aagctttgtgactttggttctgcgtcacatgtcgctgacaacgacatcacaccgtatctc
gtcagcagattttacagagctccggaaattatcatagggaagccgtatgactacggcatt
gacatgtggtctgtcggctgcactttgtacgagctgtacaccggcagaatcctgcttcct
ggatcttccaacaatcacatgctcaagctggcgatggacctgaagggcaagatgcccaac
aagatgatccggaaaggattgttcaaagaccagcactttgatcagaacttgaactttctg
tacattgaagtagacaaagtgaccgaaagggaaaaggtgacagtgatgagcaccatcaac
cctaccaaagacctgctggcggaattaataggaggccagcggctacctgaggaccagagg
aagaaggtgatgcagctgaaggacctgttggagggcacactgatgctggacccagctaaa
cgcatcagcataaaccaggctctacagcacccctttatccaggagaagatctga
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