Kryptolebias marmoratus (mangrove rivulus): 108230535
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Entry
108230535 CDS
T05608
Symbol
hcn2b
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 isoform X1
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108230535 (hcn2b)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
108230535 (hcn2b)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
108230535
NCBI-ProteinID:
XP_017262336
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All DBs
Position
LG24:complement(14811874..14856184)
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AA seq
1044 aa
AA seq
DB search
MDEAEDGEEELKFLQPPPAASLTGCEDPYSGGDDDDGSGRGIRMKGVFTLRGGAASAARK
NSNNNELWLFPSEGSAPLWSQRDAAESDRRTRGDTVSEGPARMICNKNGDCRRDPTSSGS
LSSLISRQEKQADGAVASEDGRGPAASGEASVLSAGSLTQGPGCEVKTTAAMEKKDSRVS
FSNPPAGKGQLSGPQSRNSVTFSKAEDGSQIVPDDGDSRGNQTYMQRQFSSMLQPGVNKF
SLRMFGSQKAVEKEQERVKSAGNWIIHPYSDFRFYWDFTMLMFMVGNLIIIPVGITFFKD
ETTTPWIIFNVVSDTFFLMDLVLNFRTGIVFEDNTEIILDPKKIKKKYLKSWFVVDFVSS
IPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTY
DLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMVNDSWSELYSFAL
FKAMSHMLCIGYGRQAPESMSDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQE
KYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILEELNEPLREEIVNFNCRKL
VASMPLFANADPNFVTAMLTKLRFEVFQPADYIIREGTIGKKMYFIQHGVVSVLTKGSIG
MKLMDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAID
RLDRIGKKNSILMHKVQHDLNSGVFNNRENEMIQEIVKYDREMVQQVDVPRPRAMSMSSA
LPGGIFTPPASSTQPRDSAIATLQQAVAMNFCAPMQGNSVGTLQSPRMVRRFQVIQSVSS
PVSASPLQSQLLASSAFAPVLASPPVQSPLAARGRSFQYGSSALAGPISGSQLSLVQQHI
ASPAHRPSTHKSTHSLQLGSLSQDVRALSASQPSLPHEGGQPGVPSPPQSTRVSSTSIGP
PQTPLGPTSIRSAIPHRVILPHQMSAGAFPVASLPGSVHGYTTGAGLAVGGMGQGDMGPP
KKDSTASLPETEHIKVRSRLSSNL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggctgaggacggcgaggaggagctcaaattcctgcagcctcctccagcagcc
agtttgactggatgcgaggacccttacagtggtggtgatgatgatgatgggagcggcagg
gggatcaggatgaagggggtttttacgctcagaggcggggccgcgtccgctgcgcgcaaa
aactctaacaacaacgagctctggctctttccaagcgagggctccgcacctctgtggagc
cagagggatgcagcagagtcagaccgccggaccagaggggacaccgtttcagaggggccc
gccagaatgatctgcaacaagaacggagactgcaggagagatccgaccagttcggggagc
ctgtcttctctcatctcaaggcaggagaagcaggcagatggagccgtggcgagtgaagac
gggagggggccggctgcgagcggggaagcctcagtcctctcggcggggtccctgactcag
gggcccgggtgcgaagtgaagaccaccgcagccatggagaaaaaggactctagagtttct
ttctccaaccccccagctggtaaaggacagctctcaggtccgcagtcgagaaattctgtc
actttcagcaaagcggaggacggctctcagatagttccggacgatggagactccaggggg
aatcagacatacatgcagcggcagttcagctccatgcttcagccaggagttaacaagttc
tccctgcgcatgttcggcagccagaaggctgtggagaaggagcaggagcgcgtaaagtca
gcagggaactggatcatccacccatacagcgacttcaggttctattgggacttcactatg
ctgatgttcatggttggtaacctgatcatcatccctgtcggcatcaccttcttcaaggat
gaaaccaccacaccctggatcatcttcaatgtggtctccgacaccttcttcctcatggac
ttggtgctcaacttcaggacgggcatcgtgttcgaggacaacacagagatcatcctcgac
cccaagaaaatcaagaagaagtacctgaagagttggtttgtggtggacttcgtctcctcc
atacccgtggattatatcttcctcatcgtggagaaggggattgactctgaggtgtacaaa
acggcccgggcgctccgcattgtccggttcaccaagatcctcagtttgctgcgccttctg
aggctgtccaggctgatccggtacatccaccagtgggaggagatctttcacatgacctac
gacctggccagcgctgtgatgcgaatattcaacctgattgggatgatgctgctgctgtgt
cactgggacggctgccttcagttccttgttcccatgttgcaggactttccgtctgactgc
tgggtctctctcaacaagatggtgaatgactcatggagcgagctctactccttcgccctc
tttaaagccatgagccacatgctgtgcattggatatggaagacaggctccagagagcatg
tctgacatctggctgactatgcttagtatgatcgttggtgcaacctgctacgccatgttc
atcggccacgcaacggcactgattcagtctcttgattcatctagacggcaataccaggag
aagtacaaacaagtggagcagtacatgtcgttccacaaactcccggccgacttccgacag
aaaatccatgactactacgagcacagataccagggcaagatgtttgatgaggagagcatc
ctggaagagcttaatgagcctctgcgcgaggaaattgtcaacttcaactgccgtaagctg
gtggcttccatgccactgtttgccaatgccgatcccaactttgtgacagccatgctgacc
aaactcagatttgaagttttccagcctgcagactacatcatcagagagggcaccatcggc
aagaagatgtacttcattcagcacggggtggtgagcgttctgaccaaagggagcatcggc
atgaagctgatggacggatcctactttggagagatctgtctgctgacccgtggcagacgg
acagccagtgtgcgagcggacacctactgtcgcctgtactctctctcggtggacaatttc
aacgaagtgctggaggagtatcccatgatgagaagggccttcgagacagttgccatcgac
aggctggacaggataggcaagaagaactcaatcctgatgcacaaagttcagcatgacctt
aattctggtgttttcaacaatcgtgagaatgagatgattcaggaaatagtcaaatacgat
cgggagatggttcagcaggtggacgtaccacgaccgagggccatgtccatgtcgtctgct
cttcctggtgggatctttactcctccagcttcttccactcagcctcgagactcagcgatt
gccactttgcagcaggccgtggccatgaacttttgtgcccccatgcaagggaactcagtg
gggacactgcagtctccgaggatggtgaggagattccaggtgattcagagtgtatccagc
cctgtctctgcctctcccctacagtcccagctccttgcttccagtgcctttgctccagtc
ttggccagcccccctgtccagagcccactggcagctagaggacgatcattccagtatgga
tccagcgccctggctggtcccatctcaggctcccagctttctctggttcaacagcacata
gccagccctgcacaccggcccagcacacacaagagcacccattctttgcaactgggcagc
ctgagccaagatgtcagggcactgtcagcatcccagccctcactgcctcacgaggggggg
caaccaggtgtccccagtccacctcagtccacgcgagtttcctccacctccatcggacct
cctcagaccccgttgggtcccacaagcattcggagcgctattccacacagggtgattctc
cctcaccaaatgtcagccggcgcatttcctgtagcttctctgcccggttctgtgcatggt
tatacaaccggtgcaggactggcagtagggggcatgggtcagggagacatgggaccacct
aagaaggactctacagcgagccttcctgagacagaacacatcaaagtacgatccaggcta
tcgtcaaacttgtga
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