Kryptolebias marmoratus (mangrove rivulus): 108230554
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Entry
108230554 CDS
T05608
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
kmr03029
]
108230554 (polrmt)
Enzymes [BR:
kmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108230554 (polrmt)
Mitochondrial biogenesis [BR:
kmr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
108230554 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_3
PPR_2
Histone_HNS_N
Motif
Other DBs
NCBI-GeneID:
108230554
NCBI-ProteinID:
XP_017262366
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All DBs
Position
LG24:14758979..14804020
Genome browser
AA seq
1325 aa
AA seq
DB search
MSLLRACTFAKCFSRRSLLEKCALGQSFADYCRLCVSARNGAVRWISETPLHLQRRNVLS
VFPKSDDAKKRVLEQSQLLDVLEARIQQLQSDVVLDVQHAKVQFVKVPSCRRGVSSGRIP
TRGSLLEKTDIPKSGPSKGAYKSHPSRWMEKLFQEKKTKLRKLLHVQLNFQKSAEVLTVK
PKGNKSSLKAASTTHKTISSASERKRSGKKVSDEICAALSAPTTVSLVTAEKTATTSKAS
KWKGSKQKSSNKDGKAETSIDSEATKMDLAEIEELHKRLNQRVPHWTVQDKPEISQDGTG
SPCGDTHLSILAYLEACVFIGDIERSQNFLLSQHRVVSRRKHLTTDVYNIMMRVWAKKGT
LHQVGRIFILLEEAGLKPNLGSYCAALECMGRNPNCFPNTILRCLKQMEEDGLSIDDLFS
QCVFQHDERDLLLKAIHIIKPDYQPNLSLQTNQHYSPLVKDFYTQRENHSFPKLDFTQED
LQERFKRQLGVEEACTITIDSVEAVKPITADIAKMRALLAEQQAQWQKVLLQALGESKMI
LAKSNTKDHRLNLYPYLCLLEDREYVDIMIQSVSNLPPTGQSLRTLAKDLGNRVYTKYCV
QQKHQNHTVEKLQTIYNAYTDLLAKDTKVCNVLPREQWCQLEVEQGIGPLLQGDKSSWPL
IVTLDLGIYLVDLMVKNLKINSDILKPATGRKLIPILYHMYTFRSTQQIGFIKPHPILSQ
MQQGAMETKLTFDSYVMPMLCPPVPWTTVKFGAYLLTPTKLMRTIDGATHHKLLLEKCQN
LHAVFDSLNQLGNCAWKINKPILDIIISIFNDRGSDKLDIPPPLSEAPKVPHFNPHDPAY
TASEKANMKRQVISAKKKFNEMHSLRMDALYKLSIAHHMRDEIFWFPHNMDFRGRTYPCP
PYFNHLGSDMTRAMLLFTEGKPLGPKGLDWLKIHLVNLTGLKKKSSLQGRLDYGNSILED
ILDSAENPLNGKKWWMDADEPWQALACCMEIANAIRSPDPTQYISHFPIHQDGSCNGLQH
YAALGRDVIGATSVNLMPCEVPQDVYSGVAQQVEEFRARDAANDTKIAQVLKGFINRKVV
KQTVMTVVYGVTRYGGRLQIEKRLKETDDFPKDYVWEASHYLVRLVFSGLKEMFTGTREI
QDWLTESARLISKSGHSVEWVTPLGLPIIQPYHRTRSKVVRNKMQNINLQITHDAKERPD
TVKQKNAFPPNFIHSLDSTHMMLTSLHCHSAGLTFVSVHDCFWTHALTVDTMNKICREQF
VALHSQPILQDLSNFMLQKYCAGLLTDSTGKKSKEYKKLMLLLTKVPETGDFDLHQVKES
TYFFS
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttctaagagcatgtacctttgccaaatgcttcagtcggcgcagtttattggaa
aaatgtgctcttggccagtcttttgcggactattgccggctgtgtgtgtcggcgaggaac
ggcgcagtgagatggatatcagaaacccctttgcacctccagagaagaaatgttttgtct
gtattcccaaagtcagatgatgcaaagaaacgtgttcttgaacagtctcagctgcttgac
gtgcttgaggcaaggatccagcagctccagtctgacgtcgttttagatgtccagcatgcg
aaggtgcagtttgtgaaagttccctcttgtagaaggggtgtctcgtctggtaggattccc
accagagggtcactcctggaaaaaactgacattccgaaatcaggaccgtcaaaaggagcc
tataaatcacatcccagccgctggatggaaaaattatttcaggaaaagaaaactaaactt
aggaaactgctgcacgttcagctgaatttccagaaaagtgccgaagtgctaacggtgaaa
cctaaaggtaacaaaagcagcttaaaagccgcaagtacaacacataaaactatatcttct
gcttcggaaaggaagagaagtggcaagaaagtgtcagatgaaatttgcgctgcactttct
gcaccaaccacagtttcgcttgtcaccgcagaaaaaacagcaacgacaagtaaagcatct
aaatggaagggctcgaaacaaaagagttcaaacaaggatggaaaagcagagacgagcatc
gattccgaggccacgaagatggacctggctgagatcgaggagcttcacaaaagactcaat
cagcgagtaccccactggacagttcaagataaaccggagatctcgcaagatggcaccgga
agtccgtgtggggacacccacctcagcatcctcgcttacctggaggcgtgtgtgtttata
ggggacattgagcggtcgcagaatttcctgctcagtcaacacagagtcgtgagtcggcgc
aaacatctcactacggatgtttacaacatcatgatgagggtgtgggccaagaagggtact
ttacatcaggtcggccgcatctttattctgctggaagaagctggtctgaagccgaatctc
ggatcttactgtgctgcgctcgagtgcatgggtcgcaatccaaactgcttcccgaatacc
atactgaggtgtttgaaacaaatggaggaggacggcctgtctatagatgatctgttcagc
cagtgtgtgtttcaacatgatgagagagacttgctgcttaaagccattcacatcataaag
cctgactaccaacccaacctcagcctgcagacaaaccagcattattcacctctggttaag
gacttttacacacagagggaaaaccattccttccccaaacttgacttcacacaggaggac
ctccaggagcgttttaaacgtcagctcggtgtggaggaggcctgcaccatcaccattgat
tctgtggaagccgtcaagcccatcactgcagacattgccaaaatgagggccctgctggcg
gagcagcaggcacagtggcagaaggtgctcctgcaggccctcggggagagcaagatgatt
ctggccaaaagcaacaccaaggaccacaggcttaacctttatccatatctctgtctgctg
gaggatagggagtatgttgacattatgatacagagtgtttccaacctgcctcctactgga
cagtcactgaggaccttggctaaagatttgggcaacagggtctacaccaaatactgtgtg
caacaaaagcaccagaatcacacagtggagaaactgcaaactatttataatgcttacaca
gatctgctggccaaagataccaaggtgtgtaacgtccttcccagggagcagtggtgtcag
ctggaggtggagcaaggtatagggcccttgctgcagggggacaagtccagctggccgctc
atcgtaactctggacctgggcatttacctggtggatctgatggtgaagaacctgaaaatc
aacagcgacatcctgaaaccggcaaccggcagaaagctcatccccatcctctaccacatg
tacaccttccgcagcactcagcagattggcttcatcaaaccccaccccatcctgagtcaa
atgcagcagggggccatggagaccaagctgacctttgactcctatgtgatgccgatgctg
tgccccccggtgccctggaccacggtcaagttcggagcctacctgctcacgccgaccaaa
ctgatgcgcacgattgacggggccacccatcacaagctgctgctggagaaatgtcagaat
cttcacgcagtcttcgactcacttaaccagctaggaaactgcgcctggaagattaacaaa
ccaatcttagacatcattatttcaatcttcaatgaccgtggttctgataagctggacatc
cctccgcctctatccgaagcgcccaaagtacctcacttcaaccctcacgaccccgcctac
acagccagcgagaaggccaacatgaaaagacaggtgatcagcgctaaaaagaaattcaac
gagatgcacagcttgcgtatggacgccctttacaagctctccattgcccaccacatgcgc
gacgagatcttctggttccctcacaacatggacttcagggggcgcacctatccgtgtcct
ccgtactttaatcacctgggaagtgacatgacacgggcgatgcttctgtttacagaaggg
aagcccctcggtcccaagggtctggactggctaaaaatccacttggtcaacctgacaggg
ttaaagaagaagagctcactgcaggggcgtctagattacggcaacagtattttggaagac
atcctggattctgcagaaaaccctctaaatggtaaaaagtggtggatggatgcagatgag
ccgtggcaggctctggcatgctgcatggagatagccaatgcaataagatcacctgaccca
acacagtatatctctcacttccctattcaccaggacggctcctgcaatggtctccagcac
tacgctgctctgggcagagatgttattggtgccacgtcagtcaacctcatgccctgtgaa
gtgcctcaggatgtatacagcggagtagcacagcaggtggaggagtttcgagctcgggat
gcagcgaacgacacgaagatcgcccaggtgctgaagggcttcatcaacaggaaggtggtg
aagcagacggtgatgactgtggtgtacggagtcactcgctacgggggacgcctgcagatt
gagaaaaggctaaaggagactgatgattttcccaaggactacgtatgggaagcatcccat
tatctggtgcgtttggtgttcagtggccttaaggagatgtttacaggaaccagagaaatt
caggattggctgacagagagtgccaggctcatctccaagtctggccattctgtggagtgg
gtgacaccgctgggtttacccatcatccagccttaccaccgcacacgcagcaaagtggtg
aggaacaaaatgcaaaatataaacctccaaattacccacgacgctaaagagagacccgac
acagttaaacagaaaaatgcattcccaccaaacttcatccacagtttggactccacgcac
atgatgctgacttctctccactgccacagcgctggcctgactttcgtctcagttcacgac
tgtttctggactcacgccctcaccgtggacaccatgaacaagatctgtcgcgagcagttc
gtcgccctgcacagccagcccattctgcaggacctgtccaacttcatgctgcagaaatac
tgcgcaggacttttgactgattccacgggcaagaagtctaaggagtacaagaagctgatg
ttgttgctgaccaaagtgcccgagacaggtgatttcgatctccatcaggtgaaagaatcc
acttacttcttcagctga
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integrated database retrieval system
