Kryptolebias marmoratus (mangrove rivulus): 108230622
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Entry
108230622 CDS
T05608
Symbol
zfr2
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108230622 (zfr2)
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108230622 (zfr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
108230622
NCBI-ProteinID:
XP_017262484
LinkDB
All DBs
Position
LG24:10878569..10895761
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AA seq
1026 aa
AA seq
DB search
MAASNYFGFTHGAGPQYSTQPPSAYSHPSTATYSVQQASAVAHAVTASYSPAPVQAARPV
ASAPYPTYQSHQAPPDYTYRQPDPPQPTTTPQTYQVYSDMDSYSYVRPAAVTTYDNKQYY
QTSIAPAQRTPTDNYYQTVGVKSAYSPAPSTVYNQPPLPQRQVTALKPLVPSSAVSTTYN
IYPVSTSVQQPPTPISSYTLGSSFNCTVSASPYSGISYSSYDSAGYTSASTPSYYQPTQQ
TLSQPQPPPQQPHQPQTPIQPPPKQLTSSSWSNSGSNMVTAPTGNTYKKPAFHQNKLQRP
KGPPKQPQLHYCDICKISCAGPQTYREHNEGQKHKKKEAALKAGGQSGASNGPRGVQTQL
RCELCDVSCTGVDAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPVLVNNSAPAITTSTAGK
PAAPSSVSSSVSAISAPAVALKPVAANTSTKITPPVKKSAPSKITLISNKPSNTPAAPAA
APVTAKVVESVQPSVQKVEPLSEDERVGGGQGDIQPVGHDYVEEVRNEDGKVIRFHCKLC
ECSFNDPNAKDMHLKGRRHRLQYKKKVNPELPVEIKPSNRAKKLQENKLKKQKQKAVLKR
QRDDEQRWHMEMRRYEEDLYWRRMEEEQMYWGEQRRRLAPPPLMSRPGMPVPPLLNCVRR
PDSADDRHIMAKHSAIYPVEEELQAVQRIVSHSERALKLVSDSLLEKETTITTDTAQEGE
EKSAENAARLLKGVMRVGILAKGLLLRGDRNVELILLTAKKPTISLLKNITKQLPKELTT
FSEDQYEVQAHPEEANIVIISSQEPKMQVTISLTSPLMREDPAAEGDKQAGGKAAEKDVP
EKDPPDLLSKKKCLEYLAALRHAKWFQARANGLQSCVIIIRVLRDLCQRVTTWGRMPCWA
MELLVEKVISSATGPLSPGEAMRRVLECVSSGILLPDGPGLMDPCEKGQTDALESMTLQA
REDITSSAQHALRLLAFRQIHKILGMESLPVSKASARNRKRRRDVNETGEGEGEGKKDKK
EDEATA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggctgctagcaactatttcgggttcacacatggtgccggtccgcaatacagtacccag
cctccctcggcctactcccacccctctacagccacctacagtgtccagcaggcttcagct
gtggcccacgcggtgactgcgtcctactctccagctccagtccaggcagcccggcctgtg
gcctcagccccctaccccacctaccagagccaccaagcacctccagattacacctacagg
cagccagatccaccacagcccaccaccacccctcagacgtaccaggtatactctgacatg
gacagctacagctacgttcgtcccgcggctgtgacgacatacgacaacaaacaatattac
cagacgagtatagctccggctcagaggacacccacagataattactaccagactgtagga
gtgaagagcgcttacagcccagctccttccactgtgtacaaccagcctcctctgcctcag
aggcaggtaactgccctaaaacccctggttccctccagcgccgtgtctactacctataac
atttacccagtgtccaccagtgtccagcagcccccaacgcccatttcatcgtacaccctc
ggctcgtcgttcaactgcactgtctcagcctccccctactctggcattagctactccagt
tatgattctgctggctacacctctgcgtccaccccctcctattaccagccgactcagcag
actctctcccagccccagcctccacctcagcagccccatcaacctcagacccccattcag
ccgccgcccaagcagctgacaagttcctcttggagcaactcagggagcaacatggttacg
gctccgaccggaaacacttacaaaaagcctgcttttcaccagaacaaactgcagaggcct
aaagggcctcccaagcagcctcagcttcattactgtgacatttgcaagatcagctgtgca
ggccctcagacctaccgggaacataacgaaggacagaagcataaaaaaaaggaagcagcc
ttaaaggcagggggacagagtggggccagcaatgggcccagaggagtccagacccagtta
cgctgcgagttatgcgacgtatcgtgcactggagtggacgcctatgctgcacatatccgc
ggggccaaacaccagaaggttgtgaaacttcacaccaagctcgggaagccgatcccgtcc
actgaaccagtgctggtgaataattctgctccagctataacgacctcgacggcagggaaa
cctgcagcgccgtcctccgtgtcctcctcagtttcagccatttcagcccctgcagtggcg
ctcaaaccagtggctgcaaacacctccaccaaaataaccccaccagtcaagaaatcagct
ccctcaaaaataacactcatttctaataaaccaagcaatactccagcagcaccagcagca
gctccggtgacagctaaagtggtggagtctgttcagccatcggtccagaaggtggagcca
ctgagtgaggatgaacgagtcggaggaggccagggggacatccagcctgtgggccatgac
tatgtagaggaggtacgtaacgaggacggaaaagtgattcgattccactgtaagctgtgc
gagtgcagcttcaacgatcccaacgctaaagacatgcacctgaagggaagaaggcacaga
ctgcagtacaagaaaaaagtcaaccccgagcttcctgtggagattaagcccagtaatcgt
gctaagaagcttcaggaaaacaagctgaagaagcagaagcagaaggctgtgctgaagaga
cagagagacgatgagcagcgctggcacatggagatgagacggtatgaggaggacttgtac
tggagaaggatggaggaggagcagatgtattggggggagcagaggcgcaggctggcccct
ccacctttgatgagtcgccccggtatgccggtgccgcctctactgaactgtgtccgccgc
cccgactctgctgacgaccggcacatcatggccaagcactccgccatttacccggtggaa
gaggagctgcaggctgttcagaggatcgtctctcattctgagagagctcttaaactggtg
tctgactccctgctggagaaggagacgactataaccactgatactgctcaggaaggggag
gaaaaaagtgctgagaatgctgcccggctgctaaaaggtgtgatgagggtcggtatcctg
gccaaaggcctgctgctgcgcggggacagaaacgtggagctcatcctgctaacggctaag
aaacccaccatctcattactgaagaacatcaccaaacagctgccgaaggagctgacgaca
ttttctgaagatcagtatgaggtgcaggctcaccccgaggaggccaacatcgtgattatt
tcaagccaggagcccaaaatgcaggtgaccatttccctcacctcgccactgatgagggag
gaccctgctgctgagggggacaagcaggcaggaggaaaagcggctgagaaagatgtgcct
gagaaagatcctcctgaccttttgagcaagaagaaatgtttggagtacctggctgctctt
cgtcacgccaaatggtttcaggctcgtgcgaatggattgcagtcctgcgtgatcatcatc
cgtgtgctgagagatctgtgtcaacgcgttaccacttgggggagaatgccttgctgggcg
atggagctgctggtggagaaggtgatcagcagcgccacaggcccgctcagtcccggggag
gccatgcgccgggtcctggagtgcgtctcctcgggcattctgctgccagacggaccaggt
ttgatggacccttgtgagaaagggcaaacggatgctttggagagcatgactcttcaggct
cgggaggatataacttccagcgctcagcatgccctgcggctgcttgctttccgtcagatc
cacaagattttaggcatggagtccctgccggtgtccaaggcgagcgcacgcaaccgcaag
cgccgacgggacgtcaacgagaccggcgaaggagagggggagggcaagaaagacaagaag
gaagacgaggcgaccgcttga
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