Kryptolebias marmoratus (mangrove rivulus): 108230629
Help
Entry
108230629 CDS
T05608
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108230629 (ccdc50a)
Membrane trafficking [BR:
kmr04131
]
Autophagy
Other autophagy associated proteins
Others
108230629 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
108230629
NCBI-ProteinID:
XP_017262501
UniProt:
A0A3Q3BJ34
LinkDB
All DBs
Position
LG24:10106339..10121294
Genome browser
AA seq
702 aa
AA seq
DB search
MAECNISIDKNKLPGVKEVCRDFAVLEDHSLAYNLQEQEIESHLASNVHKSRLVQQDLQV
AKKLQKEEDEIAKIQSQKQNNDIERQDNEIAQEIQEELVRLEEQQRLQQEEEDAAIARQL
QEKEKVKEEKRKQKQIEANFQEDYYEDRGAALPLDVDKHTRHKSLSPGRYDSYSPELSHR
DRTPDYHSADPKRNRHPKQDSAAPLGLPKYPEHYSGTEGGRSRHADPYPEHLLPPRGRHE
DGYPEFEPEHTGRAREDSGRDADRVVRRKERPARPPPPMSLVEKDEGWNRERQRHDRGRD
YNLDKRVEKNYRRGGEKSRERLASGDRYEDRDNSDKRVEKEYRRDREKSRERLTSGDRYE
DRDNSDKRVEKEYRRDREKSRERLTSGDRYEDRDNSDKCVEKEYRRDREKSRERLTSGDR
YEERDRPRQKDKDRRRGRSRDRGLDADFLERGHSRDRPREIRSSWEEEEVDGERRARSRQ
RVHSNPIEVFDEYLNDKGRGDGRETWDPQHGDGSHTYTNKETGRIVHKGSGAVITETGYG
LGEATQGLTDLDLRELELKDMEVARRLQEEELKASNVHGRAAQVAKDEELARRLAEHEKK
EYRKNREREKERERLPSDRSGMEKRRHEGNHRQHSEEVVRPRTRDEYEYQRQRNHHKPSR
PPHPRTHEYENVNSGYGYSGHPAPPRPTTRPDAAYRGASQKR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatgtaacattagcatcgacaagaataaactaccgggagtgaaagaggtgtgc
agagactttgctgtgctcgaggaccacagcctggcctacaacctccaggaacaagaaatt
gagagccacttggcttccaacgtccataagagccgcctggtgcagcaggacctgcaggtg
gccaagaagctgcaaaaggaggaggacgagattgccaagattcagagccagaaacaaaat
aatgacattgagcggcaagacaatgagatcgcacaggagattcaggaagaactggtccga
cttgaagagcagcagcgactgcagcaggaggaggaggacgcagccattgctcgacagttg
caggagaaggagaaggtgaaagaagaaaaaaggaaacaaaaacagattgaagccaatttt
caggaggattattatgaggatcgaggagctgcactgccccttgatgtggacaaacacacc
cgtcacaaatcgctgtctcctggccgatacgattcgtactctccagagctctcgcatagg
gatcgcactccagattaccactcggcagatcccaaaaggaacaggcacccgaaacaggac
tcggcagcccctcttggccttcccaaatatccggagcactactcggggacggaaggaggg
cgtagccggcacgcagatccatatccagagcacctgctgccccccagaggcaggcatgaa
gacgggtatccggagtttgaacctgagcacaccggaagagcaagagaagacagtggcaga
gatgctgatagagtggtgaggaggaaggagagaccagctcgaccacctccaccaatgagt
ctcgtggagaaggatgagggctggaacagagagagacaaagacatgacaggggacgagat
tataacctggacaaacgtgtggaaaaaaattacagaagaggcggggaaaaatccagagag
cgattagctagtggggacagatatgaggacagggataactcggacaaacgtgtggaaaaa
gagtacaggagagacagggaaaaatccagagagcgattaactagtggggacagatatgag
gacagggataactcggacaaacgtgtggaaaaagagtacaggagagacagggaaaaatcc
agagagcgattaactagtggggacagatatgaggacagggataactcggacaaatgtgtg
gaaaaagagtacaggagagacagggaaaaatccagagagcgattaactagtggggacaga
tatgaggagagggatagaccgagacaaaaagacaaagataggcggcggggcaggagcagg
gaccggggactcgatgcagactttttggaacgaggacacagcagggaccggccaagagag
atcaggtcctcctgggaggaggaagaggtggatggcgagaggagggccaggagccggcag
cgtgtccactccaaccccatcgaagtgtttgacgagtacctaaacgataaaggacgagga
gacggcagggagacgtgggacccccagcatggggacggcagtcatacttataccaacaaa
gagacaggtcgtattgtgcacaaaggaagcggagcggtgataacagagaccgggtacgga
ctgggtgaggccacccaggggctgacggatctggatctccgcgagctggagctgaaggac
atggaggtcgcgagaagactccaagaggaggagctcaaggcgagcaatgtgcacgggcgt
gcagctcaagtggcaaaagatgaggaactggcccggcgcctggcggaacatgagaagaag
gagtacagaaagaatcgagaacgggagaaggagcgggagaggttgccctcggatcggtcg
gggatggagaaaagacggcatgaaggaaaccacaggcaacattcggaggaggttgtgcgg
cccagaacacgagacgagtacgaatatcagaggcagagaaaccaccacaaaccttccagg
cctcctcatcctcgtacacatgagtatgagaatgtgaactccggctatggctactcgggc
caccccgctccccctcgtcccaccacaagacccgatgctgcttacagaggtgcctcgcag
aagcggtga
DBGET
integrated database retrieval system
