Kryptolebias marmoratus (mangrove rivulus): 108230728
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Entry
108230728 CDS
T05608
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108230728 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108230728 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
kmr04131
]
108230728 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
kmr03029
]
108230728 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108230728 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108230728 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
108230728 (si:dkey-110c1.10)
Membrane trafficking [BR:
kmr04131
]
Others
Actin-binding proteins
Myosins
108230728 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
kmr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108230728 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108230728 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
Myosin_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
108230728
NCBI-ProteinID:
XP_017262666
LinkDB
All DBs
Position
LG24:14301053..14314714
Genome browser
AA seq
1654 aa
AA seq
DB search
MATLELYTKGASVWVPDPDSVWVSAQLLQDFRPGEKQLLLQLPDGREVHHPVGSLSDLPP
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYEQLPIYGE
EVVDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIVISGESGSGKTVSAKFTMRYFA
VVGGAAQRTSVEERVLSSNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIVGANMRT
YLLEKSRVVFQASSERNYHIFYQLCASRDLPEMRALKLDAPKHFRYTNQGGDTRIPGTDD
LSDLERTRSALTTLGVLPEQQLELFRIVSAVLHLGNVNIQASGRSSDRSYIDAQDGALAA
FSKLLGVEGSQTAHWLCHRRLAVGGELLVKPVSGQQALEARDALAKHIYGQLFTWTVQRL
NSALRSQRSKAKSFIGVLDIYGFETFEWNSFEQFCINYANEKLQQQFNRHVFHLEQEEYV
REELAWNRIEFSDNQQCINLIEGQLGMFDLLDEECRMPKGSDESWVLKLYDQHLTSKPHP
HFRKPRMSNSAFIILHFADTVQYECSGFLDKNRDTVFEELINILRASQSELVAELFQQQG
NAPNVANGSVRSGKRATREHKLTVGFQFRQSLEMLMDTLNSTTPHYVRCIKPNDLKEPFM
FDPRRTVQQLRACGVLETIRISAAGYPSRWTYEEFFSRYRVLLRGPQSQAQAQALCRQNL
PQLIQDPDQYCFGKTKVFFRAGQVALLERLRAERLRVAAVIIQSRVKGWLGRLRYGRICW
AAGTIQRYSRGTLARRLALTLHYTKAALVIQKTFRMVVVRQLFVMIRQATVTIQAFTRGT
LARRTYKRLVAERAAALLQARVRGWLARRAYGRVRAAVVFMQCCARRKASRRELLKLKAE
ARSVERYRELNKGMEVKLMQLQLRVDQEVRQSAALRETLTAEREAASAELEALRAIVQKL
ETQKQEKLPPDPVESEKEVEERRRAEERTAQEILRLTQELQMLQTEKDNVYIEKMDVSAR
LLEQKKTQQECVHQAVLQASADLRSELDDERMKYQSLLKDFTRLEQRYDNLREMSLLTER
SKGHRRTDSTQSLSFEPLSPSSTPLSMSPFPSAFPSPEAVRRISVTSPSDERRHPAWSPE
TQMEQLMEKMDVPKDPAVKMKREDLELAYDAVRVANKFLESQLRQQHSRWEEELSAVRSQ
LSQAISASSSAAQTQDIWELLEAREQECARLRRELKELKTTVSLRRLLSHVFPSALTAEA
SCLPQLKPAAVSGLLECRKRDETKLIKNLITDIRADVALSLPPGLPASILFLCVRQADCG
GDQGRARSLCGAAVTAMKAAMKKHVNDLDMTVLWLKNVCLLHDLLVQHSPKQSHDSNELV
PLTFDLSNLIRTLSDLCIQGYQQLLFITEARLQKLIVPALLESETIAGLSGSAVKLGASR
KRAGSIPRPVGGDAPTMAPVLRELEGLHAALTQQALPLSLTEQAFRQLSHFICACALNNL
LLRKDMCSWSRGMQIRYNVSLLEECLRSRGLQAGGAVATLEPLIQATQLLQVGKKTDADA
RAIVQTCTALSSKQIVKILTVYSPHSDLDEKVSLNFIRTVQELLKGASDSQPPQLLMDVR
RVFPVTFPYSPPPAISAEGLVIPDSLKISFLHRA
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctcgaactttacaccaagggggcgagcgtgtgggtccctgacccggactcg
gtgtgggtttcagctcagctcctgcaggacttcaggcccggagagaaacagctgctgctg
cagctccccgatggacgcgaggtccatcatccggtgggttctctgtccgacctccccccg
ctggggaaccccgacatcctggagggcgagaacgacctgacggctctcagcttcctccat
gagcccgccgtgctgcacaacctgcgggtccgctttctggactacagcagcatctacacc
tactgcggtattgtgttggtggccatcaatccttacgagcagctgcccatctacggcgag
gaggtggtcgacgcctacagcggccaggacatggccgacatggagcctcacatcttttct
gtggcggaggaggcctaccgcaccatgaccagggaggagaagaaccagtccatcgtcatc
agcggggagtctggctcggggaaaaccgtctcggccaagttcaccatgagatacttcgct
gtggtcggaggcgccgcgcagcggactagcgtggaggagagggtcctgtcctcgaacccc
atcatggagtctataggaaacgccaaaaccacccgaaatgacaacagcagccgtttcggg
aagtacatagagatcggctttggcaggaagggggacatcgtcggggcaaacatgaggacg
tacctgctggagaagtccagggtcgtcttccaggcgtcctcagagagaaactaccacatc
ttctaccagctgtgtgcctccagagatctgcctgaaatgagagcactcaaactcgacgca
ccgaaacatttccgctacaccaaccagggcggagacacgcgcatacccggcaccgatgac
ctgtccgacctggagcgcacgcgcagtgccctcaccacgctcggtgtgcttcccgagcag
cagctggagctcttcaggatcgtgtcggctgttctgcacctggggaacgtcaacattcaa
gccagtgggagaagctctgacaggagttatatagatgcacaggacggcgctctggccgcc
ttctccaagctgctgggagttgaaggatctcagacggcccactggctgtgtcaccgcaga
ctggcagtgggaggggagctgctggtaaaacctgtgagtggtcagcaggctctagaagcc
agagatgctctcgcgaaacacatctacggccagctgtttacatggactgtccagaggctc
aactcggccctgcgcagtcagaggtcaaaggccaaatccttcataggggtgctggatatc
tacgggtttgagacttttgagtggaacagttttgaacagttctgtataaattatgccaac
gagaagctccagcagcagtttaaccggcacgtgttccacttggagcaggaggagtacgtg
cgggaggagctggcctggaacaggatcgaattcagtgacaatcagcagtgcatcaacctc
attgagggccagctggggatgtttgacctgttggacgaagagtgcaggatgccaaagggt
tcggatgaaagctgggtcctcaaactgtacgaccaacacctgaccagtaagccccatccc
cacttcaggaaaccccgcatgtccaacagcgccttcatcattctgcactttgctgacacg
gtgcagtatgaatgctctggctttctggacaaaaaccgagacacagtcttcgaggagctc
attaacatcctcagagcaagtcagtctgagctggtggctgagttgttccagcagcaggga
aacgcgcctaacgtagccaatgggagcgtccgttcagggaaaagagcaaccagagaacat
aaactcactgtaggcttccagttccgtcagtccttagagatgttgatggacactcttaac
agcaccaccccgcactacgtccgctgtattaaacccaacgacctcaaagaaccttttatg
tttgaccctaggaggaccgtgcagcagctgagagcctgtggagtgctggagactattcgt
atcagcgcagcaggttatccgtccagatggacgtatgaggagttcttcagcaggtaccgg
gttctgcttcggggcccgcagagccaggcccaggcccaggctctgtgcaggcagaacctg
cctcagctcattcaggacccggaccagtactgctttgggaagaccaaggtatttttccgc
gcgggccaggtggctcttctggagcggctgagggctgagcggctgcgagtggctgctgtg
atcatccaaagtcgagtcaaaggctggctgggccggctcagatacggccggatctgctgg
gcggctggaaccatacagcggtacagcaggggaactctggcccgacgtttggctctgacg
ctgcactacactaaggctgccttggtgatccagaagaccttccgtatggtggtggtccgg
cagcttttcgtcatgatccgccaggccaccgtcaccatccaagccttcaccaggggaacg
ctggcacgccgcacatacaaacggttggtggcagagagggccgcggcgttgctccaggcg
cgagtgcgtgggtggctggcgaggcgggcgtacgggcgtgtgcgggcggcggtggtgttc
atgcagtgctgcgcgcgccgcaaggccagcaggagggagctgctgaagctgaaggccgag
gcccgctcggtggagaggtacagggagctcaacaagggcatggaggtgaaactgatgcag
ctgcagctccgagtggaccaggaggtaaggcagagtgctgctttgagagagaccctcact
gcggagcgagaggctgccagtgccgagctggaggcgctgagggccatcgtacagaaactg
gagacccagaaacaggagaagcttccccctgatccagttgagagtgagaaggaggtggag
gaaaggaggagagccgaggagagaactgctcaggagatcctgcgactcacacaggagtta
caaatgctacagacagaaaaggacaatgtttacatagagaaaatggatgtctctgctcgc
ttgcttgagcaaaaaaaaacacaacaagagtgtgtgcaccaggctgtgctgcaggccagc
gcagatctccgctcggagctggacgatgagagaatgaagtatcagagtctcttgaaagac
ttcaccaggctggagcagagatacgacaacctcagggagatgagtctgctcaccgagcgc
agcaaaggccaccggcggaccgactccacccagagtttgagcttcgagcctctttctcct
tcctcgactccgctgtccatgtcacccttcccctctgcgttcccttccccggaggcggta
cggaggatcagcgtgacgtcgcccagcgacgagaggagacacccggcgtggagcccggaa
acacagatggagcagctgatggagaagatggacgtgcccaaagaccccgccgtgaagatg
aaacgagaagacttggagctcgcttacgatgccgttcgagtagcgaacaagtttctggag
agtcagctccgtcagcagcacagccggtgggaggaggagctcagcgctgtgaggtcccag
ctcagccaggccatctctgcttcctcctctgctgcacagacacaggatatctgggagctg
ctggaagccagagagcaggagtgtgcgcggctgaggagggagctgaaggagctgaaaacc
acagtgtcgctcagacgtctcctgtctcacgttttcccatcagctctgaccgcagaggct
tcctgtctgcctcagctgaaaccagcagctgtcagcggcttgttggagtgcaggaaaaga
gacgaaaccaaactcattaagaatctcatcacagacatccgagcggacgtcgctctgtct
ctgcctcccggcctgcccgccagcatcctcttcctgtgcgtccgtcaggccgactgcggc
ggagaccaaggccgagctcgctcgctctgcggcgctgccgtcaccgccatgaaggctgct
atgaagaaacatgttaatgacttggatatgactgtgctgtggctgaaaaacgtttgtctg
ctgcacgacctgttggtccaacactccccaaaacagagccatgactcaaatgagcttgtt
cctttgacctttgacctgagcaacttgatccgcaccctgagtgacctgtgcatccagggc
tatcagcagctcctcttcatcacagaggcgcgcctacagaagctcatagtcccagccctg
ctggagagcgagaccatcgcaggtttgtccggctcagccgtgaagctgggagcatccagg
aagcgagcgggctcgatccccaggccggtgggaggggacgcccccaccatggcgcctgtg
ttgagggagctcgaaggccttcacgccgccctgacccagcaggctctgcccctcagtctg
acggagcaggccttcaggcagctcagccacttcatctgcgcctgcgctctcaacaacctg
ctgctgaggaaggacatgtgcagctggagccgcggcatgcaaatacgctacaatgtgagc
ctgctggaggagtgcctgcggagccgaggtctgcaggcagggggtgccgtggccacattg
gagcccctcatccaggcaactcagctgctgcaggtggggaagaagaccgacgccgacgct
cgggccatagttcagacctgcactgccctctctagcaaacagattgtgaagattctgact
gtctacagtccgcacagtgatctcgatgaaaaagtctctctgaatttcatccgcacggtc
caggaacttctgaaaggcgcctctgacagtcagcctccgcagctcctcatggacgtgcgg
agagtgtttcctgtcacattcccctactcgcctccacccgccatcagcgccgaaggatta
gtcatccccgactccctcaagatctcctttctgcacagagcctga
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integrated database retrieval system
