Kryptolebias marmoratus (mangrove rivulus): 108230821
Help
Entry
108230821 CDS
T05608
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108230821 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
kmr03310
]
108230821 (rorca)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108230821 (rorca)
Nuclear receptors [BR:
kmr03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
108230821 (rorca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Cor1
Motif
Other DBs
NCBI-GeneID:
108230821
NCBI-ProteinID:
XP_017262875
UniProt:
A0A3Q2ZKA9
LinkDB
All DBs
Position
LG24:complement(13364922..13379495)
Genome browser
AA seq
474 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNARYSCSRQRNCLIDRTNRN
RCQHCRLQKCVALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSLECAGAGAREDNSNMAD
HNCAYRRGSSAALSDLDDITTLPEGLLFDLPLTPEDAGGEYCNLDMLGGSAGSSSSSQSS
PEQSSLDFADGNNSIKHEYQLLHDSGLFSHAIVNPVPESCSLLEIEHIIQSVVKSHIETS
QYSTEDLKRLAWSLYSPEETRSHQTKSAEVMWQQCAIHITNAIQYIVEFAKRISGFMDLC
QNDQIILLKAGCMDVLLIRMCRAFNPINNTLLFDGKFASPQLFKALGCDDLVSAVFDFAK
NLSRIQMSEEEMALFSAAVLLSPDRQWLTDVQKIRKLQDKVYMGLQRCLQKEGVSDEKLA
KMVSKLPAMRSICNLHIDKLEFFRLVHPETAFTFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtgattccttgtaaaatctgtggggataaatcatcaggcatt
cactacggtgtcatcacctgtgaaggctgcaagggtttctttcggcgcagccagcaaaac
aacgccaggtactcttgctcacgacagaggaactgcctaattgaccggaccaaccgtaat
cgctgtcagcactgcaggctgcagaaatgtgtcgctctcggcatgagccgtgatgctgtg
aagtttggtcgcatgtccaaaaagcagcgtgacagcctgtacgcagaggtccagaaacac
cagcagtccctggagtgcgccggagccggtgcccgcgaggacaacagcaacatggccgac
cacaactgcgcgtacaggagaggctccagcgccgccctcagtgacctggacgacatcaca
acgctgccagaagggctgctttttgatctgccgctgaccccggaagatgccggtggagag
tactgtaacctggacatgctgggcggaagcgcgggcagcagctcgtcctctcaaagctcg
ccagagcagagcagcttggactttgctgatggcaacaacagcatcaaacatgagtaccaa
ttgttgcacgattctggactcttctcacatgcaatcgtcaacccagtgccagagagctgc
tccctactggagatagagcatataattcagagtgtggtaaagtcccacattgagacaagc
cagtacagcacagaggacctgaagagactggcgtggagtttgtacagtccagaagaaaca
cgctcgcaccagaccaagtcagctgaggtgatgtggcagcagtgtgccattcacatcacc
aacgcaatccagtacatagtggagtttgcgaagcgcatctctggcttcatggacctctgt
cagaatgatcagattatcctcctcaaagcaggctgcatggatgttcttctgatccgtatg
tgccgggcctttaaccccatcaataacacgttgctcttcgatggaaagtttgcctctcct
caactttttaaagctctgggctgcgatgaccttgtgagtgcagtgttcgactttgccaag
aatctgagccgcatccagatgtcggaagaggagatggctctcttcagtgctgctgtgctg
ttgtcaccagaccgacaatggctgacggacgtccagaaaatccggaagttgcaggacaaa
gtttatatgggtctgcagcgctgtctgcaaaaagagggggtgtcagacgagaagctagcc
aagatggtgtccaagcttcctgcaatgaggtccatttgcaaccttcacattgacaaactg
gagtttttccgcctggtccacccggagacggcgttcacgttccctcctttgtaccgagag
gttttcggcagtgaaatcaccttcccggactccacagagggctag
DBGET
integrated database retrieval system
