Kryptolebias marmoratus (mangrove rivulus): 108230997
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Entry
108230997 CDS
T05608
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04510
Focal adhesion
kmr04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108230997 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108230997 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
CENP-H
Pacs-1
Motif
Other DBs
NCBI-GeneID:
108230997
NCBI-ProteinID:
XP_017263203
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Position
LG14:12039280..12084583
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AA seq
1218 aa
AA seq
DB search
MGNIGWRSHVSSEDTDSSVRGDQDEDSDSQRSHLSTLTMILKDKFHSPKIKRTPSKNRKQ
LQPEPAAKSTEKPANKKVSRLEEQEKEVVSALKYFKAIVDKMMVERKVLEMLPGSASKVL
EAILPLVQVEARIQHSSALSSCHSRVYQSLANLIRWADQVMLDGIDLDDQEMVASVKNVI
KAVLDGVKELVKLTIEKQEHPSPTTPNKPAPPVTAAESSVSVEIPLIEREQEVSNKMAPA
ASPAEATPELQDEDVAPPKPPLPEAKMAELRAQLSADAGQRKPSQKENPPPALPPKKRQS
APSPTPVAVVAPMSRGSSLPCSDHRQEYEHEFFQRRFSGGSHSYGGDSPRLSPCSSMGKL
SKSDEQLSSMEQDSGQCSRNTSCETLDNTENYDPDYDFLHQDLSVGDNLPSIPVGGCLSP
LPESHSESSSPVPGQHPSHPHYSAPPLQQPEYWTPQLNQTNPLQSSRISAPPALPLKKRR
STQTSPFPDGGSRVLYERYPSQYDNLSEEELHPTPPFPLFTPISPMPQTNGGVFVSQYIA
SENADVPASPPPLPEKKSRHILQYMQFVEDYSEPQPSVFYQMPQSESIYEQRNKLFQEVY
GFNDSFSSTDSVHEPLQPPALPPKQRQLASHSSSPSSSSSSSLSCHLQPSVAAMEEAGSV
LGLSMSVSNSCLIGQVSLTTPTNLDQVALTNATILDGSGGGPNGSLAGSLGSVAVCLPSE
SSLTDSLHTSASESVNDEGGEGEYVNLYSSSQANGELPLSLRETIASDDVLQDPVPQMPS
SNSKDALDKERRQKATELAGSDEEDVDELSLIDHKEIMSRITLKQENDDGPDVRAGSGDI
LLVHATETDRKDLVLYCEAFLTTYRTFITPEDLIKKLHYRYTTFCHSPDIFKKRVSKNTF
FVLVRVVDELCLVELTEDILKQLMDLVFTLVCNGELSLARVLRKNILDKVEQKKLLRYTN
SLKPLAARGVSARPGTLHDFRSHEVADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNL
TQFTEHFNNMSYWVRSLIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSA
PIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGN
PDLIDGKVNFSKRWQQFNILDSMRRFQQVHYELKRNEDIISFFNDFSDHLAEEALWELSL
KIKPRNISRRKTDREEKT
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatataggctggaggagccatgtgtcttcagaggacacagactcctctgtacga
ggggatcaagatgaggactcagactcgcaacggtcccatttgtccactttgaccatgata
ttgaaggacaagttccactcacccaagatcaagagaactccatccaaaaatcgaaagcag
ctgcagcccgagccagcagccaagagtactgaaaaacctgctaacaagaaggttagcaga
cttgaggaacaggagaaggaagtggtcagcgctctaaaatatttcaaggcaattgtggac
aaaatgatggtggagaggaaagtgctggaaatgctaccaggctctgccagcaaggtgctt
gaagcgatcttgcctctggttcaggtggaggcgcggatacagcatagttcagcgctgtct
tcttgccatagccgtgtatatcagagtctcgccaatctcatccggtgggcagatcaggtg
atgctggatggcatcgatctggatgaccaggaaatggtggcctccgtcaagaatgttatc
aaagcagtgctggatggagtaaaggaattagtgaagctgaccatcgagaaacaggagcat
ccatcacccaccaccccaaacaaaccagcaccacctgttactgcagcagagagcagcgta
tcagtggagatacccctgatagagcgcgagcaggaggtctcaaataagatggctccagca
gcttctcctgcagaggccacccctgaactacaagatgaggatgtggcccctcccaagccc
ccgcttccagaagccaaaatggcagagctcagagcacagttgagcgctgatgctggccaa
aggaaaccctctcagaaggagaatccaccaccagctcttccacctaagaagcgccagtca
gccccttcaccaacaccagtggcagtggttgccccaatgagccgtggctccagcttgccg
tgtagcgaccacagacaggagtatgaacatgagttttttcagaggcgtttctctgggggc
agccattcgtacggtggagactctcctcgtctgtctccgtgcagcagcatggggaaactc
agcaagtccgatgagcagctttcttccatggagcaggacagcggtcagtgttctcgtaac
accagctgtgagacgcttgacaacacggagaattatgacccagattatgacttcctccac
caggacttgtctgttggggataacctgccttcaatacctgtaggaggctgcctgagcccc
ctgccagagtcccacagcgagtcttcgtcccctgttcctggacagcatccctcacatccc
cactatagtgctcctcccctccagcagccagaatactggactcctcagctcaatcaaact
aatcccctacagtcctcccgcatcagcgccccccctgccctgccgctgaagaaacggcgc
agcacgcaaacgtcgccctttcccgacggaggctctagggtgctgtatgagcgctacccc
tcccagtatgacaacttgtcagaagaagagcttcaccctacaccaccattcccccttttc
acgcccatctcacccatgccccagacaaacgggggcgtctttgtttcccaatacattgca
agcgagaatgcagatgttccagccagcccgccgccgctgccagaaaagaaaagcagacac
attcttcaatacatgcaatttgtggaggactactcggagccacagccctctgttttctac
cagatgccacagagtgaaagcatctatgaacagcgtaacaagcttttccaagaggtttat
ggcttcaatgactccttcagcagcactgactcagttcacgagcccctgcagcccccagca
ttgccaccgaaacaaagacagctggcctcccactcctcttccccttcttcctcttcctcc
tcttctctctcctgccacctccagccgtctgtagcggccatggaggaggcgggctctgtg
ctgggcctcagcatgtccgtctctaactcctgtctgattggccaggtgtctttgaccacg
cccacgaacttggaccaggttgccttgaccaatgccaccattctggatggcagcgggggc
gggccgaacggttccctggctggctctctgggttctgtggctgtctgtcttccttctgaa
tcttctctcactgactctctccacacctcagcgagcgaaagcgtgaatgacgagggaggg
gagggggagtatgtcaacttatactcatccagccaggccaatggggagctgccgctctcc
ctcagagaaaccatcgcaagtgatgatgttcttcaagaccccgtccctcaaatgccatcc
agcaatagtaaagatgctttggacaaagaaaggaggcaaaaggcaacagaattggctggg
agcgatgaggaagatgtggatgagctgtccctcatagaccacaaggagattatgagcagg
ataacactaaaacaagagaacgacgacggccctgatgttcgtgctggatcaggagatatc
ctattagtccacgcgacagaaacagaccgcaaagatcttgttttgtactgtgaagccttt
ttgactacgtatagaacttttataaccccagaggacctcattaagaagctacactacaga
tatactacattctgccacagtccggacatcttcaaaaagcgagtcagcaagaacacgttc
tttgttctggttcgcgtcgtggacgagctgtgcctggtggagctgacggaggacatcttg
aaacagctcatggacctcgtgttcacgctggtgtgcaacggcgagctcagcctcgctcgt
gtgctccgcaagaacatcctggacaaggtggagcagaagaagctgctgcgctacactaac
tcgctgaagcccctcgctgcccggggggtctctgcaagacctggaactctccatgacttc
cgaagtcacgaggttgccgatcagctcactcttcttgacgctgaacttttctacaaaatt
gagattcccgaggttctgctttgggcgaaggagcagaatgaggagaagagtccaaacctg
actcagttcacagagcactttaacaacatgagctattgggtccgctctttgataattcag
caggaaaaagcccaagatagggagaagttgcttctcaagttcattaagataatgaagcac
ttaagaaagttgaataattttaattcctacttggcaatactgtccgccctggactcagcc
cccatcaggaggttggagtggcagaaacagacctcagagggactggaggagtattgcacg
ctgatcgacagctcctcgtccttcagagcgtacagagctgctctggccgaggtggagccc
ccgtgcatcccatacttaggtctcattctacaggacctgaccttcgtgcacctggggaac
cctgacctcatcgacgggaaggtcaacttctccaagcgctggcagcagttcaacattctg
gacagcatgaggcgcttccagcaagtgcattacgagctgaagcgcaacgaggacatcatc
tctttcttcaacgacttcagcgaccacctcgccgaggaggccctgtgggagctgtcgcta
aagatcaagcccagaaacatctccaggcgcaagacggaccgcgaggagaagacttag
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integrated database retrieval system
