Kryptolebias marmoratus (mangrove rivulus): 108231041
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Entry
108231041 CDS
T05608
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108231041
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
108231041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Prok-E2_D
Motif
Other DBs
NCBI-GeneID:
108231041
NCBI-ProteinID:
XP_017263346
UniProt:
A0A3Q3BG82
LinkDB
All DBs
Position
LG14:complement(16430219..16524560)
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AA seq
2108 aa
AA seq
DB search
MTATANWVANGASLEDCHSNIFSLAELNGIKWRCYSFRGGGEYGPVISAPAQDDPVLRSF
MCCVQANLLCVWRRKIKPDAKELWIFWWGEEPNLSSVIHQELEVAEEGFWECGLSYECRT
LLFKAIHNLLERCLMDKGFVRIGKWFFKPHELEGKSLANSEHLSCSFSFFLHGESNVCTS
VEIAQHQPAYRITEHHIRLAQTSTTPVQVVLSPYGLSGTLTGQAYKMSDPAARKLMEDWS
YFYPMVLQQKEGGGEKDQKEAGQAFDCSSHVAVDVVVGGVRMTYPAAFVLIAQGDLPVEQ
PPPVSAAQGPNKELNNCSVPLTPPTSPEQPCSADSGFVTSTSNAPTPDSSMGITSISPKH
SGKKLTSQVVHQAWKECYLNQSEHIPNQQTDGTPTKEVPNGVTMWNFNDLGTRTSCSCSR
LKQQKLNMPTTSTANPQTCASSAQSSGLSLYPTSSLPKHKTSDKTEKADKQSKRPAVFPF
HHRLSATQETPLEQDPPGGPQLSSLVALEPPVEPLASLSNCKYSKPLTNSRKPPKSLLHS
PMSPLPPTLSPHPRIHDPEVLDVPVDMPVCPDGASGLGGITSETAVYTTLLRQRENGVGW
WRGFRTPSTNKTDFRPPELPTDKLEEMKTETSTDGVSFKRLYTQTHKRFKISEERVKEHI
HTLGLFEQPEVEALQKNGDDPYDFKEGDTEYPFPSSKRLKSSGREPSKKAKGEEITSNGS
LPDGKDAMSIFNSAPKSDDSGQDDATAKTNPSLTREKDLVVNISDLDNIFDEDEEELGTV
YPNQQPTKLLVPTEDRPVGKEGRVSVPYPSTVADLQMMFPTPPSLEQHPAFSPITPYRDT
PSQEPPAPSGVSDHLPSLASSHLTDNRMEMEEGAVSPRQDDIKPQMGSSMFAPLSCLPSQ
NLPPLKIPDQCYYRPSWALLPKMEHFTTIMHPQNAAFTKDGYTNVPSVNTLTDQDYGQMS
AATASVSTTTGILPSPATPRFSVPTPRTPRTPRGINTASSGQGSVKQDGTELSSPVSTPS
TSLPLSSVEPLARPGPTLPEAHSLYLILLLSDSVLSVFKDRNFDSCCICACNMNVKGADV
GVYIPDSTCEDQYRCMCGFSAIVNRRLAHGTGLFLEDELDIFGRTSEVGRAAERRLALCR
RDPTVGESRTKQLQDAVPASSSVMIVLREQCSQPISSLASLHLPLNSSCHGRKGALLQSW
MSEKQWADGSDACVDCYNALEQGLQYVDNPTGGKVDLAVVRSSALHSWPHTNVVDMSRLS
SQDMVRMLLSLQPFLQDAIQKKRTGRTWDNIQHVQGPLTWQQFHKMAGRGSYGSEESPEP
LPIPTVLLGYDRERDFLALSPLALPFWEKLLLEPYGGQRDVAYVVVCPNSTSLLAAACAF
FQELSAVYETCRLGKHRPLSKVSKDGFVCVGEEVEPQKLEELDVDHWMAGPWAGQQHTDN
ISKLKLYAYAFKQQLGPQLSTLTLDGSLLLPPKVQPPLNNTSSSGQPQAQADGEQTSGTA
NASTPCGATSGQTGEATQGGSTDSKGPQISTPLASTPAENTELSSEQSRIRIPTVADSVD
SLANPPAIVIYIVDAFITSCGQRNERGEDEEGVEVESNSVWLLGLLRCYTEMLQNLPETM
RPALVLQVVPCQYLLQPASGENHLYLQHLRSLAFSCYSQCRRLLPQQTHIKSLTGFGPVS
TVTSVFKSPEYPSPIQLYSPPFILGPTHPKQPEPGEIWAEPLPKYNVLFVGYCLSHDQRW
ILVSCTDQQGELLETCIINIDVPNRARRPKVSARKMGLQKLWEWCIGIIQMTSLPWRIVI
GRLGRLGHGELKDWTSLLGEHSLHSIGRQLREACRLCGISAADSPTILSACLVAMEPQGS
FVVMPDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQLAPSSYPTEDNN
DDMFDLPFPDELENDIGHDMMLINLHPSPNTSPVPSPGSPSGMGMGSHFHHTRGQGERLL
SRDNPPEELKQQPLALGYYVSTAQANGLPHWFWASCPQAENQCPLFLKASLHHHISIAQS
DEITSDKNKRSPHPLDSKTTSDVLRFVLEQYNALSWLTCTPATQDRQSCLPVHLAVLIQM
YNAILNML
NT seq
6327 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaacggcgaattgggtggctaacggggcaagccttgaggactgccactccaac
atcttctctctggcggagttgaacggcattaaatggcgttgctacagcttccgcggcggt
ggggagtacggcccggtgatctcagccccggctcaagatgacccggtcctgcgcagcttc
atgtgctgcgtgcaggccaacctactgtgcgtgtggcggcgcaaaatcaagcctgatgcc
aaggagttgtggatcttctggtggggcgaggagcccaatctctccagtgtcattcatcaa
gaactggaagtggctgaggaggggttttgggagtgtggactgtcctacgagtgcaggacc
cttctgttcaaggccattcacaacctgctggaaagatgtttgatggataaggggttcgtg
agaatcgggaagtggttcttcaagccacatgagctggaaggaaagtcgttagcgaacagt
gagcatctatcatgttccttctcctttttcctccacggggagagcaacgtgtgcacgagc
gttgagatcgcccagcaccagcctgcataccgcatcacagagcaccacatccgactcgca
cagacctccaccacaccggtgcaggtggttctgagtccgtacggtctgagtggcaccctg
acgggccaggcctacaagatgagtgaccctgcagctcgaaagctgatggaggactggagc
tacttctatcccatggtgcttcagcaaaaggagggaggtggtgagaaggaccaaaaggaa
gcgggtcaggcctttgattgcagctctcatgtggcagtggacgttgtcgtaggtggagta
aggatgacctatccagctgcttttgtgctgattgcccagggggacctaccagtggagcag
cctccacctgtttctgcagctcagggccccaacaaggagctgaacaactgcagtgtgccg
ctgactccgccaacgtcaccagaacagccctgctctgcggacagtggctttgtgacctcg
acctccaatgccccaacaccggacagcagcatggggatcaccagcatcagcccaaagcat
tctgggaagaagctgacctcccaggtggttcatcaggcttggaaggagtgctatctaaac
cagtctgagcacataccaaatcagcaaactgatgggacaccaactaaggaagtgccaaat
ggtgttaccatgtggaactttaatgatcttgggactagaacgtcctgcagctgctccagg
ttaaagcagcagaagctcaacatgcctacgacgtccactgccaaccctcagacttgtgcc
agctctgcacagtcttctggcttgtcgttataccctacctcctccctgcccaaacacaag
acaagtgacaaaacagaaaaggctgacaagcagtccaagaggccggctgtgtttcccttt
caccatcgtttatctgccacacaggaaacccccttggagcaggacccccctggcggtccc
cagctcagcagccttgttgcacttgagccaccagtggagcctctggcttctctgtcaaac
tgcaagtattccaagcccctcaccaacagcagaaaaccccctaagtctcttcttcattca
cccatgtctccacttccacccacgctcagcccgcaccctcggatacacgacccagaggtt
ctagatgtccctgtggatatgcctgtgtgtccagatggggcttcagggctgggggggatt
accagtgagactgctgtgtatacaacactgctgaggcagagggagaatggggttggctgg
tggagaggtttcaggacacccagtactaataagactgacttcagacctcctgaactccca
actgataaactagaagagatgaagacagagacaagcacggacggagtttcgtttaagaga
ctttacactcagacccacaagagatttaaaatctcagaagagagagtaaaggaacacatc
cacactttaggattgtttgagcagccagaggtagaggcgctacaaaaaaacggggatgat
ccgtacgacttcaaagaaggagacactgagtacccatttccatcttccaagaggttaaag
agttctgggcgagaacccagcaagaaagccaagggagaagaaatcacaagcaatggttca
ctgcctgatggaaaagatgcaatgtccatttttaactcagctcctaaatcagatgactca
ggtcaggatgatgccactgccaaaactaacccttctctgaccagagagaaagatctggtt
gtcaatatctctgatctagacaacatatttgatgaagatgaagaagagttgggcactgtt
tacccaaaccaacagccgaccaaactactggtgccaacagaagatcgtcctgttgggaaa
gaaggaagagttagtgtaccttatccatcaacagtagcagatctccagatgatgttcccc
acccctccttctctggagcagcatccagctttctctcccatcacgccatatcgtgacacc
ccgagtcaagagccccctgcacccagtggggtctctgaccacctgccatcactggcctcc
agccatctcactgacaacaggatggagatggaggagggtgcggttagtcccaggcaggat
gacatcaagcctcagatgggctcctccatgtttgctccactatcctgtcttcccagccag
aacctaccaccactcaaaattccagatcagtgttactatcgtccatcctgggccctcctg
cccaaaatggagcatttcacgacaatcatgcatccacagaacgctgcttttaccaaggat
ggatacacgaatgttcccagcgtcaataccctcacagaccaggactacggccagatgagt
gcagccactgcctctgtgagcaccactactggcatcttgccgtctcctgccacaccacga
ttttctgtgcccaccccacgaactccacgcacacccagggggattaatactgcaagttca
gggcagggctcagtgaagcaggatggtactgagctcagctcaccggtctccaccccgtcc
accagcctgcctctgagctccgtggagccattagctcggcctggaccaactctgcctgag
gctcacagcctgtaccttatccttctgctgtcagactcagtcctcagtgtttttaaggat
cgtaactttgatagttgctgcatctgtgcgtgcaacatgaacgtcaaaggagcagatgtg
ggggtgtatatcccagattccacttgtgaggatcagtaccgctgtatgtgtggcttcagt
gccattgtgaacagacggctggctcatggcacaggtctctttctggaggacgagctagat
atatttggtcgaacttctgaagttggccgagcagctgagaggaggcttgctctgtgccgc
cgggacccaaccgtgggagaatctaggaccaaacagttgcaggacgcagtcccagcctcc
tcgtctgtaatgattgtcttacgggaacaatgttctcagcctatttcctccctggcttca
cttcatcttccgctaaattcttcctgtcatggccgcaagggggcgctccttcaaagttgg
atgtctgaaaagcagtgggcagacgggagtgatgcctgtgtggactgttacaatgctttg
gagcaggggttacagtatgtggataatcccacgggaggaaaagttgatctagctgttgtc
agaagtagtgctcttcattcttggcctcacactaatgtggtagacatgagcaggttgtcg
tcacaggatatggttcggatgctgctgtctttgcagcctttcctgcaggatgctatccag
aaaaagaggacaggacggacttgggacaacatccagcatgttcagggtccacttacctgg
cagcagtttcacaagatggccggacgaggttcctatggttcggaggagtcaccggaacca
ctccccattccaacagtgttactaggctatgaccgggagcgggactttttggcgttgtcc
cctttggcgttacctttctgggagaaattactgcttgaaccctatggagggcagagggat
gtagcttatgtagtggtgtgtcctaatagcacctccctgcttgcggcagcctgtgccttt
ttccaggagctcagcgctgtttatgagacatgccgtcttgggaagcaccgtccactgtct
aaggtgtccaaggacggctttgtgtgtgttggggaggaagtggagccacaaaaactggag
gagctggatgtggatcattggatggcaggaccatgggctggacagcagcacactgacaac
attagcaaacttaaactctatgcttatgccttcaagcaacagctaggccctcagctctca
actctgactttggatggcagtcttttgttgcctcccaaggtccagcctcctttgaacaac
acatcctcttctgggcaacctcaagctcaagctgatggagaacaaacttcaggcacagca
aatgcttcaaccccatgtggagccacctcaggccagactggggaggcaacgcaaggggga
tccacagattcaaaagggcctcagatttccacaccactagccagcacaccagcagaaaac
actgaactctcatcggagcagtcaagaatcagaatccccactgtggctgactcagtggac
agccttgcaaacccaccagcaattgttatttacattgtggatgcttttatcacctcatgt
gggcaaagaaatgaaaggggtgaggatgaagagggtgtagaggtagagtcaaatagcgtt
tggctacttgggctgcttcgctgctacacagagatgctgcaaaatttgcctgagacaatg
aggcctgcactggtgctacaggtggtgccatgccagtatcttctccaaccagccagcgga
gaaaaccatttatatctgcaacacctgcgctccttggccttctcttgttattcccagtgt
agacggctgctcccccagcaaacacacatcaagtctctcaccggctttggtccagtatcc
actgtcacttcagtatttaagagtccagagtatcccagccccatacagctgtattccccg
ccatttatccttggcccgacccatcccaagcagccagagccaggagagatatgggctgag
ccccttcccaaatacaacgtgctttttgtgggatactgcttgtcacatgaccagcgctgg
atcctggtgtcctgcactgaccaacagggggagctcctggagacctgcatcatcaacatc
gacgtgcctaacagagccaggcgccccaaggtatcagctcggaagatgggactgcagaaa
ctgtgggagtggtgcatcggcatcattcaaatgacctcactaccgtggaggattgtcatt
ggtcggttaggaaggctgggtcacggggagctaaaagactggacctctctccttggcgag
cactccctccattcaataggacgccagctgagggaggcgtgccgtttgtgtgggatctca
gctgctgactctcccaccatcctcagtgcctgtctggtagccatggagccgcagggctcc
tttgtggtcatgccagatgcagtgaccatgggctctgtgtttggacgcagcactgctttg
aacctgcagacgtcgcagctgaacacacctcaggatgcttcctgtacacacatcttagtc
ttcccaacctcggctacgacccagctggcacccagctcctaccccacagaggacaacaat
gatgatatgtttgatctccccttccctgacgaactggagaatgatattggccatgacatg
atgctgatcaaccttcacccttcccctaacacttctcctgtgccctcgcctggatcgccg
tctgggatgggaatggggtcccatttccaccacaccaggggccagggagaacgcttgctg
tccagggacaatcccccggaggagctgaagcaacagccgctggctctgggctactacgtc
tcgacagcccaagcaaacggacttcctcactggttctgggcctcctgcccacaagccgag
aaccagtgcccactcttcctcaaggcttcgctccatcatcacatctccatagcacagtcg
gatgagatcacgtctgataagaataaaaggagccctcaccccttagactcaaaaaccacc
tccgatgtgctaaggtttgtattggagcagtacaacgccctctcttggctgacgtgtacg
cccgctacacaggatcgccagtcctgcctgcctgtccacttggcggtgctgatccagatg
tacaacgccatcctgaacatgctttag
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