Kryptolebias marmoratus (mangrove rivulus): 108231138
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Entry
108231138 CDS
T05608
Symbol
npas4a
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108231138 (npas4a)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108231138 (npas4a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
Motif
Other DBs
NCBI-GeneID:
108231138
NCBI-ProteinID:
XP_017263511
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All DBs
Position
LG9:20319445..20324751
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AA seq
925 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKDLLPISDADKARLSYLHIMSLACMYTRKSVFFTQEA
GTAASLEERFLSFHELSELMQALPGFLMLLTGEGKLLYLSDSVSEHLGHSMVDLVAQGDS
VYDIIDAADHFIMRNNLSTTTSLEMDRLFRCRFNTSKSVRRQSAGNKLVLIRARCLSAPP
ATTTAGSYWTSNPVWVCFCSPLEPQPSRSSSGAERESTSTPPLTEANLFLAFFHSQHDRD
MRLQAAQDSVSAYLGFDVAALRARSWYSLLHPQDLSHASAQHRSLLREGGEGRAEMVVRV
QAQDLSWVWLYMVLQLQSGDIPIRSNNYIISDSEAWSVRQQLSSEHTQLTLVLSGGSSQQ
ESLSLQSPETLSSPDQVFTPGSSGLSAQSFDFSTAGCSVGSSDEPGSSVTEAMQVEGDPR
SSISSLEEESFFQQHPAETPSAASSPTPVTVETVADLDFLTQNILLPPSFQLDPPVPALP
LPLPPVPTSQAQQTKEFVCTPPYTPQVGGVSFQFGEPLFSFDPTGTTTPPPSATTATATT
SLAASASSTAPPTTASSPTPPTTLSAKLPLALPSLSTDLLFSVEPCTSSLYEKLPPTPDS
DGDGDCTVMTLPEVRGPLYVDVPLGPLQCPPEGLLTPEASPGKQPCLSFFSLEREKERAE
ISLLAQHISSLAEGFYLDPLLSKLSPTSSPPSPFLSPAAEPADSVHMLREFYPIKMWRGL
DIPIFLDDDESLFEESILETLLQDDFAPLQNPGLSSPSPSTSPVPDASSPTSPQPPVCWR
QPSQFEGVGHICSVQSAHRNSMAGCGATVAAEAGVVVEGEGLGEEAMEIEMSSSPMSSCS
SIPASPPLILTASLSPATSTPVASPTPAVSCTQSLLEELAVLEPMFGAGASIAPGLGQQP
ELYQLQCHPSPQCFHKDGSGSVPPF
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctcgaccaaaggagcgtccaaggctcgacgggaccagatcaacgccgagatc
cggaacctgaaggacttgttgcccatatccgacgcagataaagcgcggctctcatacctg
cacatcatgtcactcgcctgcatgtacaccaggaaatccgtcttcttcactcaagaagcg
ggaactgctgctagccttgaggagaggtttctgtccttccacgagctgtcggagctgatg
caagcgctgccgggcttcctgatgctgctcaccggggaggggaagctcctgtacctgtca
gacagcgtctctgagcacctcggacactccatggtggatctcgtggcacaaggcgacagt
gtttatgatataatcgacgctgcagatcactttatcatgaggaacaatctgtcaaccacc
acatcacttgagatggaccgtctcttccgctgccgcttcaacacctccaagtccgtgcgc
aggcagagcgctgggaacaaactggttctgatccgagcccgctgcctctccgcccctcca
gccactaccactgccggctcctactggacctccaacccggtgtgggtgtgcttctgctcg
cctctggagccccagccgagccgctccagctccggggccgagagggagtcgacctccacc
cctcccctgaccgaggccaacctgttcctggcctttttccactcccagcacgaccgcgac
atgaggctgcaggccgcacaggacagtgtgagcgcctatctggggtttgatgtggcagct
ttgcgcgctcgctcgtggtacagcctcctccacccacaggatctgtcacatgcctctgct
cagcaccgtagccttttgagggaaggaggagagggcagagctgagatggtggttcgtgtg
caggcccaggatctgtcctgggtttggctctacatggtgcttcaactgcagtctggagac
atccccatcaggagcaacaactacattatcagtgactctgaggcctggtcggtacgtcag
cagctcagctcagagcacacccagctgaccctggttctgagtggtggctcctctcagcag
gagagcctgagtctgcagtctccagagaccctctccagtccagaccaggtgttcaccccc
ggcagcagcggcctgtccgcccagtcctttgacttcagcactgctggctgcagcgtgggc
tcctccgatgaacctgggagctcagtcactgaggctatgcaggtggagggtgaccctcgc
tccagcatctcctctctggaggaggaaagcttctttcagcagcaccctgcagagactccc
tctgctgcctcctcccccactccggtcactgttgaaacagtagcagatctagacttttta
acccagaacattctcctgccgccctccttccagctcgaccctcctgtgccagctctcccc
ctgcctctcccccctgtgcccacctcacaagctcagcagaccaaagagtttgtgtgcact
cccccttacactccccaggtcggtggggtcagcttccagttcggcgaacccctcttcagc
tttgacccaactggtacgaccacccctccaccctctgcaacaactgctactgccaccacc
tccctggccgcttcagcatcctccacagccccacccaccacagcctccagccccactcct
cccaccaccctgtctgcaaagctcccccttgcactgccttccctttccactgaccttctc
ttctctgtggagccctgcaccagctccctgtacgagaaactgccccccacgcctgacagt
gatggggacggggactgcacagtgatgaccctgcctgaggtacggggtccgctgtatgta
gatgtaccactgggaccccttcagtgtccccctgaaggcctcctcacccctgaggcttca
cccgggaaacaaccctgcctctccttcttctctctcgagcgggaaaaggagagggcagaa
atatccctccttgctcagcacatcagctccctggcagaggggttctacctggatccgctc
ctgtccaaactctcccccacctcctcccctccctcccccttcctgtccccagctgcagaa
cctgctgattcagtccacatgctgagggagttctatcccatcaaaatgtggagaggtctg
gacatccccatcttccttgatgacgatgaatctctgtttgaagagagcatcctagaaacc
cttctgcaagatgacttcgctcctctccagaaccctggactctcctccccctccccttcg
acctcccctgtgcccgatgcctccagcccgacctctcctcaacccccagtgtgctggcgc
caaccctcccagtttgagggagtgggccacatctgtagcgtccaatcggcgcaccgtaac
tccatggccgggtgcggggcgactgtggcagctgaggccggggtggtggtggaaggggag
gggctaggagaggaagcgatggagatcgagatgtcgtcatctcccatgtcctcctgctcc
tccatcccagcttcccctcccctcatcctcactgcctcgctgagccccgccacctccacg
cccgtcgcctcgcccacgcccgccgtgtcttgcactcagtccctcctggaggaactggcc
gtcctggaacccatgtttggggcaggtgcctcgatcgcccctggcttagggcaacaacct
gagttgtatcaactccaatgtcatccatcgccacagtgcttccacaaagatgggagtgga
agtgttcctccgttctaa
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