Kryptolebias marmoratus (mangrove rivulus): 108231153
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Entry
108231153 CDS
T05608
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108231153 (sox3)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108231153 (sox3)
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108231153
NCBI-ProteinID:
XP_017263532
UniProt:
W6DHD6
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All DBs
Position
LG9:20768703..20770570
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AA seq
300 aa
AA seq
DB search
MYNMMETELKTPLPQSNSGSAPGAKNNSASDQERVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGTNTVNNSVSVGQRMDGYAHMNGWTNSAYSLMQDQLAYPQHHGMNSPQIQQM
HRYEMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQSPSAMGLSSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDSAEHSSLQSSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagctgaagaccccgctcccgcagtccaactcgggctcg
gcgccgggcgcgaagaacaacagtgccagcgaccaggagcgggtaaagcggccgatgaac
gccttcatggtctggtcccggggccagcggaggaagatggcacaagagaaccccaaaatg
cacaactctgaaatcagcaagcggctcggcgctgactggaaacttctgactgacgccgag
aagaggccgttcatcgacgaggccaagcgtctgcgcgcgatgcacatgaaggagcatccg
gattataaataccggccccgcaggaagaccaagaccttgctcaagaaagacaagtattct
ttgcccggggggctgctggcgccaggaaccaataccgtcaacaactcggtgtcggtgggg
cagcgcatggacggttacgcgcacatgaacggctggacgaacagcgcgtactcgctcatg
caggaccagctggcctaccctcagcatcacggcatgaacagcccgcagatccagcagatg
caccggtacgagatggcgggcctgcagtacccgatgatgtcctcggcgcagacctacatg
aacgcggcgtccacctacagcatgtccccggcgtacacgcagcagagccccagcgccatg
ggcctgagctccatggcgtccgtgtgcaagaccgagcccagctcaccgccgccggccatc
acgtcccactctcagagggcgtgcttgggggacctgagggatatgatcagcatgtatctg
ccccccggcggggacagcgcggagcactcctccctgcagagcagccggttacacagcgtc
catccgcactatcagagcgcagggactggcgtcaacgggacgctacctctcactcacatc
tga
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