Kryptolebias marmoratus (mangrove rivulus): 108231334
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Entry
108231334 CDS
T05608
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108231334
04121 Ubiquitin system [BR:
kmr04121
]
108231334
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
108231334
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
108231334
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
hAT-like_RNase-H
DBD_Tnp_Hermes
TetR_C_22
zf-C2H2_12
Flavodoxin_NdrI
Motif
Other DBs
NCBI-GeneID:
108231334
NCBI-ProteinID:
XP_017263817
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Position
LG9:21837631..21840339
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AA seq
623 aa
AA seq
DB search
MASSCRKLTPSTFKSDVWAHFAFLSKSGTQEVDKSKVVCKLCQRELKYCSNTTNLRNHLT
RYHADALQKAQPVDSKQTQIDKSFISKLPSSSARAQKITKSVAVFICKDLRPYSVVENKG
FKNMLKILEPRYAIPTRKYMTEVAVPSLYTEVKTDVLESLKSAERVALTCDGWTSRATDP
YVTITSHFISDEWELVSNVLQTRPLHGSHTGSNIANLLTEAINEWGITGKVPAVVTDNAA
NMLAAVGLTDLLHVGCFAHVLNLASQAALKTPAVTRLLGRVRRISAFFHRSTLACHALKK
NQKLLDLPQHKLLTDVSTRWNSALDMLERFLEQQPAVSAALLAPEVRKQEKDLCSLTEAD
ITAAEDIAQALKSLKKATLVMSQESTPSLSVIAPLKERLLEDMQPSSSDSAVVKEMKIAM
CRDLQKRYLGLKDELSIAAALDPRFKALLFLSDDDEREEVFTHLIALTKELATVKSSQQS
GLMDEDREAIEQQGEPVDDPSGPSPKKARDSCALADLFGSAYTTPVAVSRTTDTKALDEV
VRYKEVQPLPLSTNPLNWWREHEGEYPLLSCQAKRYLCIPGSSVPAERIFSTAGDIVTAQ
RSALKPEHVDQLLFLNKNLHVPT
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagctgtagaaagctaactccgtcaacttttaagtcagatgtttgggctcat
tttgctttcctgtctaaatctggaactcaagaagtcgacaaaagcaaggtggtatgtaag
ctgtgccagagagaattaaagtactgcagtaacacgacaaacctgcgcaatcacttaacc
agataccacgcagatgcgctacaaaaagcacaacctgttgactccaaacagacacaaatc
gacaaatcattcatctctaaactgccgtcaagctctgcccgcgcacaaaaaatcacaaag
tctgtagccgtgtttatttgcaaggacctacgaccgtacagtgttgttgaaaacaagggt
tttaagaatatgctaaagatactcgaaccacgctacgcaataccaacacgtaaatacatg
acagaagtcgctgtgccgtcactgtatacagaggtgaagacagacgttttggagtcgtta
aagtcggccgaaagagttgctctgacgtgtgatggctggacctcgagagctaccgacccc
tacgtaaccatcacttctcatttcatatcggacgagtgggaattggtgtcaaatgtgctt
cagaccaggccccttcatggaagtcatacaggtagcaatatagcaaacttgttgacagag
gcaataaatgaatggggcataaccggaaaagtgcctgctgttgttacagacaacgcggct
aacatgctagctgctgtcggtctcactgatctattgcatgttggctgctttgcccatgtg
ctcaacttggcttcgcaggctgctcttaaaacccctgcagtcacacggcttctgggcaga
gtgaggcgcatctctgctttttttcatcgcagcactttggcctgtcatgcactcaagaag
aatcaaaagttgttggacctcccacaacacaagttactgactgatgtctctacaagatgg
aatagcgctttagatatgctggagagatttttggaacaacaaccagctgtctctgctgca
ttacttgcacctgaagtgcgaaagcaggaaaaagatctatgctcccttacagaggcagac
attacagcagcagaggatattgctcaggctctgaagtcattaaagaaagccaccttggtg
atgtctcaggaaagcaccccaagtctgtctgtcattgcacctctaaaagaaagacttcta
gaggatatgcaaccatcatccagtgactctgcagtggtgaaggaaatgaagattgctatg
tgcagggatctccaaaaaaggtacctgggtctgaaggatgagctctccattgctgctgcc
ctggacccaaggtttaaggccctactttttctgtcagatgatgatgagcgagaagaagtg
ttcacgcatcttatagctctcacaaaagaattggccactgttaaaagctcacaacagagt
gggctgatggatgaagaccgtgaggcaattgaacagcagggagagccggttgatgaccct
tctggaccatcaccaaagaaagcaagggactcttgtgctctggctgatctttttggaagc
gcatatacaactccagtagcagtgtccagaaccacagataccaaggcattggatgaggtg
gtgcgttacaaagaggtgcaaccactgccactctccacaaatccactcaactggtggaga
gagcatgagggggaataccctttgttgtcatgccaagctaaaaggtacctttgcatccca
ggcagtagtgtacctgctgaaaggatcttttccacagcaggtgacatagtcacagcccag
agaagtgcattgaagcctgagcatgtggatcagctgctttttctgaacaagaatctccac
gtgcccacttag
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