Kryptolebias marmoratus (mangrove rivulus): 108231361
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Entry
108231361 CDS
T05608
Symbol
pbrm1l
Name
(RefSeq) polybromo 1, like
KO
K11757
protein polybromo-1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108231361 (pbrm1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108231361 (pbrm1l)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108231361 (pbrm1l)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108231361 (pbrm1l)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
108231361 (pbrm1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
PBP_sp32
Motif
Other DBs
NCBI-GeneID:
108231361
NCBI-ProteinID:
XP_017263872
LinkDB
All DBs
Position
LG4:complement(12016432..12028640)
Genome browser
AA seq
1626 aa
AA seq
DB search
MSAKRRRATSPCSSVSGGGDHDDNSSSTPGSGRKRRKISNVPPVDTIAVCHELFNAVKDY
KDHHGRQLSEVFLRVPKRRNQPDYYGVISQPIDMTKIQYKLKSEEYNDVEQLTADFQLMF
NNARSFYKSDSEEYQAACKLWGVYLQTRNEFVQPGEGDDEDEEGDDVMDNPGAEFETSAS
SLKEVLEQLLEAIVSHADPSGRPVSELFQKLPSKVHYPDYYAIIKEPIDLRTIAQRIQTG
YYKTVNAMAKDVDLMAKNAKTYNEPGSQVFKDANTIKKVFIQRKTELEHAEPTKTSLRIR
NRRSGQGDRFAGVAPQYGSESEDDPVLSGSVCYDEGESEAESQSSSIEMSNPVFQLYKAV
RGARNNQGQVFSEPFQQLPSRREYPDYYQQIKTPISLQQIRAKMKNGEYESVEQIEADLT
LMFENAKRYNMPNSSIYKRAFRLQQIMQAKKRELVRRDEEDGDSILSSDAGSVKRKSHKK
NVKKNRMKALYAAVIEAREMGTSRRLCDLFTVKPSKKDYPDYYNVILEPMDLKTIEHKIR
NERYSTEEELIEDMKLMFRNARHYNEEGSQVYNDADVLEKILKEKRKELGPPPEEEDVGS
PKLKLRKSGVSPKKSKYLTPLQQKLNELYDAVRNFTDSRGRRLSTIFLRLPSRAELPDYY
ATIKKPIDMERIRSHMAAGRYQDVEALFEDFALMFNNACIYNEPESLIYRDALVLHRVLL
ETRKQQERGEDSGPPAVGSLVRELIRNLFVSVMGHQDEEGRCYSDSLAELPAVDLAAPEK
PPLNFDIIRINVERGRYRRLDVFQEHVFEVLEKARRLHRTDSEAFEDAVELQQFFIRIRD
ELCKNGEILLSSALSFSGKHLHNDVEQEKREKIPREIEEDRQKAAEEEQNKEGRKEEDLP
KEDWQSDSESQRVYSQDCSFENRTYHVGEFVYVEPSEPNLKPHIVCIERLWEDEAGEKWL
HGCWFYRPSETFHLATRKFLEKEVFKSDYYNKAPFSKVLGKCVVIFVKDYFKMQPEGFKA
EDVYVCESRYAARNKSFKKIKIWAVPESSVKLVPREVPLPVVRVASMFAKPDLEKLTVSY
VDSGSFVDKEREDVPMEMSGSEPGCQHYEQLRFNNMWFKVGDCVYIRSHRLSKPRVARIE
KLWVQNGTTFFFGPIFIHPEETEHEPTKMFYKREVFLSHLEETLPLTCVIGKCAVSCFKD
YLSCRPTEYSEEDVLLCESRYQEAEKQMKKFKGLKRFSYSSKVLEDEVFYFRKLIVPQKE
ASPFLNKKIDELEVKLADLEDADDDMEELDEDEDGPSTPSLPQMQTSLSSDMDMMPYTPS
QATPKIKGLAKKEGAKRKINMSGYILFSSEMRAVIKARHPDFSFGELSRLVGTEWRNLEA
TKKAEYEERAAKIVEQQERDRPFFKHGSPRAGTPVGALMGVVPSPSSMGMINQTMTPVSG
MMGAYGPPYMPMQGPHEGLLSVAPMPPHLPPHHLQQGMPGYPGMPHQGMNGMAGSPGQGN
FIQQPGMFSPGQHAPPPYPGQGQPSHLQPTTPMFVAPPPKTQRVLHSEAYLKYIEGLNSE
SNTVSKWDQTLKAQRRDAHLTKEQESRLPAHWLKSKGAHTTMVDALWRLRDLMLRDSLNI
CQAYNP
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaagcgacgacgagccacttctccctgcagcagcgtcagtggagggggagac
cacgacgataactcttcctccactcctggaagtggaagaaagagaagaaaaatttccaat
gtccctcctgtggatacgatcgctgtttgccatgagctgtttaatgctgtcaaagactac
aaggatcatcacggaaggcaacttagtgaagttttccttcgggtgccaaagaggaggaac
cagcccgattattacggcgtgatctcccagccgattgatatgacgaagattcagtacaaa
ctgaagtcagaagagtataacgatgtggagcagctcactgcagatttccagctcatgttt
aataacgcccggtcattctacaagagtgacagtgaagagtatcaggcagcatgtaagctg
tggggagtgtatttgcaaacaaggaacgagtttgtgcagcctggagaaggggacgatgaa
gatgaagaaggtgatgatgtgatggataatcctggagctgaatttgagacatctgctagc
agtttgaaagaagtgctggagcaactcttggaggctatagtgtcacacgccgatccctca
gggcgaccagtcagcgaactcttccaaaaactgccttctaaagtgcattacccagactac
tatgccattataaaggagccaatagatctgagaacaatcgctcagcggatacagactgga
tactataaaactgttaatgctatggccaaggacgttgacctgatggccaaaaatgccaaa
acatacaatgaaccaggatctcaggtttttaaggatgctaacaccataaagaaagtgttc
atccaacgcaaaactgaactcgagcacgccgagcctactaaaactagccttcgcatcaga
aatcgcagatctgggcagggcgatcggtttgctggcgttgctcctcagtacggctcagag
agcgaggatgacccagtcctttcaggatctgtgtgctatgacgagggcgagtccgaggct
gagagccagagttcgagcatagagatgagcaaccccgtcttccagctttacaaagctgta
aggggagccaggaacaaccagggacaagttttctctgagccctttcagcaactgccgtcc
cgcagagagtatcccgattattatcagcagatcaaaacgccgatttctctgcagcagatc
agggcaaagatgaagaatggcgagtacgaaagcgtggaacagatcgaggcagacctcact
ctgatgtttgagaatgcaaagcggtacaacatgccgaactcaagcatttacaaacgggct
ttcaggcttcagcaaatcatgcaggcgaagaaaagggaacttgtgaggagagacgaagaa
gacggagacagcattttatcatctgatgcagggagcgtcaaaaggaaaagccataagaaa
aatgtcaaaaagaaccggatgaaagctctgtatgctgctgtgatcgaggccagggagatg
ggtaccagccggcgcctctgcgatctttttacggttaaaccatccaagaaggactaccct
gactactataacgttatcctcgaaccgatggacctgaaaaccatcgagcacaaaattcgg
aacgagcgctattccacggaggaagagctcatcgaagacatgaagttaatgttccgtaat
gcccggcattacaacgaggagggatctcaggtgtataatgacgcagacgttttggagaag
atactgaaagagaagcgtaaggagctgggacctccaccagaggaggaggacgtagggtca
cctaaattaaaattaagaaaaagtggcgtttctccaaagaagtccaaatacctcacccct
ctgcagcagaagttaaacgagctctacgacgccgtgcgaaacttcaccgacagccgaggt
cgccgtttgagcacgatctttctccgactgccttctcgtgccgagctgcctgactactac
gccacgatcaagaaacccatcgacatggagcgcattcgaagccacatggcggcgggccgc
taccaagacgtcgaagcgctgttcgaagacttcgctctcatgttcaacaacgcctgcatc
tacaacgagcccgagtccctgatctaccgagacgctctggtgctgcatcgagtgttgctg
gagacgcggaagcagcaggagcgcggggaggactccggccccccagctgttgggtctctg
gtgcgcgagctcatcaggaatctgtttgtgtccgtcatgggccaccaggacgaggagggt
cggtgctacagcgactcgctggcggagctccccgctgtggatctggctgccccggagaag
ccgccgctcaactttgatatcatcaggataaacgtggagcgcggtcgttacaggagactg
gacgtcttccaggagcacgtgttcgaagtgctggagaaggcgagaaggctgcacaggaca
gactcggaggcattcgaggatgccgtggagcttcagcagtttttcattaggatcagggac
gagctttgcaagaacggggagattttactctcctcggcgctcagcttctcggggaaacac
ctgcacaacgacgtagagcaggagaagagggagaagattcccagagagattgaggaggat
aggcaaaaagcagcagaggaggagcaaaacaaagaaggcaggaaagaagaggacttgcct
aaagaggattggcagtctgactcggagtcgcagcgtgtgtacagtcaggactgcagcttt
gaaaacaggacgtatcacgtgggggagtttgtctatgtggagccatcagaaccaaacctg
aagcctcatattgtctgtatcgaacgtttgtgggaagatgaagcaggtgagaaatggctc
cacggctgctggttctatcgacccagtgaaaccttccacctggccactcgcaaattcctg
gaaaaagaggtcttcaagagcgactactacaacaaagcgcccttcagcaaagtcctgggc
aaatgtgtggtcatttttgtgaaggattatttcaaaatgcagcccgagggctttaaagct
gaagatgtgtatgtgtgcgagtcgcgctacgctgccagaaataagtccttcaagaagatc
aagatctgggccgtgcctgagagctccgtgaagctcgtaccccgggaggtcccgcttcct
gtcgtccgtgtcgcttcgatgtttgccaaacccgacctggaaaaactgacagtgtcgtac
gtagacagtggcagttttgtggacaaggagagggaagatgtcccgatggagatgagcggc
tctgagcccggctgccagcactacgagcagctacgcttcaacaacatgtggtttaaagtg
ggggactgcgtttacatccgatcacacaggctgtccaaacctcgggttgccaggatagaa
aagctgtgggtacagaacggaaccaccttcttctttggacccatcttcattcatcccgag
gaaacggagcacgaaccaacaaagatgttctacaagagagaagtgttcctgagtcatctg
gaggagaccttgcccctgacttgtgtcataggcaaatgtgcagtgtcctgctttaaggac
tacctgtcatgcagaccaaccgagtattcagaggaggacgtcctgctgtgtgagagtcgc
taccaggaggcagagaaacaaatgaaaaagttcaagggcctgaaacgcttctcctattcc
tccaaagtgctggaggacgaggtgttttacttcaggaagttgattgtgccacaaaaggaa
gcttcaccctttttgaacaagaaaattgacgagcttgaggttaaactggcggacttggag
gacgcagatgatgacatggaagagctggatgaagacgaagacggtccatcgacgccttct
ttgcctcagatgcaaacctctctctcaagcgacatggatatgatgccttacacgccttcc
caagccactccaaagataaagggtttagcgaagaaggaaggagccaagaggaagatcaac
atgagcggatacatcctgttcagcagtgaaatgcgagcagtcatcaaagctcgccaccca
gatttttctttcggggagctgagtcgattagtaggcactgagtggagaaacctcgaggct
accaagaaagcagagtacgaagagcgggcagccaaaatagtggaacaacaagagcgtgat
aggccattcttcaagcatggctcccctcgagcaggtacccctgtaggggcgctgatgggg
gtggtgccttcgcctagcagtatgggaatgataaaccagaccatgacacctgtgtcaggc
atgatgggagcttacggcccaccttacatgcccatgcagggcccccatgagggtttgctg
agtgtggcgccaatgccacctcacctgcctcctcaccatctccagcaaggtatgcctgga
taccctggcatgcctcatcagggtatgaacggcatggcaggaagtccaggacagggaaat
tttatacaacagcctgggatgttcagcccaggacagcatgcccctccaccatatccagga
cagggccagccatctcacttgcagcccaccacccccatgttcgtggcaccacctccaaag
acacagagagtgctccactcagaggcctacctgaagtacatcgaaggattaaattcagag
tctaacactgtcagcaaatgggaccaaacgctcaaagctcaaagacgagacgctcacttg
accaaagagcaggagagtcggcttccagcacactggctgaagagcaaaggagctcacacc
accatggtggacgccctgtggcgtttgcgcgacttgatgctgagagactctctgaatatt
tgtcaggcttacaacccgtga
DBGET
integrated database retrieval system
