| Entry |
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| Symbol |
rfc1
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| Name |
(RefSeq) replication factor C subunit 1
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| KO |
| K10754 | replication factor C subunit 1 |
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| Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:kmr00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108231386 (rfc1)
03410 Base excision repair
108231386 (rfc1)
03420 Nucleotide excision repair
108231386 (rfc1)
03430 Mismatch repair
108231386 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:kmr03032]
108231386 (rfc1)
03400 DNA repair and recombination proteins [BR:kmr03400]
108231386 (rfc1)
DNA replication proteins [BR:kmr03032]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108231386 (rfc1)
DNA repair and recombination proteins [BR:kmr03400]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108231386 (rfc1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG3:8814949..8824483
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| AA seq |
1180 aa
MDIRRFFGPVSGKPAVQKAAPSENLKSKDKKKKVSLSSDEDGKKKGSTKVKSSKTEEQHK
CGETKRRKRAVIESDSEEEEEEEPVMKSKKPSKEKGRTSKAGLPPKKDPVQYVSETDSDS
DNFLSLGKVSKLKQNGAAKTKKPGPESSHSGSKGPVKSPIAPSSSQPRAGPKSPPAPATP
KSAPPPPPKQTPTSVLDYFGTGTIHRSDKKLVASTKRKAPTQDSGDLISDEEMARQLQME
EEKELEKQVHNDEEFARTLAMLDAEPQTKKARKTSEDQPGPSTTPRKSSTAAAAVSGTSS
PPKARGRISVDGIGPSPRNSPIKSSSKLAMMKKKDEAKDQGPKTKTPTKNKISPKKEPPS
SSVSGMKFVPKTQTTPTAAKASPKKPETTSISPDDAEKKKMNSSAYRSYLNREGPRALGS
KEIPTGAENCLEGCVFVLTGVLESMERDDAKTLIERYGGKVTGNISKKTTYLVQGRDSGA
SKLEKAESLGTKILDEDGLLDLIRTKPGKKSKYEIAAEAEITASKSRTPPSHTSKSTPKA
QKISPSKGNSRSPHTPSPSKTGQARGHGSRAGDGSATPGRGSGRTARRELGLPSPSAPGP
SPPSPTGESLLWVDKYRPRSLKAVIGQQGEQSCANKLLRWLQSWNKHHSSSSSSSKPAAA
RFGKFGGKDDGSGYKAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVV
AESLNNTSIENFYKGMSQTVSSKHVMIMDEVDGMAGNEDRGGMQELIGLIKNTKIPIICM
CNDRNHPKIRSLANYCFDLRFQRPRVEQIKGAMMSVAYKEGIKIPPPALNEIILASNQDV
RQVIHNLSMWSAKNKVMTYDQCKSDAASARKDMKLGPFDVCRKVFASGEESAHMSLIDKS
DLFFHDYSLAPLFVQENYVHVRPSAAQGDVKSHLVLLSKTADSISDGDLVDRQIRSRQNW
SLLPTQAIFASVIPGELMRGYMAQFPVFPSWLGKNSSTNKHARIIQELASHMSLKTLSTR
QAVNLDYLHYLRLMLLHPLQKDGVEGAGRAVQLLDDYQLIREDVDSIMESSVWGGQPDPY
SKLDSKVKAAFTRAYNKEVHLTPYSLQAVKKGRRGGGDVELGGESMDLDGPGSEDEGEEL
QTDAMIKQKKTKTTKESKKEKKEDSGKGKGKGKGKGKAKK |
|---|
| NT seq |
3543 nt +upstreamnt +downstreamnt
atggacatcaggcggttctttggaccggtatcagggaagccggctgtgcagaaagcagcc
ccgagtgaaaacctcaaatcaaaggacaagaagaaaaaggtgtccctgtcctcagatgaa
gatgggaaaaagaaagggagcactaaggtgaaaagctccaaaacagaagagcaacacaag
tgtggtgagacgaagcgaaggaagcgtgctgtgatcgagtccgactcagaagaagaggaa
gaggaggagccagtgatgaagtcaaagaaaccctccaaagagaaaggaagaaccagcaaa
gcaggactgcctcctaaaaaggatcctgtgcagtatgtttctgaaacagactcggacagt
gacaacttcctgtccttggggaaagtttccaaactcaaacagaacggcgctgctaaaacc
aaaaaaccaggtccagaaagctctcactcagggagcaaaggtccggtgaaatctcccatc
gcgccctcctccagtcagcccagagccgggccgaagagtcctcctgcgcctgcaaccccc
aagtcggcaccgcctcctccgcccaaacaaacccccacctccgtgctcgactacttcggc
acagggacgattcaccgctccgacaagaagctggtggccagcaccaaacgaaaggctcca
actcaagactcgggcgacctgataagcgacgaagaaatggctcggcagctgcagatggag
gaggagaaggagctggaaaaacaggtccacaacgacgaggagtttgccaggactctggcc
atgctggacgcagagccacagaccaagaaggctcgcaaaacctctgaggatcaaccaggt
ccaagcacaacccccaggaagagcagcacagctgctgcggctgtcagcggcacgagcagc
cccccgaaggccagagggaggatttcagtggatgggattggtccatcgcccaggaacagc
cccatcaaaagcagctccaaactggccatgatgaagaagaaggacgaggcgaaggatcag
ggaccaaagactaaaacgcccactaaaaataagatttcccccaaaaaggagcctccttct
tcatcagtgtcaggcatgaagtttgtaccgaaaacacaaacgacaccaacagcagctaaa
gcctctcctaagaaacctgagacgacaagcatcagtcctgatgatgcagagaagaagaag
atgaactcttcggcttacaggagctacctcaacagagaaggaccacgagctctgggatcc
aaggagatcccgacgggagcagagaactgtttggagggctgcgtgtttgtgctgacggga
gtcctcgagtcgatggagagagacgacgccaaaactctgatcgagcgctacggcgggaaa
gtgacgggcaacatcagcaagaagaccacctacctggttcaggggcgagacagtggagcg
tcgaagctcgagaaggcggagagtttaggcaccaaaatcctcgatgaggacggtttgctg
gacctgatcagaaccaaaccgggaaaaaagtccaagtacgagatcgctgcagaggccgag
atcacagcttcaaagagcaggactccccccagccacacgtcaaagagcacccccaaagct
cagaagatctccccctccaagggtaactccaggtccccccacaccccgagcccgtccaag
accggacaggcgcggggccacggctccagggccggcgacggcagcgccacacccgggaga
ggctcgggtcgcacagctcggagggagctgggcctgccctccccctcggccccaggaccc
tctcccccgtcaccgacgggggagagtctcctttgggtggacaagtaccgtcctcggtct
ctgaaggctgtgatcggccagcagggggagcagagctgtgccaacaagctgctccgctgg
ctgcagagctggaacaaacatcacagcagcagcagcagcagcagcaagcctgcagctgcc
aggtttggtaaatttggaggcaaagatgacggatcaggatacaaagctgctctgctctct
ggacctccaggagtggggaagaccaccacagctgcactggtctgcgaggagctgggcttc
agctacgtggagatgaacgccagctgcactcgcagcaaaaacagcttgaaggaagtcgtc
gccgagtcgctgaacaacaccagcatcgagaacttctacaaaggtatgtctcagacggtg
agcagtaaacacgtcatgatcatggatgaggttgacggtatggctggtaatgaggaccga
ggaggaatgcaggaactaatcggactgataaaaaacacaaagattcccatcatctgcatg
tgtaacgatcgcaaccacccgaagatcagatcgttggccaactactgcttcgatctgcgc
ttccagaggccgcgggtggagcagatcaagggagccatgatgtctgttgcttacaaggag
ggaattaagatcccgcctccagccctcaatgaaataatcctggcctccaatcaggacgtc
cgacaggtgatccacaacctgagcatgtggtcagccaagaacaaggtgatgacgtatgac
cagtgcaagtcggacgccgccagtgcccgcaaagacatgaagctggggccgttcgacgtc
tgcaggaaggtgttcgcctcgggggaagaaagcgcccacatgagccttattgacaagtcg
gacctctttttccatgactactcgctggcgccgctgtttgtccaggagaactacgtgcac
gtccgtccgtccgcagcccagggagacgtgaagtcccacctggtgctgctcagcaagacg
gccgactccatcagcgacggcgacctggtggacagacagatccgctccagacaaaactgg
tcactgctgcccactcaggccatctttgccagcgtaataccaggggagctcatgaggggc
tacatggctcagttcccggtcttcccaagctggctcggcaagaactcgtccaccaacaaa
cacgcccggatcattcaggagctggcctctcacatgagtttgaagacactgagcaccaga
caggcggtgaacctggactacctgcactacctgcgactgatgctgctccacccgctacag
aaggacggggtggagggcgccggtcgggccgtgcagctgctggacgactaccagctcatc
agggaggacgtggacagcatcatggagagcagcgtctggggcggacagcctgatccttac
tccaaactggactccaaggtgaaggcagctttcacacgggcatacaacaaagaggtgcac
ctgacaccgtactccctgcaagctgtgaagaagggccgccgtggtggtggggacgtggag
ttgggaggagagagcatggacctagatggtcctgggtctgaggacgaaggggaggagctc
caaactgacgctatgatcaaacagaagaagaccaaaaccactaaagagtccaaaaaggag
aagaaggaagactctggaaaggggaagggaaaagggaaagggaaaggcaaggctaagaaa
tga |
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