Kryptolebias marmoratus (mangrove rivulus): 108231399
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Entry
108231399 CDS
T05608
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108231399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108231399
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108231399
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
HEAT_2
Motif
Other DBs
NCBI-GeneID:
108231399
NCBI-ProteinID:
XP_024859964
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Position
LG9:complement(23964330..23982153)
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AA seq
1226 aa
AA seq
DB search
MTSRSSVSNSLDELDYSSDPGSLYEAQMKPTKRRKQVVPGPQPPKRPRRNAAIRALSSPS
SSPVSSPPEPSPRHQSPSEGTSRLLSPRRPVRGASEGNQGISAKDIYDAVCSGKSAMVTV
VDEWLDSYKQSREAGLLVLINFIVQCCGCKGVVSREMLDGMQHAEIISTLTREFNEDSVN
YPLSTPGLQMKRFKASLCEFARVLLRSCRNSLIYDEYLFPSLLALLTGLSDSQVRAFRHT
STLLALKLMSGVVEVAVTVSVQLQTAQRRYDLENSKRPNNRASDKLEQLKATISELQENK
EELSSMMNATFRGVFVHRYRDRLPEIRAACIEELGLWLKTDPEDFLNDGCLKYLGWTLHD
KQSPVRLQCVRALQGLYQEKEFIGRLELFTSRFKERILSMVLDKDPDVAVEVVNLLLLIQ
QSAEEGLKEEECGHIYPLVYASHRGLASAAGAFLCNKLKCVMATDTQGKDQSRNAAFFQI
LISFYIQSEFHEHGTYLVDSLWAVAGSELRDWETMTALLLQDAGLLYEEEGALLEIMTCA
IRQAAQATPPVGRSLGKKILSMKDKKIQEQDRNRITTHFIPLLPQLLAKYSADAGKVSLL
LKTPFYFDLEMFSSTQWLEKHLDPLLSQICDIVKKHTEVSVLQACTLLVSTLCSDRYTFS
SRAHLAFSQLLDDLTECFNTYLSDLLKGSADEDDVYNATSALKRIAALSSGKDPTCWKLL
DSCLELLKSRMESLDYDTELMVAALKCAAFHLMWAKVNAVNFKPAEAELKRVKKEVRFFC
RICQSCLSLDQTEIRDQAFELLCDLLLLYSVTSVRTEPALQTLVHLPSDSLRAELASFLL
DYVFTDTEDVELSDEGDDLKMTLLQKKRNQLAGYCKLVIYGVLDLSAATNVFKHYSKCFK
DFGDIIKETVSKSKLISPIQSAKTVCLSLQQLFSEMLTDGQNQQDLSDIRDLAKKLAMSF
GIDLHRVRKPLVSLHLDGIRFAFRSVQDKEEELSNVTFLEILSEFSFKLLPQDRNQLAEL
VKSECPGAALSWPSVRLYQRSLGSRSSKFRELEEGDDAVSSLNTPVAKRKKPAPQGSVSS
TARGSWLETSSIHSHLLTPALTSTVQKQTAKEPAFKKPRDAPSDVGSTLTDLESEDEFSQ
GTQMRKVKPVKRVSSSQTAPTVEQEDLDSHLTLLSLIEDDVSEKDEGNKSGGEEPQIEEY
ESDSEIAYPLPSTRHTSASFLDELFD
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtagaagctcagtttcaaacagtcttgatgagttggattactcctcagaccct
ggaagtttgtatgaggctcagatgaaacccacaaagcggagaaagcaggtggtacctggg
cctcagccgcctaagagacctaggagaaatgctgcaataagagcgctgtccagccccagc
agcagccccgtctcaagtcctccagagccctccccgaggcatcagtctccctctgagggg
acatccagactgctctctcctcgcaggcccgtgagaggtgcgagcgagggaaaccaggga
atcagtgcaaaggatatctatgatgctgtttgctcaggaaaaagtgccatggtgactgtg
gtggacgagtggctggacagctacaaacagagccgagaggcggggttgctggtgctcatc
aacttcattgttcagtgctgcggatgcaaaggtgtggtcagcagagagatgcttgacggc
atgcagcatgctgagattatcagcacattaaccagggagtttaatgaggattcagtgaac
taccccttgagcactccaggtcttcagatgaagcgtttcaaagctagtctgtgtgaattt
gctcgggttctgcttcgctcctgtcggaatagcttgatctatgatgaatacctcttcccc
tccctgctggctctgctcaccggtctgtctgactcccaagttagagccttcagacacacc
agtactctgctggccctgaagttgatgtcaggggtggtggaagtagctgttacagtaagt
gttcagctgcagaccgcccagcgacgatacgatctggagaacagtaagaggccaaacaac
agagcttcggacaaactggagcagctgaaggccaccatcagtgagctgcaagagaacaaa
gaggagctctcctccatgatgaacgccaccttccgcggcgtctttgtacatcgttaccgt
gaccgcctgcctgaaatcagggcagcctgtatcgaggagttgggcctgtggctgaaaaca
gaccctgaagacttcctaaatgatggctgcctgaaatatctgggatggacattgcatgac
aagcaaagtccggtgcgtctgcagtgtgtgcgtgccctgcagggtctgtaccaggagaag
gagttcattggccgcctggagcttttcaccagcagatttaaagaaaggattctcagcatg
gtgctggacaaagacccagacgtggcggtggaagtggtcaatctgttgctgctgatccaa
cagagtgcagaggaaggcctgaaggaggaggagtgtggacacatctatcctttggtttat
gcttcacacagaggtctggcctctgcagccggcgccttcctctgcaacaaactgaaatgt
gtgatggctactgacacccaggggaaggatcaaagcaggaatgctgccttttttcagatc
ctcatctccttctacatccagagtgagttccacgagcacgggacgtaccttgtggacagt
ctgtgggctgtggcagggtctgagctcagagactgggagacgatgacggctctgctgctt
caagacgccggactgttgtacgaggaggagggcgcgctcttggagattatgacgtgtgcc
atcagacaggcagcacaggcaacgccacctgttgggaggagcctgggcaaaaagatcctg
agtatgaaggacaagaagatccaggaacaagacaggaatcgcattaccacacacttcatc
cctctacttccacagctgctcgccaagtactcagcagatgcagggaaagtgagccttctg
ctcaaaactcctttttacttcgatctggagatgttcagcagcactcagtggctggagaag
catctggacccgctgctgtctcagatatgtgacattgtgaagaaacacacagaggtcagt
gtgctgcaggcttgtaccctcctggtcagcaccctctgctccgaccgctacaccttctcc
tcccgcgcacacctggcgttcagtcagctgctggatgatctgactgaatgtttcaacact
tacctaagtgacctgctgaagggtagcgcagatgaggatgatgtatacaatgccacctct
gccttgaaaagaatcgctgctttgagcagtggtaaagacccaacctgttggaagctgctt
gactcctgccttgagttactgaagagcaggatggagtctctggattatgacacagagctc
atggtggcggctctgaagtgtgcagcttttcaccttatgtgggcgaaggtgaacgcagtc
aacttcaagccagctgaggctgaactgaagcgtgtgaagaaggaagtacgtttcttctgc
agaatctgtcagtcctgtttgtctctggatcagactgagataagagatcaggcatttgag
ctgctgtgtgacctgctgctgttgtacagtgtgacttcggttcgcacagagccggccctc
caaacgctggtccacctgccgtctgactctctgcgcgccgagttggcttctttccttctg
gactacgtcttcaccgacaccgaagatgtggagctcagtgatgaaggtgatgacctgaaa
atgactcttcttcagaagaaacgcaaccagctggctggttactgtaaactcgtgatctac
ggggttctggacctcagcgccgccaccaatgtcttcaagcactacagcaagtgttttaaa
gactttggggacatcataaaagagactgtgagcaagagcaaactcatcagccccatacag
agcgccaagactgtctgcctgagcctgcagcagctgttctcagagatgcttacggacggc
cagaatcagcaggatctctcagatattagagacctggccaagaagcttgccatgagcttt
ggcatcgatcttcatcgtgtccgcaaacctctggtgtccctgcacttggacggtatacgt
tttgcatttcgaagcgtgcaggacaaagaggaggaactttcaaatgtaaccttcttggaa
atcctcagcgagttcagtttcaagctgctcccacaagatcgcaaccagctagctgagttg
gtgaagtcggagtgtcccggtgctgccctctcctggccgtccgtcaggttgtatcagcgt
tctttggggtctcgctcctccaagttcagagagctggaggagggagacgatgcagtttcc
tccctcaacactcctgtagcaaaacgcaagaaaccagctcctcaggggtcagtgtccagc
acagccagagggtcctggttggagaccagcagtatccacagccacctcctgaccccagcc
ctcacctcaaccgtccagaaacagacggccaaagagccggctttcaagaagcccagagac
gcaccgtctgatgttggcagcaccttaactgacctggagtcagaggatgagttctcccag
ggaacacaaatgcgaaaagtgaaacctgtcaaacgagtctcctcgagccaaactgcaccc
actgtggagcaagaagatctggactctcacctcactttgctttcgctgattgaggatgac
gtttccgaaaaagacgaaggcaacaagtccggaggagaggagcctcagattgaagaatat
gaaagtgactccgagattgcataccctctgccctcgactcgtcatacttcagccagtttc
ctcgatgagctctttgactga
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