Kryptolebias marmoratus (mangrove rivulus): 108231438
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Entry
108231438 CDS
T05608
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03420
Nucleotide excision repair
kmr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108231438 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
108231438 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108231438 (cul4b)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108231438 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108231438 (cul4b)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
108231438 (cul4b)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108231438 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
108231438 (cul4b)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108231438 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
DUF3292
Motif
Other DBs
NCBI-GeneID:
108231438
NCBI-ProteinID:
XP_017264001
UniProt:
A0A3Q2ZD08
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All DBs
Position
LG9:21884623..21897435
Genome browser
AA seq
869 aa
AA seq
DB search
MFPTGLSSPNPPPPPTQEARAATTDVKADSGSITSPKKRKINGSEREDTSDTISSSPSKT
LNSSSSSSSSSCSPTPLHIQKKLRFEDSVDFIGLDVKMAEEAAAAAAAAASCSNNKSKAT
FLAGGVGHHANGLTKTAGSATFSSSKPGAAKKLVIKNFREKPKLPENYTQETWQKLKEAV
EAIQNSTSIKYNLEELYQAVENLCSYKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVL
FLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQS
KTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRL
MQEREVPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTAVLQKGLTHL
LDENRVQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKD
KVDHIIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELE
KMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSK
LEGMFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRL
QEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTL
EEIKLATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKIN
QIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPA
DLKKRIESLIDRDYMERDKENSNQYNYVA
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaaccccccaccaccgccgacccaggaggctaga
gccgcgaccactgatgtcaaagccgacagcggtagcatcacgtctccgaagaagaggaaa
ataaacggctccgagagggaggacaccagcgacaccatctcctcttccccctccaagacc
ctgaattcctcctcttcctcctcctcctcctcctgctctcccaccccgctgcacatccag
aagaagttgaggtttgaggactcggtggatttcattggactggatgtgaaaatggccgag
gaggctgcagccgccgccgccgccgccgcttcgtgctccaataacaaaagcaaagccacg
tttctggccggtggcgtggggcaccacgcgaacggactgaccaaaaccgcaggatccgcc
accttctccagcagtaaacccggtgctgccaagaaactagtcatcaagaacttcagagaa
aagccgaagttgcctgaaaactacacacaggagacctggcagaagctgaaagaggcggtc
gaggccattcagaacagcacttcaatcaagtacaatttagaagaactttaccaggctgtg
gaaaacctctgctcctacaagatctctgccaaactttacaaacagctcagggccgtgtgt
gaagaccacatcaaggcgcagatcgatcagttcagagaggatgccctggacagcgtgctt
ttcctgaagaaaattgacaagtgctggcaagatcattgcagacaaatgatcatgattagg
agtatatttttgtttttggatcgcacctacgttttacagaattccatgctgccgtcaatc
tgggacatgggtctggagctgttcaggttctacatcatcagcgatctgaaggtccagagt
aaaaccatcgacgggattctgctgctcatcgagagggagcggaacggagaggccatagac
cgcagtctgctgaggagcctgctgagcatgctctctgacctgcagatttatcaggactcc
tttgagcagcgctttttggaggaaactaatcggctgtacgctgcagagggacagaggctg
atgcaggaaagagaggtaccagaatatctccatcatgtcaacaaacggctggaggaggag
gctgacagagtcatcacatacctcgaccagagcacacaaaaacccctcatcgctactgtg
gagaagcagctgctgggtgaacatctcactgcggttctgcagaaagggctcactcacctg
ctggacgagaacagagttcaggatctgtctctcctctatcagctcttcagtcgagtgcga
ggtggcgttcaggtgctgctgcagcactggattgaatacataaaggcttttggaagcaca
atcgtaatcaaccctgaaaaagacaaaacaatggtgcaggaactgctggacttcaaagat
aaggtggatcacatcattgacgtgtgtttcttgaagaatgagaagtttgttaacgccatg
aaggaggcttttgaaacattcatcaacaaaaggccaaataaacccgcagagcttattgca
aaacatgttgattcaaagctgagggcgggaaacaaggaggcgacggatgaggagctggag
aagatgctggataagatcatgattatctttagatttatctatggaaaagacgtgtttgag
gctttttacaaaaaggatttggccaaaaggttgctggttgggaaaagtgcctctgtggat
gctgaaaaatccatgttgtcgaagctgaaacacgaatgtggagcggcgttcaccagcaaa
ctggaggggatgttcaaggacatggagctttctaaagacataatggtgcagttcaaacag
tacatgcagtgccaaaacattcccggcaacattgagctgacggtgaacatcctcacgatg
ggttactggccgacttatgtcccgatggaagtccacctgcctcctgagatggtgcgcctg
caggagatcttcaaaactttctacctgggcaaacacagcggcaggaagctgcagtggcag
tcgacgctaggccactgtgtcctaaaagctgaatttaaagagggcaagaaggagctacag
gtgtctttatttcaaacactcgtactgctgatgtttaacgaaggggaggagttcactctg
gaggagatcaaactcgccacaggaatagaggacagcgaactgcgccggacgttgcagtcg
ctcgcatgtggaaaagcccgggttctcaccaagatccccaaaagcaaagatgtggaggat
ggggacaagttttcctgcaacgatgacttcaaacacaagctgttcaggatcaaaatcaac
cagattcagatgaaagagacggtggaggagcaagccagcaccacggagcgggtctttcag
gatcgtcagtaccagatcgatgctgctattgtgcggataatgaagatgaggaagactctg
agccataatcttttgatgtctgaggtgtacaaccagctcaagtttcccgtaaagcctgct
gatctaaagaagaggatagagtctcttattgacagggactatatggagcgtgacaaggaa
aactccaaccagtacaactacgtggcctag
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