Kryptolebias marmoratus (mangrove rivulus): 108231595
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Entry
108231595 CDS
T05608
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108231595 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108231595 (smarcd1)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108231595 (smarcd1)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108231595 (smarcd1)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108231595 (smarcd1)
PBAF complex
108231595 (smarcd1)
GBAF(ncBAF) complex
108231595 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
108231595
NCBI-ProteinID:
XP_017264180
UniProt:
A0A3Q3B5X2
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All DBs
Position
LG4:complement(7227852..7243102)
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AA seq
515 aa
AA seq
DB search
MAARGGFQSTPTGGGGGAMGPGPPVPGAGPGMGPGTPSGRMGPSSATQNHMYRSPMSGPG
YPRPGMPPSSRMTPQGPAMGPPGYGSSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQQNRN
QHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagagggggttttcagtcaacaccgacgggtggcggcggtggagcgatggga
cctggaccgccagtaccgggcgcaggaccaggcatggggcccgggaccccctctggaaga
atgggaccgtcgtcggccacgcagaaccacatgtaccgctctccgatgtccgggcctgga
tacccgagaccaggcatgcctccatccagccgtatgacccctcagggaccagccatgggc
cctccaggatacgggagcagccccgtgtctcgccctgggatgcccggggtgatggaccct
tctcgaaaaaggccggccccacaacagattcagcaagttcagcagcagcagaaccgcaac
cagcacacaaagaagaagaagatggctgataaaattctacctcagaggatcagggaactg
gtcccagagtctcaggcttacatggatctcctggcttttgagaggaagttggaccagact
attatgcgtaagagactcgacattcaggaggccctcaaaagacccattaagcaaaaaaga
aagcttcggatcttcatatccaacactttcaaccccgcaaagcctgatgctgaggacgga
gagggcacagttgcatcatgggagctacgtgttgaaggacgtcttctggaagatacagct
gtatccaagtatgaagctaccaaacaaaaaagaaagttctcatcattcttcaagtctctc
gtgattgaattggacaaagacctgtatgggccagataatcacctggttgaatggcatagg
accgccaccacccaggagactgatggtttccaagtgaagaggcccggcgatgtgggagtt
cgctgcaccgtcctgctcatgctcgactaccagccccctcagttcaagctggacccccgt
ctggcccgtatgttgggtattcacacccagaccagacccgtcatcattcaggccctgtgg
cagtacgtcaaaacgcataaactccaagacccacatgagcgcgagtttatcaactgtgac
aaatacctgcagcagatctttgagactcagcgaatgaagttctctgaaatcccacagcgt
ttgcatgcactgctgatgcctccagaacccatcatcataaatcatgtgatcagtgtggac
cccaatgaccagaagaagacggcttgttatgacattgatgtcgaggtggacgacacgctg
aagacccagatgaactccttcctgctgtccacagccagccagcaggaaatagcaggactg
gataacaagatccacgaaactatcgagactatcaaccaactgaaaacccaaagggagttc
atgttgagttttgccagagatcctcagggatttataaacgactggcttcagtcccagtgc
agagacctcaagactatgactgatgtggtgggaaaccccgaagaggagcgaagagcagag
ttttactaccagccgtgggctcaggaggctgtctgtcgctacttctactccaaagtccag
cagaggcgacaggagctggagcaggcgctcggcatcaggaacacttga
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