Kryptolebias marmoratus (mangrove rivulus): 108231691
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Entry
108231691 CDS
T05608
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010
MAPK signaling pathway
kmr04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108231691
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108231691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
108231691
NCBI-ProteinID:
XP_017264425
LinkDB
All DBs
Position
LG3:19394843..19496575
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AA seq
2172 aa
AA seq
DB search
MMVILLNCVTLGMYQPCENIDCSSDRCQILQAFDAFIYMFFALEMVVKMVALGIFGRRCY
LGDTWNRLDFFIVMAGMIEYSLDLQNINFTAIRTVRVLRPLKAINRVPSMRILVNLLLDT
LPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPEENFTLTTGISLPRPYYMANEDDE
RPFICSLPVDNGIMSCSDVPARREGGRACCLDKEDALYRQSLGLSPEPLNNGTVSVAGLC
VNWNQYYIRCHTGSSNPHKGAINFDNIAYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFI
YFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMQEQRAKCSSSSTLASEPGDCYEEL
FQLVCHVLRKARRQTVALFYTLRGKPRGFRGVGRGRGGGEERERKANGRGGRERRRVIRS
GPPCPHHNKSDYNSTADPMALTATSATDGCPQCASALALRDGVGPARNVASDETEEGGME
ETDREDEKSGGKKKDKKGHKRAGNHNGCSPKIQCKELWYQTRKKLWGIVESKYFNRGIMI
AILINTISMGIEHHDQPEKLTIVLEICNIVFTSMFSLEMILKLTAFGSFNYLRNPYNVFD
GIIVIISVCEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCML
LMLFIFIFSILGMHIFGCKFSLKTETGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLY
NGMAATSPVAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDDDHSSSNFDES
EKHDSIKLSDPRICTLTPNGHVELGALSGPRGSYSSEKRSFTDESRKSSVMSLGKSSLER
RSLSLRHGRSSNYHNWGRPFPPQSGWSRRSSSNSLGRRSYGFGGAPPVGGSLRVRSSRSP
YSYNYASEQESLLAHSYHSHHPPHHHHPPPPPLFLSRHFGVRRDRRALSLELPELLRTGG
QIPEPARRSGSGAGGSPAGSGTGSVLGVDHRDCNGKAPGPHTHLITDVFPQVNARKDRAD
LDEETDYSLCFRIQKMMEVYKPDWCETREDWSVYLFSPQNKFRVLCQSIIAHKLFDYVVL
VFIFLNCITVALERPKILQGSLERLLLTISNYIFTAIFVAEMTVKVVSMGLYLGETAYLR
SSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETL
ITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFSYCVGFDVKNITNKNDCLVANYRWVQH
KYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQPVTNNNPWMLLYFISFLLIVS
FFVLNMFVGVVVENFHKCRQHQEVEEARRREEKRQRRMEKKRRKAQKLPYYASYGRTRLA
IHALCTSHYLDLVITFIICINVITMSLEHYSQPQSLETGLKYCNYFFTSTFVIEASLKLV
AFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLL
KMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNADYPCEGMSRHA
TFENFGMAFLTLFQVSTGDNWNGIMKDTLRDCPSDRPGNDYGCHAGLQFISPLYFVSFVL
TAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELELAQGGLCCMMGGIGTIAGATGG
AAAGTGMGGATPAAITAGTVGASSGTVMAPLRDGGGGGEGGGNPVHEGHAHHRCRLYSPA
QESQWLDSVSLLIKDSLEGDMIDNLSGSVFHHYCSSPVCKDCKRHPQEIRLAEVEQASLM
SEQLSDKSSSPALPDDLSLDEHCSYQLLVRDTQRGSSDSHSSEELPTQGDYMGLPLCSSG
SDGGVQELFEELNPSSANDKDADGRRISAADVPSPMFHLPADFFHPAAAAHSESHRGGGR
PRDRGSSRLASPASWASLRSPGANSRPLSSQHTSHSDSSLATGSSDGSLQTTVEEGISSG
VLPPQHLGLPMPLLVPTPSLPPHPQGAPTTDQGPSLLKRRSSAATLQATRRQQRSQSSSG
GESTNPGCLQQDFMNTSNEEVGTGTGRDSCHQTLNNKHLSETLNSLSLTSLFTPDSLAPT
PMKKCNSTGSLDQSNVSAWSKDGRHFYSIDAHGFLSNPWTAGRARGAQEDSNISFGMKKS
SQSTNLSSRKKR
NT seq
6519 nt
NT seq
+upstream
nt +downstream
nt
atgatggtaatcctgctgaactgcgtgaccctggggatgtaccagccctgcgagaacatc
gactgctcttcagaccggtgccaaatactacaggcctttgatgcattcatctacatgttc
tttgctctggagatggttgtaaagatggtcgctctgggaatctttggtcggcgttgttac
ctcggggacacgtggaaccggctggatttctttatcgtcatggcagggatgatcgaatac
tctctggacctgcagaacatcaacttcacagccatccgaacagtgagggtcctgcggcct
ctcaaagcaattaacagggtgccaagcatgcgcatcctggtaaacctgctgcttgacact
ctgcccatgctggggaacgtgctcctcctctgcttctttgttttcttcatctttggcatc
atcggtgtgcagctgtgggcggggctgctgagaaaccgctgctacccggaggaaaacttc
acactgactacaggtataagcctccctcgaccttactacatggccaatgaggatgatgag
aggcctttcatctgctccctacctgtcgacaatggcatcatgtcctgctcggatgtccca
gcccgtcgtgaaggaggtcgggcctgctgcctggataaggaagacgccctgtaccgtcag
tcactcggattaagccctgaacctttgaacaacggcactgtcagtgtcgctggtctgtgc
gtcaactggaatcaatactacatcagatgtcatacaggaagcagtaacccgcacaaagga
gccatcaactttgataacattgcctatgcttggattgtcatctttcaggtgatcactctg
gaaggctgggtggagatcatgtactatgtgatggatgctcactctttctataacttcatc
tacttcattctactaataatagttggttcgttcttcatgatcaatctgtgcctcgtggtc
attgcaacccagttctcagagactaagcagcgggagcatcagctgatgcaggagcagcga
gctaagtgttcttcctcctccacgcttgccagtgaaccaggggattgctatgaagagctc
ttccaactggtgtgtcacgtcctccgcaaggccaggagacaaactgtcgctcttttttac
accttgcggggtaaacctcgtggattccgtggtgttgggagaggaagaggaggaggggaa
gagagggagcggaaggccaatggaaggggaggacgtgagaggagacgggtgataagatct
ggtcctccttgtccccatcataataaatcagactacaactctacagccgaccccatggcc
ctcacggccacctctgccacagatggttgccctcagtgtgcttcagcactggcactcaga
gatggcgtgggaccagctcgcaatgtagcctctgatgaaactgaagaggggggcatggag
gaaacagacagggaggatgagaagtccggcggtaaaaagaaagacaagaaaggccataaa
cgtgctgggaaccataatggctgcagcccaaagatacaatgtaaggaattatggtaccag
acgaggaagaagctgtggggcattgtagaaagcaagtacttcaaccgaggcatcatgatt
gccatcttgatcaacaccatcagcatgggcatcgaacaccatgatcagccggagaaactg
acgattgttctggagatttgcaacatcgtcttcaccagcatgttctccttggagatgatc
ctgaagctcacagcctttggctcctttaactatttgagaaacccctacaatgtctttgat
ggaatcatcgtcattataagtgtttgtgagatcatcggccagtcggacggtggtttgtct
gtcttgaggaccttcaggctgctgagggtcctgaagctggtcaggttcatgccagccctc
agaagacagctggttgttctgatgaagactatggacaatgtggccaccttctgtatgtta
ctcatgctcttcatcttcatctttagtatccttgggatgcacatctttggctgtaaattc
agtctcaagacagagaccggagatacagtaccagataggaagaactttgactccctgcta
tgggccattgtcaccgtttttcagattctgacccaggaagactggaatgtggttttgtac
aacggcatggcagccacctcaccagtcgctgctctttactttgtggcactcatgaccttt
ggaaattatgttctcttcaacctgctggtggccatcttggttgaaggatttcaggcagag
ggtgatgccaatcgctcctattctgatgacgaccactcttcgtccaactttgacgagagc
gagaaacacgactccataaagttgtcggatcccaggatctgtactctaacaccaaatggt
catgtggagctcggtgccctctcaggtcctcggggatcctactcctcagaaaagagaagc
ttcacagatgagtccagaaagagcagcgtgatgagcctaggcaaaagcagcctggagaga
cgctccctttctctgcgccatggccgcagttccaactaccacaactgggggcgaccgttt
cctcctcagtccgggtggagtcgcaggtcgagctccaacagccttggtcggaggagttat
ggcttcggtggggctcctccagttggaggcagccttcgtgtccgcagctcccgctccccc
tactcctacaactatgcctcagagcaggagtcccttctggctcattcttatcactcccat
catcctcctcatcatcatcatccacccccgcccccacttttcctctccaggcattttggt
gtaaggagggatcgacgagctctttccctggagctccccgaattgctccggacaggggga
cagattcctgaacctgcaaggaggagtgggtctggggctgggggttcccctgcaggatct
ggaactggtagtgttttaggagttgatcatcgtgactgtaatggcaaggcaccgggcccc
cacactcatctgataactgatgttttccctcaagtcaatgcacgcaaggacagagcagat
ctcgatgaagaaacagactatagtttgtgcttccgtatccagaagatgatggaggtgtac
aagccggactggtgtgagaccagagaggactggtctgtctatttgttctccccccagaac
aagttcagagttctctgtcaatccattattgctcataaactctttgactacgtggtcctg
gtctttatcttcctcaactgcatcacagtggctctggagaggccaaagattctgcaaggc
agcctggaaagattgttgcttactatatccaactatatctttacggcaatcttcgtagcg
gagatgactgtcaaggttgtgtccatgggtctgtacctgggggagacagcatatctgagg
agcagctggaatattctggatggtttcctggtttttgtgtccctgattgacattgtggta
tcaatggcgggaggggctaagatcctgggggttctacgcgttctcaggttgctcaggact
cttcgtcctctcagagtgatcagcagggctccagggctgaagctggtggttgagactctg
atcacttccctcaaacccattggcaacattgtcctcatctgctgcgcctttttcatcatt
tttggcattcttggtgttcagctcttcaaagggaagttctcttattgtgtgggtttcgat
gtgaagaacatcactaataaaaatgactgcctggttgccaactaccgatgggttcagcac
aaatacaattttgacaaccttggacaggctcttatgtccttgtttgtgctggcatcaaag
gacggctgggtcaacatcatgtaccatggactggatgcagtgggaattgaccagcagccg
gtgaccaacaacaacccgtggatgctgctctacttcatctccttcctactgattgtcagc
ttctttgtcctcaacatgtttgtgggcgtggtggtggagaatttccacaagtgtcggcag
caccaggaggtagaggaggccaggcgacgagaagaaaaacgccagcgccgcatggaaaag
aagaggagaaaagcccagaagctgccatactatgcctcctacggtcgtacccgcctggcc
attcatgctctgtgtaccagccactatctggacttagtaatcacctttatcatctgcatc
aatgtgatcaccatgtccctggagcactacagccagccacagtctctggagactgggctg
aagtactgtaactacttcttcacctccacctttgtgattgaggcctctttgaagctggtg
gcctttggatttcggcgcttcttcaaggacaggtggaatcagctggatttggccatcgtg
ttgctgtctgtaatgggaatcactctagaggagatcgagatcaacgcctccctccccatc
aaccccaccatcatcaggattatgagggtgctcaggatagcccgagtgctgaaattattg
aaaatggccactgggatgagagcgctgcttgacacggtggtccaggctcttcctcaggtg
ggaaacttgggtctgctttttatgttgctgttttttatctatgccgctctgggagtggag
ctctttggggagttagtgtgcaatgctgactacccctgtgagggcatgagccgccatgca
acatttgaaaactttggaatggcctttcttacactcttccaagtatcaacaggtgacaac
tggaacggtatcatgaaggacacgctgagggactgcccatcggatcgtccaggcaacgac
tacggctgccacgctggactccagttcatctctccactgtattttgtgtccttcgtgctc
acagctcagtttgtcctgatcaacgtggtggttgctgtgctcatgaagcatctggacgat
tccaacaaagaagctcaggaggatgctgagatggatgcagaaattgagctggaattggcc
cagggaggcctctgctgcatgatggggggcattggcaccattgccggggccacaggtggt
gctgcagcagggacaggcatgggcggcgcgacgcctgccgcaatcacagcggggaccgtc
ggagcttcaagtggcactgtaatggcacctcttcgagatggaggaggaggaggagaagga
ggaggcaacccagtccacgagggacacgcacaccatcgatgccggctctactctcccgct
caagaaagccagtggctggacagcgtgtctctgctgattaaggactcactggaaggggac
atgattgacaacctctctggctcagtttttcatcactactgctcttctccggtctgcaag
gactgcaagagacacccacaggagatccgactggcagaggtggagcaggcgtccctgatg
tcagagcagctgtcagacaaatcatcgtctccggctctgccggatgacctcagcctggat
gaacactgcagctaccagctgcttgtcagagacactcagagaggcagcagcgattcccac
agttcggaggagttgcccacccagggagattatatggggcttcctctctgcagctcagga
agtgacggtggtgttcaggagttgttcgaggagctaaatccttcctctgcaaatgacaaa
gatgctgacggaagaagaatcagtgcggccgatgtcccttcacccatgtttcatctacca
gctgacttttttcatcctgctgctgcagctcattcagaaagtcacaggggcggggggaga
ccaagagacaggggttcatccaggttggcctccccggcctcctgggcctcgctccgctca
cccggagcaaatagcaggcccctgagctcccagcacacatcccacagtgactcatctctg
gccaccggcagttcagatggcagcctgcagaccactgtggaagaagggatcagctctggc
gtcctgccaccccagcatctgggtctccccatgcctctcctcgttcctacccccagcctt
ccgccgcacccgcaaggagcacccacgacagaccagggtccgtctttgctcaagagacgg
agttctgctgcgacgctccaagctactcgcaggcagcagaggagccagagcagcagcgga
ggtgagagcaccaaccctggctgcctccaacaggacttcatgaacacttcgaatgaagag
gtgggcacggggacgggcagagacagctgccaccagaccctcaacaacaaacacttgtca
gaaacactgaacagcctctccctgacatcactgttcacgccagactccctggcacccaca
ccgatgaagaaatgtaacagcaccggctctctggatcagtcgaatgtctctgcctggagt
aaagacggtcgtcacttctacagcatagatgcacatggcttcttgtccaacccatggaca
gcaggaagggcaagaggtgcacaagaagacagtaacataagctttggcatgaaaaaaagc
agccagtccacaaacttaagctccaggaaaaaaagatga
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