Kryptolebias marmoratus (mangrove rivulus): 108231846
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Entry
108231846 CDS
T05608
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108231846 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108231846 (sart1)
04121 Ubiquitin system [BR:
kmr04121
]
108231846 (sart1)
Spliceosome [BR:
kmr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
108231846 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
108231846 (sart1)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108231846 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
108231846
NCBI-ProteinID:
XP_017264694
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All DBs
Position
LG3:complement(15394406..15397825)
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AA seq
776 aa
AA seq
DB search
MGSSKKHKEKSRDKEVEDRRREHKKHRHKERERDRDTSDRDGARDKRKRSRSREKSRRDS
RGKVERSSGEPRIKRERVDAGYEESGADVQPQSASGDASLSIEETNKLRAKLGLKPLDLN
ENKKELGTKEEPMVAETINPVVIQQQKEMREKLAAMKEKRLLNQKLGKVKALGDEDWLDS
PTAWIEKSRKLEKEKEMAEKRAKLLEEMDEEFGVSSLVEEEFAQSKLDSYSSRDLKGLKV
QHKVESFKEGHTTILTLQDKGVLEEEEDVLVNVEMVDKEKADKNVELKKKKPDYKPYEEE
ESVDDMVTFKSRSVLSKYDEEIEGEKKKSFRLSTWGFADGERERELQAMKETLRNQAQSL
EMPALTIASEYYTPQEMVGFKKTKRRVKKIRKKEKPTAVADELLDDTRSSDFGSRSRGRG
RKQAGDNDNEAEKGGQEETAWPHEVPQMSDDIRMAEMDISDEEDFVPPESAVIEEDEAEQ
ELQKQLEKQRKLRQKQLLKDSGEKVAEQIKEFVKDDDDNDPEKRNNIVFNATSEFCRTLG
DIPTYGLSGNREDQEDIMDFEQEEEKDDAGDSDSETDENVGWSTVNLDEEQQQADFSTAS
ATILDEEPIVNSGLAAALLLCKNKGLLDTQMQKVARVRAPKGSLPNDNYCIEDKMGFDDK
YSRREEYRGFTQEFKEKDSYKPDVKIEYVDESGRRLTPKEAFRQLSHRFHGKGSGKMKTE
KRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANTITK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttccaagaaacacaaggaaaagagtcgcgacaaggaagtggaggatcgccgc
cgcgaacataagaaacatcggcacaaggagcgagagagggacagagacacctcagatcgg
gatggcgctcgggacaaacgaaaacgctccagatccagggaaaaaagcaggcgagatagt
cgcggcaaagtcgagagaagcagcggggagcctcgcatcaagagggagagagtagatgcc
ggttatgaggaaagcggcgcagatgtgcagccccagagtgcgagcggagatgcgtctctc
agcattgaggaaacaaacaaactccgggccaagctgggtctgaagcctctggacctaaac
gagaacaagaaagagcttgggaccaaagaggagcctatggtggcagagaccatcaacccc
gttgtcattcagcagcaaaaagagatgagagagaagctcgcagccatgaaagaaaaacgc
cttctcaaccagaaactgggcaaggtcaaagccctcggcgacgaagactggttagacagc
ccgactgcttggattgagaagagcagaaagctggaaaaagaaaaagagatggctgagaag
agagccaaactcctggaagagatggatgaagagtttggcgtcagcagtcttgtggaggag
gagtttgcacagagtaaactggattcgtattcttcacgagatctcaaaggccttaaagtg
cagcacaaagtagagtccttcaaggagggccatacaaccatcctgaccctgcaagacaaa
ggtgtgctcgaagaggaggaagatgtgcttgtgaacgtggaaatggtggacaaggaaaaa
gctgacaagaatgtggagttaaaaaagaaaaagccagactacaagccctatgaagaagag
gagagcgtggacgacatggtcacatttaaatcccgctccgtgctgtcaaagtatgacgaa
gaaattgagggcgagaagaaaaagagctttaggctgagcacgtggggcttcgctgatgga
gagcgggagcgagagctccaggccatgaaggaaacgctgcgaaaccaggcccagtccttg
gaaatgcctgctctgactattgcttcagagtattacacgcctcaggaaatggtcggcttc
aaaaagacaaaacggcgcgtgaaaaagatcaggaagaaggagaagccgacagcggttgcg
gacgagctccttgatgacacccgaagctccgattttggctccaggtcacgtggtcgtggc
cgcaaacaggcaggcgataacgacaatgaagcagagaaaggtggccaagaggagaccgcg
tggccacatgaagtcccccagatgtctgatgacataaggatggcagagatggacataagt
gatgaagaagattttgtacctcctgagtcggctgtgatcgaggaggatgaggcagagcag
gagctgcagaaacagctggagaagcagaggaagctgagacaaaagcagcttctcaaagac
tctggggagaaggtggcagagcagatcaaagagtttgtcaaagatgacgatgacaacgac
cctgaaaaaagaaacaacatcgtcttcaacgccacctcagagttttgcagaactctgggc
gatattccgacttatggactctccggcaacagggaggaccaggaagatatcatggacttt
gaacaggaagaagagaaagacgatgctggagattcagactccgaaacagatgaaaatgtt
ggatggagcacagttaatctggacgaggagcaacagcaggctgatttctccacagcctct
gccaccattttggatgaggagcccattgtcaactccggcctcgctgctgcgctgctgctt
tgcaaaaataaaggcctgttggacactcagatgcagaaagtagctcgcgttagagcgccg
aaggggtctctgcctaatgacaactactgcatcgaggacaagatgggctttgacgacaag
tacagtcgccgggaggaatacagaggcttcacgcaggagttcaaggaaaaggacagctac
aagcccgacgtcaagatcgagtacgtagacgagtctgggcggagactcaccccaaaagag
gctttcaggcagctgtctcatcgattccacggcaaagggtctggaaagatgaagaccgag
aagaggatgaaaaagctggaggaggaggcgctgctgaagaagatgagcagcagtgacact
cctcttgggacggtggctttgctccaagagaaacagaaatctcagaaaacgccatacatc
gtgctcagtgggagtgggaagagtatgaacgcaaacaccatcactaaataa
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