Kryptolebias marmoratus (mangrove rivulus): 108231857
Help
Entry
108231857 CDS
T05608
Symbol
psip1a
Name
(RefSeq) PC4 and SFRS1 interacting protein 1a isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108231857 (psip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108231857 (psip1a)
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
108231857 (psip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
Motif
Other DBs
NCBI-GeneID:
108231857
NCBI-ProteinID:
XP_017264760
LinkDB
All DBs
Position
LG3:complement(12577657..12588314)
Genome browser
AA seq
502 aa
AA seq
DB search
MAREDWKPGDLIFAKMKGYPHWPARIDEVPDGAVKPSNIKYPIFFFGTHETAFLGPKDIF
PYLPNKEKYAKPNKRKGFNEGLWEIENNPKVELTAPKPVPPESFTEKDSDSGPEGGEVAA
DKEVKSKVPGSEAELENVEEEEEEEEEGSLMSEQGLQSQDSAAPKDLTDVPKPKRGRKKK
SDADQENEKDDAPASPVSPAGGEGPKKRGRKPKSEKLLLLQQQDQQGSGSEMDSAESDKK
RKRAQEDKQQSAEEEKRKKREGSKGKDAEAKEPEAKKKKQSKDDGSSGSDDDESQKNKGR
KKLHNLEMDKDVRRWKADETREPIKDDGKKTEAAPKKKEMSTDLKLQKLHSTIKVSLKID
NPDIKKCLDALDEISALQVTTQHLQKHSELIATLKKIRRFKASQDIMDKATMLYNKFKTM
FLVGEGDCVLSQVLNKSLAEQRQYEEAKKGALKRAEHVKDGNTDKMTNGDVSPEEKKHEA
EKHEDASAGENHSASKLQEEST
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagaagattggaagccaggtgatcttatttttgccaagatgaagggttatcct
cactggcccgcgagaatcgatgaagtaccggatggtgcggtgaagccatccaacatcaag
tatcccatcttcttctttggcacccatgaaacagcgttcctgggcccgaaagatatcttc
ccgtacctgccgaacaaagagaagtacgcgaagcccaacaagaggaaaggcttcaatgaa
ggactgtgggagattgagaacaacccaaaagtcgagcttactgcgcccaagccggtccct
cctgagtctttcaccgaaaaggattcagacagcggcccagaaggaggagaagtggcagct
gacaaagaagtgaaatccaaagttccaggaagtgaggctgagctggagaatgtggaggag
gaggaggaggaggaggaggaagggtctctgatgtctgagcagggtcttcagagccaggat
agtgctgctccgaaggatttgacagacgttcccaaacccaagagaggaaggaagaaaaag
agcgatgctgaccaggagaatgaaaaagacgacgctccggcgagtccagttagtcccgca
ggtggagaagggcctaaaaaaagaggcagaaagcctaaaagtgagaagttgcttttgctc
cagcagcaggaccagcaaggctcaggaagtgaaatggacagcgctgaatcggataaaaag
agaaagagggcacaagaggacaaacagcaaagtgcggaagaagaaaagagaaagaagagg
gaaggtagtaaagggaaggacgcagaggccaaagagcctgaagccaagaagaagaaacaa
tccaaggacgacggctcctctggttcggatgacgacgagtctcagaaaaacaaaggcagg
aagaaactgcacaacttggagatggacaaagacgtgcggcggtggaaggcagatgaaacg
agagaaccaatcaaggatgatgggaagaaaactgaggcagcacccaagaaaaaggaaatg
tcaactgacttaaaactgcagaaactccacagcacaatcaaagtttccctgaaaatcgac
aaccctgacattaagaagtgcttggacgcgttagatgaaataagcgcccttcaagtcaca
actcagcatctgcagaaacacagtgaacttattgcaacattaaaaaagatccggagattc
aaagccagccaggacatcatggacaaggccaccatgttgtacaacaagtttaaaaccatg
tttcttgttggagagggcgactgtgtgctcagccaagtgctcaacaagtccttagctgaa
cagaggcaatatgaggaggcaaagaaaggagcactgaagagagctgaacatgtcaaagac
ggcaacacagacaagatgaccaacggagacgtgagccccgaagagaagaaacatgaggcg
gagaagcacgaagacgcttcagctggagaaaatcacagtgcttcgaagctccaggaggag
tccacttga
DBGET
integrated database retrieval system
