Kryptolebias marmoratus (mangrove rivulus): 108231945
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Entry
108231945 CDS
T05608
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
kmr03037
]
108231945 (pkd2)
04040 Ion channels [BR:
kmr04040
]
108231945 (pkd2)
Cilium and associated proteins [BR:
kmr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108231945 (pkd2)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108231945 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
108231945
NCBI-ProteinID:
XP_017264879
UniProt:
A0A3Q2ZL62
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All DBs
Position
LG3:13156898..13166323
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AA seq
911 aa
AA seq
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MSSSRVRPQQLPQTQAARSPRQLDSSEGIEMEHIQQRELGLGGAAGAPSPPSRQAWSRDN
PGFEPEEEQIMEADWPPASPGRRSVSTASSSSCSSCSSGLGGGYDRGGGSGARIPRGGPY
PTPTPTLTAQHQDGHEHPSCMKHILQKIRILWGTDLMEDSDSSRERYLRNVLREMLTYIA
FLITVCVLTYGMVNANMYYYTKVMSQLFLDTPLSPGDPTTFRSLSTVEDFWKFTQGPFLS
DMYWEVWYNNKSLPENQSLIYYENLLLGVPRLRQVRVRNESCSVHGDLRDEVQDCYDVYT
PSNEDTASFGPKNGTAWVYTRESEMNGSSFWGQVSKYGGGGYYQDLSRTKEESAAQLRFL
KDHLWLDRGTRAVFLDFSVYNGNINLFCVARLLVEFPATGGAVSSWQFQTVRLIRYVSSW
DYFVGVCEVAFCLFVLYYVVEEVLEIHIHRLHYFKSTWNCLDVLLVALSVVAIIMNITRT
ALARNLLSGLLENYTAHPSFEPLADLQVQFNNMAAVIVFFSWVKLFKFININKTMSQLTS
TMSRCAKDLMGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQASVFTQFRIILGDFNFSE
IEEANPVLGPIYFTTFVFFIFFILMNMFLAIINDTYSEVKADMSQQRSEMEMTDLIKKGC
NKALMKLRLKKTAVDDISDSLRQAGGKANLDELRQDLKGKGHTEAEIQAIFAKYDQDGDP
ELTEHEHQQMRDDLEKEREDLELERNSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRG
SSSGGVSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEGMERAKLKRRDVLGRLLDRV
VEDERLGRDTDAHKEQMERLVREELERWESDDAVSQVSHPQTATPVGPRPRPASSLSADG
PDASANGGAHV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatctcgagtcagaccccagcagctgccgcagactcaggcggccaggtcgccc
cgccagctcgactcgagtgagggcatcgagatggagcacatccagcagcgggagctgggg
ctcggaggggccgcgggcgccccgtccccgccgtcccgacaggcgtggagccgggacaac
ccgggcttcgagcctgaagaggagcaaatcatggaggcggactggcctccggcgagtccc
gggaggcgctcggtgtccacggcctccagcagcagctgcagcagctgcagcagcggcctg
gggggcggctacgaccgcgggggaggcagcggcgcccggataccccgtggagggccctac
cccaccccgaccccgactctcacggcccagcaccaagacggccatgagcaccccagctgc
atgaagcacatactccagaaaatcagaattctgtggggcacagatttgatggaggacagc
gacagcagccgggagcggtacctcaggaacgttctgagggagatgctgacgtatatcgcc
ttcctcatcaccgtttgcgttttgacctacgggatggtgaacgccaacatgtactattac
accaaagtcatgtcccagctgttcctcgacacaccgctgtctcctggggaccccactact
ttcaggagcctctccactgtggaggatttttggaagttcacacaggggcccttcctcagt
gacatgtactgggaggtttggtacaacaacaagagcctgccggagaaccagagtctcatc
tactacgagaatctcctcctcggcgtgccgaggctccggcaggtcagagtccgcaatgag
tcctgctccgtccacggggacctgcgggatgaagtccaggactgctacgacgtttatact
cccagcaacgaggacaccgcctccttcggcccgaagaatgggacggcgtgggtgtacacc
agggagagcgagatgaatggcagcagtttctggggtcaggtgtcaaagtacggcggtggg
ggatactaccaggacttgtctcggacgaaagaggagtcagccgctcagctgcggttcctc
aaagaccacctgtggctggacaggggcacgagggcggtcttcctcgacttctctgtctac
aacggaaacataaaccttttttgcgtggccaggttgctggtggagttccccgcgaccggc
ggggcggtgtcctcctggcagtttcagacggtgcgtctgattcgatacgtctccagctgg
gactactttgtgggcgtgtgcgaagtggcgttctgcctgtttgtcctctactacgtggtc
gaggaggtgctggaaatccacatccaccggctgcattacttcaaaagcacgtggaactgc
ctggatgttctcctcgttgcattgagtgtcgttgccattatcatgaacataaccaggaca
gccctggccagaaacctgctcagcggcttgttggaaaactacaccgctcaccccagcttc
gagcctttggccgacctgcaggtccagtttaacaacatggccgcggtcatcgtcttcttt
tcctgggttaagctgttcaagttcatcaacatcaacaaaaccatgagtcagctgaccagc
accatgtcccgctgcgccaaggacctcatggggttcgccatcatgttcttcatcatcttc
ctggcgtacgctcagcttgcctacctggtgtttgggacgcaggtcaacgatttcagcact
ttccaggccagcgtatttactcagttccgaatcattctcggggactttaacttctcagag
atcgaggaggcaaacccggtgctcgggcctatttatttcaccaccttcgtcttcttcatt
ttctttattctcatgaacatgttcctggccatcatcaacgacacctactccgaggtaaag
gcggacatgtcgcagcagaggtctgagatggagatgaccgacctcatcaagaagggttgt
aacaaagctctgatgaagttaaggctgaagaagacggccgtagatgacatctccgacagt
ctgcggcaagcggggggcaaagccaacctcgacgagctccgccaggacctgaaagggaag
ggccacacggaggcggagatccaggccatcttcgccaagtacgaccaggacggcgacccc
gagctgacggagcacgaacaccagcagatgagggacgacctggagaaggagagagaggac
ttggagctggagcgcaactcgctgactcgacccagcagcgggcggagcttccctcgcacc
caggacgactcggaggaggacgatgacgaggactccggtcacagttctcggcgccgtggc
agcagctcggggggcgtgtcatacgaggagtttcaagtgctggtgaggcgagtggacaga
atggagcactccatcggcagcatcgtgtccaagatagacgccgtgatcgtgaagctggag
gggatggagcgagccaagctgaagaggagagacgtgctgggcaggctgctggacagagtc
gtggaggacgagcgtctgggtcgggacacagacgcccacaaggagcagatggagcgactg
gtgagggaggaactggagcgctgggagtcggacgacgccgtctcgcaggtcagccaccct
cagacggccactcccgtcgggccgcggccccgccccgcctcctccctgtccgccgacggc
ccggacgcgagcgctaacgggggcgctcacgtgtga
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