KEGG   Kryptolebias marmoratus (mangrove rivulus): 108232026
Entry
108232026         CDS       T05608                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:kmr01009]
    108232026 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:kmr03036]
    108232026 (kdm5c)
Enzymes [BR:kmr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108232026 (kdm5c)
Protein phosphatases and associated proteins [BR:kmr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108232026 (kdm5c)
Chromosome and associated proteins [BR:kmr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108232026 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD
Other DBs
NCBI-GeneID: 108232026
NCBI-ProteinID: XP_017264987
LinkDB
Position
LG8:9181772..9200573
AA seq 1582 aa
MEAEEFIPPPECPVFEPSWEEFQDPLGYIAKIRPIAEKSGICKVRPPPDWQPPFSVELDS
FHFTPRIQRLNELEAETRVKLNYLDRIARFWEIQGSSLKIPHIERRIVDLYSLSKIVTDE
GGFEMVCKERRWARVAQRLGYPPGKNVGSLLRSHYERIVYPFEMFQSGASLLHYKPKHYD
GEDVDKEYKPHSIPLRQSVQPSKMSSYGRRANRCQPDGPEDLAPHPLTTGSQLISAPEPT
EEDIEKNPELKKLQIYGAGPKMMGLGLVARDKGLRKKDELPQTVTIKDSELPAPSVPPVK
SEPPEPEERQTDGSTSSPQLPPHSLTVKMEVKKEELQDENDKDGDNPDGSKMTMRLRRNP
NNPQCVDSYVCRMCGRGDDDEKLLQCDGCEENYHSYCLLPPLSDTPKCKWRCPKCVAEEC
KKPSEAFGFEQATREYTLQSFGEMADAFKADYFNMPVHMVPPELVEREFWRLVSCIEEDV
TVEYGADIHSKEFGSGFPMMNGKKKLTKEEEGYARSGWNLNVMPVLEQSLLCHINGDISG
MKVPWLYVGMVFSTFCWHIEDHWSYSINYLHWGEPKTWYGVPSVAAEQLEDVMKKLTPEL
FEFQPDLLHQLVTIMNPNILMAHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN
FCTADWLPAGRHCIEHYRRLRRYCVFSHEELTCKMAASPEKLDLNLAAATHREMFIIVQE
ERKLRKNLMERGITEAEREAFELLPDDERQCDKCKTTCFLSALACSNCPERLVCLYHTQD
LCNHPTEKLYLRYRYTLDELLAMLHRLKVRSESFDSWANRVKEALEQEEGNKIEMYYLEK
LKIEAAEKKFPDNELLRKLNSVLKDIMYCQQTSTELLCNSKTGEGRITLQELKSMVDKMQ
NLPCVINQLEEVQAVLKTIEEFQKRAQVLINNKDWRKDSPPPEQLQSLLEEGAKLSVVAP
ECDLLQGLKEQGHWLEEVRRTLGTEGGEKHEVTLDVLRNLMEAGCNVPQSGSVETAMAEL
QELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEAQLIPVKLPNILALQSCLVRARAWV
TDLEEIQNGEHYPCLDDLEGLVAIGRDLPVFMEELRQLELQVASAHSWRDKATKTFLKKS
SQHSLLEVLCPCAKRRNKRVETELLEDDSDTNTLGLSAQALRDPAAIVMAFKEGEHQEKE
ALLRLQEVNMCKSGLNTASCEESRRWDEAMETDVSSHCENSVKENGNSNHGRPSPPQSVC
VCAGQTRAPQLRCHLCKDWFHGGCVPFPSLLPSSGPPISPLCWWDWDTRFLCPQCQRSRR
PRLETILALLVALQRLPVRLPEGEALQCLTERAITWQGRAKEALETPELQQALQKLQELK
ETLHYDAEEEEDEKKEAEGNSVIVLSDSEGGEGDDDVIDLTEESPRKKTKETGATQAECQ
NGVGKKSNVTGVGSLLSLLPRLKGQVVELSPATRVQLQELQLEGDLLEVSLDQTQTLYRV
LQAASDPPRETLHTLIQIELEEQRRTRRVRPKESKRKRKGHRGGSGEEAGEKSHDVLQSK
KTCPLKLSPSAHLPVETHTEML
NT seq 4749 nt   +upstreamnt  +downstreamnt
atggaagcagaagagtttattcctcctccggagtgtccagttttcgagccgtcatgggag
gagtttcaggatcccttaggctacatcgccaaaatacgtccaatagcagagaagtctgga
atctgtaaagttcgacccccgccagactggcaaccaccattttcagttgagctggacagc
tttcacttcacacctcgcatccagaggcttaatgagttggaggctgaaaccagagtgaag
ctcaattatttggaccgcatcgccagattttgggagattcagggctcttctctaaaaatc
ccacatattgaaaggcgcatcgttgatctttacagcctgtcgaagattgtgacagatgag
ggaggctttgagatggtctgtaaggagcggcgctgggctcgtgtagcacagaggcttggc
taccctccaggcaagaacgttggctctctcctgcgctcgcactatgagaggattgtctac
ccatttgaaatgttccagtcgggggccagccttctgcattacaagccgaagcactatgac
ggcgaagacgtggacaaagagtacaagcctcactccatcccgttgcgacagtccgtgcag
ccgtccaaaatgagcagctacggacgcagagcgaaccggtgccagcccgatggtccagag
gatctggccccccatcctctcaccactggctctcaactcatctctgcgcctgaacccacg
gaggaagacatagagaagaaccccgagttgaagaaattacagatctatggtgcgggccca
aaaatgatgggactcggactggtggcgagagacaaaggtcttaggaagaaagacgaactg
cctcaaaccgttaccatcaaagacagcgagctgcccgctcccagtgtcccgccagttaaa
tctgagccgccagagcccgaagagagacaaaccgatggaagcacgtccagcccacagctg
cctcctcacagtcttacagtaaagatggaagtgaagaaagaagagctgcaggatgagaat
gacaaggatggagataatccagacggatccaaaatgaccatgaggctaaggcgcaacccc
aacaacccgcagtgtgtggattcttatgtctgccggatgtgcggccgtggagacgacgac
gagaaacttcttcagtgtgacggctgtgaggagaattatcactcttactgtttactgccc
ccgctctctgatacccccaaatgcaagtggcgatgcccaaaatgtgttgcagaagagtgc
aagaaaccttcagaggcattcggcttcgaacaagcgacaagagagtacactctgcagagt
ttcggagaaatggcagatgctttcaaagcagattacttcaacatgcctgtccatatggtt
cccccggagctcgtggagagggagttctggaggttagtcagctgcattgaagaagatgtg
acggtcgaatatggagcagacatacactcgaaagagttcggcagtggctttccaatgatg
aacgggaaaaagaaactcacaaaggaagaggagggatatgcccgcagtggctggaacttg
aatgtgatgccagttctggagcagtcgctcctttgccacatcaatggagacatctctggg
atgaaggtgccgtggctttatgtcggcatggtgttttcaaccttctgctggcacatcgag
gatcactggagctactccatcaactacctgcactggggagaacccaagacttggtatggc
gttccctctgtggcagctgagcagcttgaggacgttatgaagaagctgacgccggagctg
tttgagtttcagcctgatctcctgcatcagctggtcaccatcatgaaccccaacatcctc
atggctcacggcgtgccggttgtacgcacaaaccagtgcgccggtgagttcgtcatcacc
ttccccagagcctaccacagtggcttcaatcagggatataactttgcagaagcagtcaac
ttctgcactgcagattggctccctgctggtcgacactgtattgagcactatcggcgtctg
aggaggtactgcgtcttctcccacgaggagctcacctgtaaaatggctgccagtccagag
aaactggatctaaacctggctgcagctactcatcgggagatgttcattattgttcaagag
gagagaaagctgcgcaagaatctgatggaaaggggcattacggaagcagaacgggaggct
tttgagctgctgcctgacgatgagaggcagtgtgataaatgtaagaccacgtgcttcctc
tctgctctggcctgctcaaactgccccgaacgtctcgtgtgtctctatcacactcaggat
ctgtgcaaccaccccactgaaaaactctacctcaggtacagatacaccctggatgagttg
ttagcaatgttacatcggttaaaagtccgatccgagtcttttgattcctgggccaacaga
gttaaagaggcacttgaacaggaagaaggaaacaagatagaaatgtattaccttgagaag
ctaaagattgaagcagcagagaagaagtttcctgacaacgagcttctcaggaagctcaac
tctgttctgaaggacataatgtactgccagcagacaagtactgagctcctctgtaattca
aaaactggggaaggcagaataactttacaagagctgaaatccatggttgataaaatgcaa
aacctgccctgtgtgataaaccagttggaggaagttcaagcggtcctgaagacgatcgag
gagttccaaaaacgagctcaagttctgatcaacaataaggactggaggaaagactcgccg
ccgcccgagcagctgcagtctttgttggaggagggggccaagctgtctgtggtggctcca
gagtgtgatttacttcagggcctgaaggagcaaggccattggctggaagaggtgaggcgt
acacttggcaccgaaggaggggagaagcacgaagtgacgctggatgtgttgaggaaccta
atggaagcaggctgcaacgtacctcagagcgggtctgtggagacggccatggctgagctt
caggagctgctcacgattgctgaacgatgggaggaaaaagcacaaatctgcttagaacag
aggcaaaagcatcctctctccaccctggaagctatagtaaatgaggcccaacttattcca
gtcaagcttcccaacattctggctctgcagagctgtcttgtgcgagctcgggcctgggta
actgacttggaggaaattcagaacggggagcattatccatgtttggacgacctggaaggc
ctggttgctatcggaagggacttgccggtcttcatggaagagttaaggcagctggaactg
caagtggccagtgctcactcctggagggacaaggccaccaagaccttcctgaagaagagc
agccagcacagtctgctggaggtgttatgtccgtgtgcaaaaaggaggaataagcgagtt
gagacggagctgttagaagatgattctgatacaaacacgttggggctttctgctcaggcc
ttgagggaccctgcagctattgtgatggcattcaaagaaggggaacaccaggaaaaagag
gccctgctgaggttacaggaagttaatatgtgcaagtctggactgaacacagcgagttgt
gaggagagcaggcggtgggatgaggccatggagacagacgtgtcaagccattgcgagaac
tctgtaaaagagaatggaaacagtaaccacggccgtcccagccctcctcagtctgtgtgt
gtgtgtgccggacagacgcgtgctcctcagctccgctgccatctctgtaaggactggttc
cacggtggctgcgttcctttcccgtccctgctgccctcctctggaccacccatcagcccg
ctgtgctggtgggactgggacacccgcttcttgtgtcctcagtgccagcggtctcggcgc
ccacggctggagactatcctggctttactcgtagccctgcagaggctgcctgtgcgtctg
cctgaaggagaggctctgcagtgtctcacagagagggccatcacatggcagggccgagcc
aaggaggccctggagacaccagagctgcagcaggcacttcagaagctgcaagaactcaaa
gaaaccctccactatgacgctgaagaagaggaagacgagaaaaaggaggcagaagggaat
tctgttattgttttgtcagactccgagggaggggagggagacgatgatgtcattgaccta
acagaggagtcacctagaaagaaaacaaaggagaccggtgccactcaggctgaatgtcaa
aacggtgtcggcaagaagtcaaatgttacaggcgtgggctctctgctgtccctgctgcct
cgactgaaaggccaagtggtggagctttccccagccaccagggtgcagctgcaggagctg
cagctagagggcgatctgcttgaggtgtctttggatcaaacacaaaccctctacagagtc
ctgcaagctgcctccgacccacccagagaaacactgcacacactcatccagattgagctc
gaagaacagagacggacgagacgagtacggcccaaggagtccaaaaggaagaggaaaggc
caccgaggaggcagtggagaagaggcaggggaaaagtctcatgatgtcttgcagtcaaag
aaaacctgtcctctcaaactcagcccctctgctcacctccctgtcgagacccacactgag
atgttgtga

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