Kryptolebias marmoratus (mangrove rivulus): 108232108
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Entry
108232108 CDS
T05608
Name
(RefSeq) DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
kmr01001
]
108232108
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108232108
Enzymes [BR:
kmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108232108
Protein kinases [BR:
kmr01001
]
Serine/threonine kinases: Other
Other
108232108
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108232108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
ARM_PUB
WD40
ANAPC4_WD40
LisH
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Clathrin-link
Motif
Other DBs
NCBI-GeneID:
108232108
NCBI-ProteinID:
XP_017265186
UniProt:
A0A3Q3B393
LinkDB
All DBs
Position
LG8:13736482..13750660
Genome browser
AA seq
1564 aa
AA seq
DB search
MASASASVDSKAELTALLEQWEKEQQSSTEELVNILTKISELVEKETEEYHKADPDPFDD
RHPGRADPECVLGQLLKILFKNDDFMNTLVNSYVMTSREFSLNAAACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRL
RELQNKDAENKRETKRFSPWKILSQPLLPLDEETVDGGFEDKPFTLSRNGAEKDAMGPQD
AAEVPFSSIEPENELSFRFNSPDKTSSRANSVVKTMMKPMSAPSSLTHPGLSDGSSYLKR
RAERESARTSKQKLNFSLPEPERNFSELSNSSWSEMSPWVIGNNYHLYPLTPEIEQRLIL
QYLTPLGEYQELLAVFMQMGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEF
VAQGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSVLSDVVGYTLWLLEC
SHASGCCHATMFFSISFSFRAVLELFDKQDGLRRLVNLISTLEILNPEDQGALLSDDEIF
SSRQRAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVSYSREQVVEM
MEFLIACGPRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILTV
VPKTQLLLSEPVAVLDEGGTTVSTVGMSIVLAVAEGEVFVNDAEIQKSALQVVINCVCAP
DKLISSIGKFVAGMPRRRLPQQTKANESVLTRMWNVVQSNNGIKVLLSLLTVKMPITDAD
QIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFCKFAAEL
MERISGKPLLIGTDVSLAWLQRASVVAQSKITFPEKELLLLIRNHLVAKGLHDTATTLTK
EADLPMACLSHSSHCSHSTSAFPSVAPPPPASPVATLPRTPRLANSVVSRLGNHPSHSST
PGSSHPQTRPSTSQLAGPSSSSVPPTSVPHCNSGSPLIGRIIFSRERQTACSTVNCKKPR
VLRQKSDHGAFSQSPAMKKQFDRHLPSPPALDSIITEYLREQHARCKNPVATCPPFSLFT
PHQCPEPKQRRQAPINFTSRHSQRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREADEDE
SGFTCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLTS
ASWSYPLSGLWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHVARIYDIQTGQITQT
LNNPDLANSYKRNCATFNPTDDLVLNDGVLWDVRTAQAIHKFDKFNMNISGVFHPNGLEV
IINTEIWDLRTFHLLHTVPALDQCRIVFNNSGTVIYGAMLQADDEDDMMEMQMKSPFGSS
FRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRLAE
EEEEDEEDQEDEDQEEDDDDDDDSDDDVDVDTDPLIAELENENGGEDEDDEDEDDGNDEF
SPSDEEVARLLEDDGDVGEDDDEEDDDDDNDEDDTDNDDVDLDGDNDSSDNSDLEDDIIL
SLNE
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcatctgccagtgtggactcgaaggcagagctgaccgctctgttggaacag
tgggagaaggagcagcaaagcagcacagaggagctggtgaacatcctcaccaaaatctct
gagctggttgaaaaggagacagaggagtaccacaaagctgaccctgacccttttgatgat
cgacatcctgggagagccgatccagaatgtgtgttagggcagctgcttaagatcctgttc
aaaaatgatgatttcatgaacacattggtgaacagctatgtgatgaccagcagagagttt
tctttaaatgcagcagcttgtcgcttgttgcagaacatcatgcccggattggagacagct
gtggtttttcaagaaaaggagggtatagttgaaaggctgtttaagtgggctcaggaggct
gaacagcctctgagaatctatgccaccggcttgttggcgggcgccatggagaaccaggac
attgctgccaactacagagaggagaactctgttctggtgcctttgatgcttcatcggttg
cgtgagcttcagaataaggatgctgagaacaaaagggaaaccaaacggttcagcccctgg
aagatcctgagtcagcctttgttacctttagacgaggagaccgttgatggaggctttgaa
gacaaacccttcacactgagtagaaacggcgccgaaaaggacgcgatggggccacaagac
gccgctgaagttcccttttcgtccatcgaacctgaaaacgagctttcgttccgtttcaac
tcgcccgacaagacgagcagccgtgccaattcagttgttaaaaccatgatgaagcccatg
tccgcccccagttccctgacacacccaggcctttcagacggcagcagttacttaaaaagg
agggcagagagggagagtgccaggacctcgaagcagaagctgaatttctctttgcccgag
ccagagaggaacttcagtgagctttccaacagcagctggtcggagatgagcccctgggtg
attggcaacaattatcatctgtaccctttgaccccagagattgagcagaggctcatcctg
caatatctcacccctctgggggagtatcaggagctcctggcagtgtttatgcaaatggga
gctcgtgagctgctcatgcactacatggatctaaagcagaccaatgatgtgcagctcacc
tttgaggctctcaagtatctggcttcactgctgttgcataagaaatttgctgcagagttt
gttgctcagggaggagttcaaaagttgctggaaatcccgagaccttcgatggctgctact
ggagtgtcactgtgcctgtattacctagcttataaccaggatgccatggaaagggtgtgc
atgttgccccactctgtcttgtcagatgtggttggttacacgctgtggctgctcgaatgt
tcacacgcgtcaggctgctgccacgccaccatgttcttctccatctccttttctttccga
gccgtcctggagcttttcgacaagcaggatgggctccggcggctcgtcaacctgatcagc
acgctggagatcctgaacccggaggaccagggagcgctgctgagtgatgatgagattttc
tccagcaggcagagagccaagcacacctgcatggctctgcgcaggtacttcgaggcccat
ctggcaatcaaggtggagcaggtgaagcaatccctgcagcgcacagaggggggcgccccc
attcactcgcagccatattacaaggctgtcagctatagccgcgagcaggtggtggaaatg
atggagtttctaatagcgtgcggtccgcggctttactgggagccagcagaggtctttcac
aagttgtcttgtgttcagctgctcctgcagctcatttccatcgcctgtgactggaggacc
tactatggcaggagtgatactgtgcgttacgccctcgacatcctgagtatcctcacagtt
gttccaaagacccaactattgttgtctgaacctgttgctgtgctggatgagggaggaact
acggtttctactgttgggatgagtatagtcctggctgtggcggagggagaggtatttgtg
aatgatgccgagattcagaagtcagctctgcaggtcgtcatcaactgcgtttgtgcacca
gataaactcatatccagcatcggcaagtttgtagcggggatgccccgtcgccgcctgccc
cagcagaccaaagccaacgagagcgtgctcactaggatgtggaatgtcgtgcagtccaac
aatggcatcaaggtgctgctatccctgctgactgtgaagatgcctattacagatgcagat
cagatccgagctcttgcctgtaaagctctggtgggtctgtcccgctccagctctgtcaga
cagatcatcagcaagctgccgttgttcagcagcggacacatccagcagctcatgaaggag
cccgtgctccaggacaaacgcagcgaacatgtcaagttctgcaagtttgccgccgagctg
atggaaaggatctcgggcaaaccgttgctgatcggcacagacgtgtctctggcgtggttg
cagagggccagtgtagtcgctcagtccaagatcaccttccctgagaaggagctgctgctg
cttattaggaaccaccttgtggccaaaggcctgcacgacacggcaacgactctcaccaaa
gaagcagatctccccatggcgtgtctgtcccattcgtcgcattgttcacattcgacttct
gcgttcccttctgttgctcctcccccacccgcctccccggtggccacgctgccccgaacc
ccgcggctggccaacagtgttgtgtcgagactcggtaaccatccctctcactcatccacc
ccaggatccagccatccacaaacacgaccctccacatcacaactggccggtccgtcttcc
agttccgtcccaccaacgtctgtcccacactgtaacagtggctctccactgatcgggcgc
atcattttctctcgtgagcgacaaacggcgtgtagtacggtaaactgcaagaaacccaga
gtgcttcgacagaagtctgaccacggggctttcagccagagtcctgcaatgaagaagcag
tttgacagacacttgccttccccgcctgcgttagacagtataattacagaatacctgagg
gaacagcacgcgcgctgcaaaaaccccgtcgcaacatgcccacctttctctcttttcact
ccccaccaatgtcccgagcccaaacagagacgacaagcgcccatcaattttacatcccga
cattcccagagagtcatctacccaaaatacggaggtgttgatggaggatgctttgacaga
catctcattttcagcaggtttcggcccatctccgtgttcagggaggcagacgaggacgag
agcggattcacgtgctgtgccttttctgctcgcgaacggtttctgatgctgggaacgtgc
acggggcagctcaagctctacaacgtgtttacgggccaagaagaagctagctacagctgt
cacagttcagcaatcacccacctggagccctcacgggatggttctctgctcttaacatcc
gcctcttggagttaccccctgtctggactctgggggatgaaatcagttttcatcatgaag
cattcgttcctgggtgaccactacgtggagttcagtaagctgtcacaggaccgagtcatt
gggactaaagaacacgtagcacgtatttatgacatccagacgggtcagatcacccagact
ctcaacaaccctgacttggcaaacagctacaagaggaactgcgccaccttcaacccgaca
gacgacctggttctgaacgacggcgttctgtgggacgtccgcacggctcaggccatccac
aagtttgacaagttcaacatgaacatcagcggtgtcttccatcccaacggcctggaggtc
atcattaacacagagatctgggatctgcggaccttccacctcctccacacggtccccgct
ctggaccagtgcagaatagttttcaacaacagcggcaccgtcatctacggagcaatgttg
caagctgatgatgaagacgacatgatggaaatgcagatgaaaagtccgtttggttcctcg
ttcaggacctttaatgctacagattataaaccaatcgctacaattgatgtgaagaggaat
atatttgacctttgcacagatacaaaagactgctatctggctgtcattgagaaccaagac
tcggtcaacactgacactgtgtgtcggctgtatgaagtgggccggcagagacttgcagag
gaagaggaggaggatgaggaggatcaggaggatgaggatcaggaggaggatgacgatgac
gacgacgattcagacgacgacgtcgacgtcgacaccgatcctctcatcgccgaactggaa
aacgagaacggcggcgaggacgaggacgacgaagacgaggacgacggcaacgacgaattc
tccccctctgacgaggaggtcgcacgccttctcgaggacgatggcgacgttggggaggac
gatgacgaagaggacgatgatgacgacaatgacgaggacgacactgataatgatgacgtc
gatctagatggcgacaatgacagctcggacaactctgaccttgaggatgacatcatctta
tccctgaacgagtga
DBGET
integrated database retrieval system
