Kryptolebias marmoratus (mangrove rivulus): 108232111
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Entry
108232111 CDS
T05608
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b
KO
K13091
RNA-binding protein 23/39
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108232111 (rbm39b)
Spliceosome [BR:
kmr03041
]
Common components
Common spliceosomal components
General mRNP proteins
108232111 (rbm39b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
108232111
NCBI-ProteinID:
XP_017265191
UniProt:
A0A3Q3B188
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All DBs
Position
LG8:13576175..13581894
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AA seq
497 aa
AA seq
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MADDFDVEAMLEAPYRKDENKSSHANGHDEHSKKKRRSRSRSRSPGSRKKKSRSRDRKKS
KKRSKSRERKRSRSRERHRSRSRSKERTGRYKARKSPIRKRSRSRSPFKKEKSPVRQPID
NLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVE
SSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSAGPMRLYVGSLHFNITE
EMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKV
GHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQMTG
SIPFAGIATPAVPTPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPNWANEIQDDVIEE
CNKHGGVVHIYVDKNSPQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHN
LFPDSVTAKQLLMPSRR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgtcgaggccatgctcgaagcgccatacagaaaggatgagaac
aagtcctctcatgcaaatggacacgatgaacacagcaagaagaaacggaggagtcgaagc
aggagccggagtccgggctcaaggaagaagaagagcaggagccgagacaggaagaagagt
aagaagaggagcaagagccgagaaagaaaacgcagccgcagcagagagcgccaccgcagc
cgctcccgaagcaaggagcggaccggacgctacaaagcccgcaagagcccgatccgtaaa
cgttccagaagtcgaagcccttttaaaaaggagaagagtcctgttaggcaaccaatcgac
aatctaactccagaggagagggatgcccgcactgttttctgtatgcaacttgctgcaaga
atcagagctcgagacctggaggatttcttctcagctgttggaaaagtcagggatgtgcgg
atcatctcagacagaaactctcgaaggtcaaagggtatcgcatacatcgagtttgtagag
tcgtcttctgtacctctggcaattggactgaccggccaaaggcttttaggcgtgccgatc
atcgtccaggcctctcaggcagagaaaaatcgagctgcggctgcagccaataatctacag
aagggcagcgccggtcccatgcgactgtacgtgggctcgctgcacttcaacattactgaa
gaaatgctgcgagggatctttgagccttttggaaagattgaagggatccagctcatgatg
gacagcgagaccgggagatccaaaggttatgggttcatatcgtttgcagatgcggaatgt
gcgaagaaggcgttggagcagctgaacggctttgagctggccggacgtcccatgaaggtg
gggcacgtcacagaacgctctgactcctcgacggcgagctcgttcctggacaacgatgaa
ctggagagaactggcatcgacctcggtacaacagggcgcctgcagcttatggctcgacta
gcagaaggaacaggcctgaagatccctcctgctgctcagcaggctctacagatgacaggg
tccattccctttgcgggcatagctacaccagcagttccaactccagctccaagccaagct
ttgaacctcccatcacagccgctggccacacactgccttcaactgtccaacctcttcaac
ccacaagcagaaaatgatccgaactgggccaacgaaattcaagatgatgtgatcgaggag
tgcaacaagcacggaggagttgttcacatctacgttgacaagaactctcctcagggtaac
gtgtatgtgaagtgtccctcaataccggctgcaatggcgactgtaaacgcacttcacgga
cgctggttcgcaggtaaaatgataacagctgcatatgttcctttaccaacctaccacaac
cttttccccgattcagtaacagcaaagcagcttctaatgccttcacgtcgatag
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integrated database retrieval system
