Kryptolebias marmoratus (mangrove rivulus): 108232181
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Entry
108232181 CDS
T05608
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108232181 (irx2a)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108232181 (irx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
108232181
NCBI-ProteinID:
XP_017265287
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All DBs
Position
LG16:complement(18192484..18199205)
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AA seq
535 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRNDELARSSSGSAFSPYPGSAAFSASAAG
AGFSSPLPYTADPSAGFPPYMASPYDAHTTGMAGALSYPGAYGSPGYPFQLNDPAYRKNA
TRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWA
PRSKSEDEDEEDADGERKEEVERSDKTLDNSEASAEDEGLNVFQLSNLVSGISLHVDTLT
DHSCSADSDGEKVSCAAELSSDQTDDMCSQDGAERRPQLSPKPVTSSPLTGVEAPVFGHL
HHPHHHHHHLHPLHHLHSQREDLARSIANSSSINTNKLSPCLDGRPSSGATQSNPTVKPK
LWSLAEIATSDQKQQHQQQGPPSGPSSSPPSSSSSSSSSGRLLTPPSSSTSPAATSPSLY
AAPHSILGRPIYYTSPFYSNYTNYGNFSPLQGQGILRYTNSSGVSLAAAAAAAAAAAAAA
NEGLSSSHRAAEASTNPKHRPDSPLVKNNPNQIAVVEQQQQQHFRSANLEAKKGT
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctctggctctttattcgtgt
ccggcttacggggcctcggctctggctgctccacggaatgacgagttggcgaggtcgtcc
tctggctcagccttcagcccgtaccccggctcggctgctttctccgcctcggctgctggt
gcaggcttctcgagtccactgccatacaccgctgatccttccgcgggattcccaccctac
atggcttctccatatgacgcgcacacgacggggatggccggtgcgctcagttaccccggc
gcgtacgggagtccgggttaccccttccagctcaacgacccggcttaccgcaagaacgcc
accagggacgccacggccaccctgaaggcctggctgcaggagcacaggaagaacccgtac
ccgaccaagggggagaagatcatgctggccatcatcaccaagatgaccctgacgcaggtc
tccacctggttcgccaacgccaggaggaggctcaagaaggagaacaagatgacgtgggcg
cccaggagcaagagcgaggacgaggacgaggaggacgcggacggggagaggaaggaggag
gtggagcgctctgacaagaccctggataacagcgaggcttcggcggaggatgaaggccta
aatgtattccaactttctaatcttgtctcaggcatcagcttgcacgtggacaccctgact
gaccactcgtgctcggcggactcggacggggagaaggtcagctgcgcggctgagctcagc
tccgaccaaacggacgacatgtgctcccaggacggcgcggagcggcggcctcagctgtcg
cccaaacccgtcacgtcgtcgcctctgacgggcgtggaagctccagtgttcggccatctc
caccaccctcaccaccaccaccaccacctccatccgctccaccacctccacagccagcgg
gaggatttagcccgaagcatcgcaaatagcagcagtataaacaccaataaattgtcccca
tgcctcgacggcaggccttcatctggggccactcagtcaaaccccacagtcaaacctaaa
ctgtggtctctggcggagattgctacctcggaccaaaagcagcaacatcagcaacagggg
ccacccagcggcccctcctcctcccccccctcctcttcctcctcctcctcctccagcggc
agactcctcactcccccttcttcctcgacctccccggccgccacgtccccctccctgtac
gcggctccccactccatccttggaagacctatttattacacttctcccttttatagcaat
tacacaaactatggcaacttcagccccctgcagggccaaggcatcctgcggtacactaac
tcatccggagtgagtctcgctgcagccgccgccgccgccgcggccgcggctgccgctgcg
aacgaggggctcagctcctctcacagggctgcggaggccagcacaaaccccaaacacagg
cctgactcccccctcgttaaaaataacccgaaccagattgctgttgtcgaacagcagcag
cagcagcattttagatccgctaatttagaagcaaaaaaaggtacgtaa
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