Kryptolebias marmoratus (mangrove rivulus): 108232200
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Entry
108232200 CDS
T05608
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108232200 (irx1a)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108232200 (irx1a)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Methyltransf_36
MRP-S32
Motif
Other DBs
NCBI-GeneID:
108232200
NCBI-ProteinID:
XP_017265313
UniProt:
A0A3Q3BBX8
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Position
LG16:18340406..18345028
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AA seq
490 aa
AA seq
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MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGSTEIGGSPTATAAAVTSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKDSPGVHPATFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGNRSKEDGEDGHLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEEDDDKCTEG
SRDHRVGVGAPGELDSLEKRRAFALQAHEAFEKSKSAITAHPSGKENSDGNNNKRVLSPD
RPGGFPLPSNNKPKIWSLAETATSPDSSTQKPTSPCGPGATTHPSAPHHQIQTHPAFLPS
HGLYTCQIGKFPNWTNGAFLGQNSLLNVRSFLGVNQHHHHHHLSSQQQQQQQSASVVVSP
GAALSNDSKAPAETPSPKHIEHENGVRCDSPPTQTLKSSFRPIHDRSSLPSSARSPQDAT
QRVLTALPSA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagttaggctacccacagtacctcagtgcctcccaggcggtgtacggg
agcgagaggccgggggtgctcacgccgtcgtcccggggagggagcaccgagatcggaggg
agtccgaccgccactgcggcggccgtcacctcggtgctgggcatgtacgccaacccgtac
gcacacaactacagcgcattcttaccgtacaccagcgcggacctcgctctgttctcacaa
atggggtcccagtacgagctgaaggacagtcctggtgtccatccggccaccttcgcagcc
cacacgtctcccgccttctacccgtacggccagttccagtacggagaccccgccagaccc
aagaacgccacccgggagagcaccagcaccctgaaggcctggctcaacgagcacaggaag
aacccgtaccccaccaagggcgagaagatcatgctggccatcatcaccaagatgacgctg
acgcaggtctccacctggttcgccaacgccaggaggaggctcaagaaggagaacaaagtg
acgtgggggaacaggagcaaggaggacggggaggacggccacctgtttggcagcggggac
gaagcggagaagaacgaagacgaggaggaaattgacttggagagcatagacatagacaaa
atagacgacaacgacggggatcagagcaatgaggaggatgacgacaaatgcacggagggg
agcagggaccacagggtgggagtcggggcgcccggggagttggacagcttggagaaacga
cgggcctttgccttgcaggcccacgaggcctttgagaaatctaagagcgcaattacagct
cacccgagcgggaaggagaactcggacggcaacaacaacaagagggttttatccccggac
agaccggggggcttccccctcccgtccaacaataaacccaaaatatggtctttagcagag
accgccacgagtcctgacagctcaacccagaaacccacgtccccctgcggcccgggggcc
accactcacccgtcagcaccccaccaccagatccagacgcacccggccttcctcccgagt
catggactgtacacgtgccagattggaaagttccccaactggacaaatggggctttcctg
ggccagaactctctgctgaatgtcaggtcgtttctgggagtaaatcagcaccaccatcat
catcacttatcctcccagcagcagcagcagcagcagtccgcgtcggtggttgtgtctccg
ggagcagcgctcagcaacgacagcaaggccccagcagagacccccagtcccaaacacata
gagcatgaaaacggagtaagatgtgattcacctccgacacagaccctgaagtcgtctttt
cgtcccattcatgacagatcctctctgccttccagcgccaggagtccccaagacgccacg
caacgggtcctaactgctctcccctcggcttga
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