Kryptolebias marmoratus (mangrove rivulus): 108232226
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Entry
108232226 CDS
T05608
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108232226 (irx4a)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108232226 (irx4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
108232226
NCBI-ProteinID:
XP_017265345
UniProt:
A0A3Q3BA38
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Position
LG16:complement(18056008..18063128)
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AA seq
484 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSIADSGVAASGQTPVYCPVYESRLLATA
RHELSSAAALGVYGSPYTGGQGYGNYVTYGTEASAFYSLGTFDTKDATASAHAGITQATA
YYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDDDEDGSQEEQIKSENNDDET
RSRADKDLQLSDLEDFDALESESSECELKHRYHMNTHMSTDCSAGQLIKSASLKLSLPVS
LGGAEQDLGKSCLKSNPEDFQADSRQQQAKSCYNNNNNTQQQQQHQLLDGKPRIWSLAQT
ATSLNQTEYPSCMLRCQPPPPPPSSSSLTPSPAASSPVTGPDSSRQQDSPVTTLRNWVDG
VFHDPLFRHSSGLSQALSSSNNSNTVPWTTNTKGAMLEAAGLQQHQDPPKDMSFPKTVNK
LFCS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatacccatattcgtctgctccacagttcctgatgaccacc
aactctctgaccacttgctgcgagtccacgggcagatccatcgccgactccggagttgca
gcgtccgggcaaacaccagtctactgtccggtgtatgagagccggctgctggccacggcg
aggcacgagctcagttcagccgccgcgctgggcgtgtatgggagcccctacaccggtggt
cagggctatgggaattacgttacatacggcaccgaagcgtcggctttttactcgctgggg
acatttgacactaaagatgccacagcttctgcgcatgcgggaatcactcaagcaactgcc
tattacccctatgatcctaccttgggacagtatcagtatgacagatatggctctatggac
gggggcactaggcgaaagaacgccacccgcgagaccaccagcaccctgaaggcctggctg
caggagcacaggaagaacccgtaccccaccaagggcgagaagatcatgctggccatcatc
accaaaatgacgctgacgcaggtctccacctggttcgccaacgccaggaggaggctcaag
aaggagaacaagatgacgtggccgcccaggaacaaggggtcagaggagaaaagatacgac
gatgatgaggatgggtctcaggaggagcaaataaaaagcgagaataatgatgatgagacc
agaagtcgggcggataaggacctccagttgagcgacttggaggacttcgacgcgctggag
tccgagagctccgagtgtgagctgaagcatcgctaccacatgaacacgcacatgtcgacc
gactgctccgccgggcagctcatcaagagcgcctctctgaagctctccctccccgtttct
ctcggaggggccgagcaagacttgggcaaaagttgtctcaagtcgaacccggaggacttc
caggcggacagcaggcagcagcaggccaagtcgtgctacaataataataataatacccag
cagcagcagcagcaccagctgttggacggaaagcctcggatctggagtttggcccagacc
gccacgtccctgaaccagactgaatacccgtcctgcatgctgaggtgccagcctccgccg
cctccgccctcctcatcctccctcaccccgtcccccgccgcctcctcccccgtgaccggc
ccggacagcagcagacagcaggactcgccggtcacgacgctgaggaactgggtggacggg
gttttccacgaccccctgttcaggcacagctccggtctgagccaggctctgagcagcagc
aacaacagcaacaccgtgccctggaccacgaacaccaaaggcgccatgctggaggcggcg
ggcctgcaacagcatcaggacccccccaaagacatgagctttccaaaaactgtcaacaaa
ctgttctgctcctaa
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