Kryptolebias marmoratus (mangrove rivulus): 108232229
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Entry
108232229 CDS
T05608
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
kmr00535
]
108232229 (col14a1a)
Proteoglycans [BR:
kmr00535
]
Extracellular matrix (ECM) proteoglycans
Others
108232229 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
108232229
NCBI-ProteinID:
XP_037836068
LinkDB
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Position
LG16:16558715..16689027
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AA seq
1867 aa
AA seq
DB search
MSSTGEVRWRLWAPLAVLALFSCYPSKAQGQVSAPRRLRFKVQSPSKLLVSWREPKGDVD
SYLFFYNSIPGGQQKEVIVSKSETNVLITDYKPSKEYVFSVVAVRGREQSRPLQGRFKAH
KAERGDGRDKTDPHRLTDSDGPPEDANEISGADQFVCHTEAIADIVILVDGSWSIGRINF
KLVRMFLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNTYSTKDAVIDAVKNLPYKGGN
TLTGLALNFISENCFKLESGSRVGVPKIGILITDGKSQDDVIPPAESLREAGVELFAIGV
KNADENELRSIASEPEDTHVYNVADFNVMSSIVEGLTKRVCKQVEQQDKDIKQKEKTGMP
LNLETSEVTARSFRISWSPAPGNVGKYRVVYYPVQGEVQEAVVAGSETSVVLQHLSSLTE
YQLAVYAVYANEASEALRGSETTLGLPSVTSLQLFDMTQSTMKARWNRVDGVSGYLLLYT
PLAEDGDLDRKEINVPDAVTELELDGLKPDTEYTVTVYSMYGEEVGDPVTSQETTLPLNP
PKNLQFSDITHNSAHISWDQATGGVKGYRIKWVMTDGQVTKEVDVGPVSSYDLSELTSLM
EYSVAIFALYNEGQSEPLNDGFTTTPVPGPLNLRSSDVGTDRFGVSWDHSAEDIVLYRLS
WAPFAGGDTKEVILSGSENGYILSDLSPSTEYEVMLTAIFTDESESDTVSVIETTLAKMT
AAPVERKAVKNLYLSDETTQSLDASWELDDPNVASYRVSFVGLSENQKEESVSVGGGQKQ
VLLQPLQPDTQYKVTVTPVYRDGQDGISASALGSTLPLLSPENLRVSEESYNHFRVSWDP
PRSPTEGYRIVYQPIYVQGPVLETTVGEDVNSVLLLNLLSGTEYNVQVTSSYPAGQSEPL
LVNGKTLFLGVSGLSTYQVRSNSMCVQWQPLLHATTYRVSIQSSLNGQKQEVNLGGAASR
QCFYDLTPSSQYQISVYTQTQEVEGPSVSITDMTLAAPTQGPTEPPTTEPPPTIPPAKEV
CKEAKADLVFLVDGSWSIGDDNFMKIIRFLYSTMGSLDLIGPDGTQVAIAQFSDDARTEF
PLSSHSNKEALLEAIQKISYKGGNTKTGRAIKHVKESIFTQAAGARRGVPKVLVVLTDGR
SQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAVKKIEEQL
ITFVCEAATATCPSVLMSGNTMAGFRMMEKFGLVEKEYSTIPGVSLEPGSFNSYPCYRLH
RDALVLQPTRYLHPEGLPSDYTISMMLRLLPETPQEPFALWEILNKSNEPLVGLILDNSG
KTLAFFNYDYRGDFQTVTFEGSEIKKLFHGSFHKLHVTVSKTSVKVVLDCSVVGEKPISA
SGNITTDGVEVLGRMVRSRDKRDSSVPFQLQMFDIICSTSWGSRDKCCELPALRVEEQCP
PMPHACTCSQDSKGPPGPSGPPGGPGIRGARGDRGDPGVTGPQGPMGEIGPPGPSGPPGP
QGPNGLSIQGPPGARGEKGEKGEIGPAGPMGVPGSPGSPGRDGPPGLRGQLGNSGPQGRQ
GPPGPVGAPGAPGAPGPGGSTGSPGDQGLPGPAGTKGDKGERGEVMSHSAVRAIARQVCE
QLIQNYLSRYNAILNQIPQSSASVRTVPGPPGEPGRRGSPGPQGEAGPPGRPGFPGANGQ
NGQPGERGPSGEKGDRGSPGIGKQGPRGPPGPPGLPGEGRAGSQGPPGRPGNPGTAGRPG
NPGGTGPAGPPGYCDQNSCLGYNVGVQPLPHSDYQPYNPPYREQHNPAAVAYDNQGGGEE
DQEEEQDPYYRGYPSQLAYGHRGYHPSHSEDVELRSPGVARRYSRDVIPEESKEGGPKKK
GGLTLSA
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgacaggagaggtcaggtggcgtttgtgggctccgctggcggtgctggccctt
ttttcctgttatcccagtaaggctcagggtcaggtttcagctccacggaggctgcgtttt
aaagtgcagagtcccagcaaactccttgtctcatggagggagcccaaaggagacgttgac
agctatttatttttctacaacagcataccaggtggtcaacagaaggaggtcatagtgtct
aaatctgaaactaatgtgttgataacggactacaaaccttcgaaggaatatgttttcagt
gttgttgctgttcgaggcagagagcagagcagaccactacagggcagatttaaagctcat
aaagctgaaagaggggatggacgggacaagacggatccccataggctgacggactcagat
ggacctcctgaggatgccaacgagatctctggagctgaccagtttgtgtgccacactgag
gccattgcagacattgtgatcctggtggacggctcctggagcatcggtcggatcaacttc
aaactggtccggatgtttttggaaaatctggtcaatgcttttgatgttggcatcgataag
acaagaataggtctggcccagtacagcggggatcccaggatagaatggcatcttaatact
tactccactaaggatgcagtcattgatgcagtcaagaatctgccctacaaaggaggaaac
actctcacaggccttgcgttgaattttatatctgagaactgtttcaaactggaatctggc
tcacgggtcggtgtgccaaagattgggatcctcatcacagatggaaaatcccaggatgat
gtaataccaccagcagaaagcctgcgggaggctggtgttgagctgtttgctatcggtgta
aagaatgctgatgagaatgagctgcgctccatcgcctcagagccagaggacacgcacgtc
tacaacgtggctgactttaacgttatgagctcgatagtcgagggactgacgaaaagagtg
tgtaaacaagtggagcagcaagacaaagacatcaagcagaaagagaaaacaggaatgcca
cttaacctggagacgtcggaggtcaccgcccgaagctttcgaatctcttggagtcctgcg
cctggaaacgtaggaaaatacagggtggtttattatcccgttcaaggagaagtacaagag
gctgtagtggccggcagcgagacttcggtggtgttacagcacctcagctctctgactgag
taccagctcgctgtatatgctgtgtacgcaaatgaggcaagtgaagctctgagaggatca
gaaacaaccttgggtctcccatcagtgaccagcctccagctgtttgatatgactcaaagc
accatgaaagccagatggaaccgagtggatggagtctcagggtacctgctgctgtacacc
cctcttgcagaagatggggacttggataggaaggagatcaatgttcctgatgcagtgaca
gaactggagctggacggcttgaagcccgacacagagtacaccgtcacggtttattccatg
tacggagaagaggtcggtgaccccgttacaagtcaggagaccacattaccactgaatcct
cccaagaacctccagttttctgacatcactcacaactctgctcacatcagctgggaccaa
gcgaccggtggagttaaaggttatcgcatcaagtgggtcatgacagatgggcaggtcaca
aaggaggtggatgtgggtccagtgagttcctatgacctcagcgagctgacgtccctgatg
gagtactctgtggccatcttcgccctgtacaacgagggccagtcagagccgctcaacgac
ggcttcactaccactccagtgcccggtcctttaaacctgcgctccagtgacgttggcaca
gacagatttggggtcagctgggatcactcggctgaggacatcgttctctacagactctcc
tgggctccattcgctggtggcgacacaaaggaggtgattttgagcggcagtgaaaacgga
tacatcctctcagatctcagtccgtctactgaatacgaggtcatgctgacggccatattt
acggatgaatctgagagcgacaccgtctctgtcatagagaccacattggccaagatgacg
gcagctccagtagagcgtaaagctgtgaaaaacctttacttgagcgatgagaccacacag
agcttggatgcatcgtgggagctggatgaccccaacgtggcgagctacagggtttccttc
gtcggcctcagcgagaaccaaaaggaggagtctgtatcagtgggtggtggtcagaaacaa
gtgttgctgcagcctttacaaccagacacccagtacaaagtgacggtcacacctgtgtac
agagatggacaggacggcataagtgcttctgctctgggctccacgctgcccctcttgtcg
ccagaaaatcttcgtgtatcagaggagtcgtacaaccacttcagggtctcctgggatcct
cctcggtctcctactgagggttacaggattgtttaccagcctatctatgttcaaggtcct
gttttggagacaacagttggtgaagatgtgaactccgttctcctcctcaacctgctgagt
gggacagagtataatgtccaagtgacgtcttcctaccctgcaggacagagcgagccgctg
ctagtaaatgggaaaacattgttccttggtgtctccggcttgtcgacctaccaggtgcgt
tcgaacagcatgtgtgttcagtggcagcctcttctacatgcaaccacgtacagagtctcc
atccagtcttcactcaatggtcagaagcaggaagtgaacctgggcggtgcagcttcccga
caatgtttctatgacctcactcccagcagccaataccagatcagcgtttacacacagacc
caagaagtggagggaccatctgtatccattactgacatgacactggcagcgcccactcag
ggtccaaccgaaccccccaccacagagccccctcccaccatcccaccggctaaagaagtg
tgtaaggaggccaaggctgacctggtgttcctggttgatggctcctggtccatcggagat
gacaacttcatgaagatcatccgttttctctacagcaccatggggtcattggatctgatt
ggaccagatggcactcaggtggccattgctcagttcagtgacgatgcacggacagaattc
ccactgagttcccatagcaacaaggaagcgctgctggaagccattcagaagatcagctac
aagggaggaaacaccaagacaggtcgagccattaaacatgtgaaggaatccattttcact
caggctgcaggagccagaagaggcgttccaaaggtcctggttgttctgactgatgggcgt
tcacaagacgatgtcaacaaagtctcaaaggagatgcaaatggaaggctacatcatcttt
gcaatcggctttgcggatgcagactacggcgagctggtgaatattgccagtaaacccagt
gaccggcacgtgttttttgtggatgatctggatgctgtgaagaaaatcgaagagcagctc
atcacctttgtttgcgaggctgccactgccacgtgtccgtctgtgttgatgagcggtaac
acgatggcaggtttccgaatgatggagaagttcggcctggtggagaaggagtacagcacc
atacccggagtttctctggagcctggttcctttaacagctacccctgttacaggctacac
cgtgatgctctggtgttacagcccacaaggtaccttcatcctgaaggcttaccgtctgac
tacaccatttctatgatgctccgtttactccccgagaccccacaggaaccctttgcattg
tgggaaatcctcaacaaaagcaacgagccgttggtgggactaattcttgacaactctgga
aagacgttggccttcttcaactacgactacagaggagacttccaaacggttaccttcgaa
ggatcagaaattaaaaagctcttccacggcagcttccacaagcttcatgtaaccgtcagc
aagacgtcagtgaaggtggtgctggactgttctgtggtgggagagaaaccaatcagtgca
tccgggaacatcaccacagatggagtggaggtcctcggacgaatggttcggtcccgagac
aagagggacagctctgttccgttccagctgcagatgtttgacatcatctgcagcacatcc
tggggcagcagagacaagtgctgcgagttgccagcgttgagagttgaagagcagtgccct
cccatgcctcatgcctgcacctgctcccaggacagcaaaggacctccgggaccctccgga
ccccctggaggaccgggcataagaggagccagaggagacagaggggacccaggagtgacg
ggacctcaagggcctatgggggaaattggcccacctggaccttcaggacctcctggtcct
cagggacccaatggactctccattcagggaccccccggagctcgtggggagaaaggggag
aaaggagagatcggaccggctggaccaatgggtgttcctggaagtcccggctcaccaggc
agagatggcccaccaggactcaggggtcagctgggtaacagtggaccacaaggacggcag
ggacccccgggacctgttggagccccaggtgctccaggtgctccaggaccaggtggatcc
acagggtctccaggagatcaaggacttcctggcccagctggtactaaaggagataaagga
gaaagaggtgaggtgatgtcccattctgcggtgagggcgattgcacgacaagtgtgtgag
cagctcatccagaattatttgtctcgctataacgccatcttgaaccagatcccccagtcg
tcagcatcagtcagaacagtacccggaccgcctggggagccgggtaggagaggttctcct
ggtcctcagggagaggcgggcccacctggcaggcccggtttccccggtgccaacggccag
aacggccaaccgggtgaaagaggtccatcaggagagaagggagacagagggagtccaggc
attgggaaacaaggtcctcgaggaccacccggtcctcctggtttgccaggtgagggacgg
gcaggcagccaaggcccacctggtcggcccggtaacccaggtacagcagggaggcccggt
aatccaggaggcacgggacctgctggcccaccaggatactgtgatcagaactcatgcctg
ggctacaacgttggtgtccaacccctccctcacagcgactaccagccctacaatcctccc
taccgagagcagcacaaccccgctgcggtcgcttacgacaaccaagggggaggtgaggag
gaccaggaggaagagcaggacccctactaccgtggttacccctctcagttggcttatggt
caccgtggttaccacccaagccactctgaggacgtggagctgaggtcgccgggtgtggcc
aggaggtattcacgtgacgtcatcccggaggagagcaaggaaggaggaccgaagaagaag
ggcggactcaccttaagtgcttga
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