Kryptolebias marmoratus (mangrove rivulus): 108232258
Help
Entry
108232258 CDS
T05608
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108232258 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108232258 (usp38)
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108232258 (usp38)
Peptidases and inhibitors [BR:
kmr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108232258 (usp38)
Ubiquitin system [BR:
kmr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108232258 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
108232258
NCBI-ProteinID:
XP_017265813
UniProt:
A0A3Q2ZMP4
LinkDB
All DBs
Position
LG3:complement(13783957..13793677)
Genome browser
AA seq
1025 aa
AA seq
DB search
MDKILEGLVSSDHSVPVKRAIVKKVVEAAEKEVTEEQCRALFTLTTRLILLGEDAFQKQI
GLQVLEAYARYHRPEFERFFNKDFALGLLQQGYGQLDHRDPAIIDYIHCCLRLLISCPSV
LEIFSVIQVEVLRMVCERPEPALCAHLCTLLSDFMQCIPRDKSGILFCQQLVRTISCFQC
FASHERELREYVGQVTKVSTLLQNVWKADPTTLLPSLQEVFAIISSTDPSFEPSISLASL
VQHIPVQMITVLIKSLTTDQNVRDGSMTKALCRMIDWLSWPLAQHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWYPIVRQGALAVLSHMLLSFQHSPEAFHLVVPHVVDLVE
SLKTDGLPSSKAILLQFTELMHCMMYQYSGFPDLYDHILEAIKDLPKPSEEKIKLVLNQS
AWTSQSNSFASGVLRQAGKSETGKTGLINLGNTCFMNSIIQTLFMATDFRRHVLSLHVNG
SNTLMKKLQLLFAFLAHTQRAAYAPRTFLEASRPPWFNMGSQQDCSEYLRFLLDRLHEEE
KTLQVLESAQPKVVSLLDTSGKDPAGPTSSEEHEESHLALAESKAADDQRTLIERMFGGK
LITGIRCMQCNCISEKEEPFTDLSLAFCPSASSQNSPKSQGPSEEPKVLCQGSVNGGSEA
PEPGSASSLPTNIQYEPVTNEPPLSVPDLVNYFLAPEILDEDNAYFCEKCGSLQRAERTL
KVVSSPEYLILTLLRFSYDAKCHIRRKILDNVTIPPALRLPVHAPSMPAQWSAAAASIPL
QVDSPESSENLAKKLKPSQGDEEEEARARIDDAEERCRAEEMPVQSVPYLLSSVVVHSGI
SSESGHYYSYGRNISGADGAQHPASHSPVREDLATCSLCTPEQGDAQTSGGQEAREWLLF
NDSRVTFTSLQSAQNITKRFPKDTAYVLMYRKQEQNLNGGVTANGMRMSAEPPLQKELLD
AIIKDNKLYLQEQELSARTQALQASSSSCSFRPNGSDDNNPPGSCGPSGGGGGGGGFNTI
SRLVF
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattttggagggccttgtcagctccgatcactcagttccagtaaagagagcc
atcgtgaagaaggtcgtggaggcggcagagaaagaggtgacagaggagcagtgccgagcg
ctgttcacgctcaccacccgcctcattttgcttggtgaagacgctttccagaaacagatt
ggcctccaggttctcgaggcctacgcacgctaccaccggccagagttcgagcgtttcttc
aataaagactttgctctcggtttgctccagcagggctatgggcagctggaccatagagac
ccggctataatagactacattcactgctgcctgcggctgctcatcagctgcccctctgtg
ctggagattttcagcgtgatccaagtggaggttttgaggatggtgtgtgagcgtccggag
cctgctctctgcgcccatctgtgcactctgctgtcagacttcatgcagtgcatcccgagg
gataagtcgggcattttgttctgccagcagctggttcggaccatcagttgcttccagtgc
tttgccagccatgagcgagaactgagggagtatgtgggccaggtgacaaaggttagcaca
ctactgcagaacgtctggaaggctgacccaaccactctgttgccctcgctgcaggaagtc
tttgctatcatctcctccacagacccatcctttgagccatccatttcactggccagtctg
gtccagcacatccctgtccagatgatcacggttctcatcaagagtctcaccacagaccag
aacgtccgagatggaagcatgactaaagctctctgcagaatgattgactggctgtcttgg
cctttggcccaacatgttgatacctgggtcatcgctctgctgaaaggactggctgccgtt
cagaagttcaccatcctcatagatgtcacgctgcttaaaattgagctggttttcaatcgt
ttgtggtaccccattgtgaggcagggggcacttgcagtgctttcccacatgctgctgagt
ttccagcactctcctgaggccttccatttggtcgttccacatgtagtggatctcgttgag
tctctgaaaacagatggtctccccagcagtaaagctattttgctgcagttcactgagctc
atgcactgcatgatgtatcagtactctggcttccctgacctctatgaccacatattagaa
gctatcaaggatctcccaaaaccttcagaagagaagataaagttggtgttgaatcaaagt
gcctggacgtctcagtctaattcatttgcttctggtgttttgaggcaagctgggaagtct
gagacaggcaagacgggtctgatcaaccttgggaacacctgtttcatgaacagcatcatt
cagaccctcttcatggccacagattttaggaggcatgttttatccttacatgtaaatggc
tccaacactctaatgaaaaagcttcagctcctctttgctttccttgctcacacacagagg
gcagcatacgcccccagaaccttcttggaagcgtctcgtcctccctggttcaacatgggc
tctcagcaggattgttctgaatatctcagatttcttttagacaggttgcacgaagaggag
aaaacacttcaggttctggaatctgctcagccaaaagtcgtatccttgcttgacacgagc
ggcaaagacccagcgggcccgacttcctccgaggaacacgaggagtcacatttggctcta
gcagaatctaaagctgccgatgatcaaaggactttaatagaaaggatgttcggtggaaag
ctgataacgggcattcgctgcatgcagtgcaactgtatctctgagaaagaagagcctttt
acagacttatctttggccttttgtccgtctgcctcctctcagaacagtcctaaatcccag
gggccctcagaggagcccaaggttctttgtcagggatctgtcaatggtggcagtgaagct
cccgagccaggctcggccagctctctgcctactaacattcaatatgagccagtgacaaat
gagcctcctctctctgtgcctgacctggtgaactattttctggctccagagatcctcgat
gaagacaatgcgtacttctgtgagaagtgtggctccctccagagggcagagaggaccctg
aaagtggtttcttcacccgagtacttaatccttacgctgctgcgattctcctatgacgcc
aaatgccatatccgtaggaagattctagacaacgtcaccatcccgcctgccttgagactt
cccgttcatgccccttcgatgcctgcacagtggtccgccgctgccgcctccatcccgctg
caagttgactctcccgaaagcagcgagaatctggccaagaagcttaagccgtcgcaggga
gacgaggaggaagaggcgagggcgaggatcgacgacgcggaggagagatgcagggccgaa
gagatgccggttcagtctgtgccctatttgctcagctcagtggtggtgcattctgggata
tcatccgagagcggccactactactcgtacggccggaacatcagcggcgcagacggggcc
cagcacccagccagtcactcgcctgtcagagaggatctggccacttgtagcctctgcaca
cctgaacaaggtgacgctcaaacctccggtggccaggaggcaagagagtggctgctgttc
aatgacagcagggtgacgttcacctctttgcagtcggcgcagaacattacgaaacgcttc
cccaaggacacggcttacgtgctcatgtacaggaaacaggagcagaacttgaacggggga
gtgacggcaaatgggatgagaatgagtgctgagccacctctgcagaaagaactactggat
gctattatcaaagacaacaagctgtatttacaggagcaggagctgagcgcccgcacccag
gctctccaggcctcctcgtcctcctgctcgttcaggcccaacggttcggatgacaacaac
ccgcccgggagctgcggcccatctggtgggggcggaggaggagggggcttcaacaccatc
agtagactggtgttctga
DBGET
integrated database retrieval system
