Kryptolebias marmoratus (mangrove rivulus): 108232287
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Entry
108232287 CDS
T05608
Name
(RefSeq) protein SOGA3
KO
K27704
microtubule cross-linking factor
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108232287
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108232287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
ATG16
YabA
TSC22
bZIP_1
Halo_GVPC
TolA_bind_tri
Deam_C
DUF4763
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
108232287
NCBI-ProteinID:
XP_017265449
LinkDB
All DBs
Position
LG16:20015840..20027329
Genome browser
AA seq
841 aa
AA seq
DB search
MMNPASADSSRQSDNSGSRKQQQQRSSSPAGLKETGAKAAQKGSSSAKTKPASGGGGGGG
GRSSRGHSPVSTGRERQGGRGAAAVQPAGAESPPLSRAAAAPQPPDDSPRPVAADASSSS
PSRADPSRVVSDQPCASKSPKLRSKKPRREEEQQQQAAASKKSSRSTVGCGPGFWKEGCL
QTELIQFHLNKSLGKKGTKMQAKSASPPASEPELSPEPDSPQRAPHPDHKLQEEIERLED
ENDDLKTEIEEMRAEMDEMRDTFYEEDACQLQDMRRELERANKNCRILQYRLKKAERKRL
RFTESGQVDGELLRSMEQDLKVAKDVSVRLHHELENVEEKRTKTEEENEKLRQKLIEVEV
TKQALQNELDKAKELSLKRKGSKEGQKPEKKIPQTPVEEENEDLKCQLAFIKEEAILMRK
KMAKIDKEKDRLEQELQKYRSFYGDVDSPLPKGEAGGPPTTRESELKLRLRLVEEEANIL
GRKIVELEVENRGLKAELDDMREDSLAAAGVDSSSSGGQQSREQGEALSELRQQLQLVED
EAELLRRNLADVEEENKKVTTELNKLKYKAGSHEAGSRHGGGGGDPAKVEALQEELKAAR
LQINELSGKVMQLQYENRVLLSNMQRYDLASHLGIRGSPRDSDAESDGGRDDDTPSAASP
RLLPPHRKREGPIGGESDSDEVRNIRCLTPTRSLYSPVDSRFLSRSLRDRQQMIDIRIEA
ERLGRTIDRLIADTSTIITEARVYVTNGELFARLDEDEEGGRIREHELLYRINAQMKAFR
KELQSFIDRLDVPKQEDKQGEEPLSMFQPIILLILILVLFSSLSYATIFKLVFLFTLFFV
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacccagcttcagccgactcgtctcggcagtcagacaatagcggcagccgcaag
cagcagcagcagcgatcctcgtccccggcaggtctcaaagaaacaggagctaaagctgct
cagaagggcagcagttccgctaaaactaagccagcatcaggaggaggaggaggaggagga
gggagaagcagccgaggtcattctcctgtttccacaggcagggagcggcagggcggcaga
ggcgcggctgctgtccagcccgctggtgctgaaagcccgccgctgagcagggccgcggcc
gccccgcagcctccggacgactccccgcgccccgtcgccgcggacgcctcctcctcgtcg
ccctccagagccgacccgagccgcgtcgtctccgaccagccgtgcgcctccaaatccccg
aaactgaggagcaaaaaaccgagaagggaggaggagcagcagcagcaggccgccgccagc
aaaaagagctccagaagcacggtgggctgcgggcccggcttctggaaggagggatgccta
cagacagagctcatccagttccacctgaataagagcctcgggaagaaagggaccaagatg
caggccaagtccgcgtccccaccggcgtccgagccggagctgtcccctgagcccgacagt
ccacagagggctccacacccggaccacaagctgcaggaggagatcgagaggctggaggac
gaaaacgatgacctgaagactgaaattgaggagatgcgggcagagatggacgagatgcgg
gacactttctatgaagaggacgcctgtcagctgcaggacatgcgcagagagctggagaga
gccaacaagaactgccggatcctccagtaccggctaaagaaagctgagaggaagaggctc
aggttcactgagagcggccaggtggacggagagctactgaggagtatggagcaagacctg
aaggtggccaaggatgtgtcagtgcgcctgcaccacgagctggagaacgtggaggagaag
aggacaaagactgaggaggagaatgagaagctgaggcagaagctgatagaggtggaggtc
accaaacaggccctacaaaatgaacttgacaaagcaaaggagctctcactaaaaagaaaa
ggaagtaaggaaggacagaaaccagagaaaaagataccacaaacgccagtcgaggaggaa
aatgaggatctgaagtgccagctagccttcatcaaggaggaagccatcttaatgaggaag
aagatggcaaagatcgacaaggagaaggatcgcttggagcaggagctgcagaagtaccgt
tccttctacggtgacgtggacagccctctgcctaaaggtgaggctggagggcctcctacc
acccgggagtctgagctgaagctccgtctgcggctggtggaggaggaggccaacatcttg
gggaggaagatcgtggagctggaggtggagaacaggggcctgaaggctgagctggatgac
atgagggaggacagcctggcagcagcaggagtggatagctcaagcagtggaggccagcag
agcagggagcagggggaggccctgtctgagctgaggcagcagctgcagctggtggaggac
gaggctgaactcctccgcagaaatttagcagacgtagaagaagaaaacaaaaaggtgaca
acggagctcaataaactcaaatacaaggctggctcccatgaagctggatcaagacatgga
ggaggtggaggtgatcctgctaaagtggaggccctccaggaggagctgaaagcggcacgc
ctgcaaatcaacgaactgagcggcaaagtcatgcagctccagtacgagaaccgcgtgctg
ctctccaacatgcagcgctacgacctggcctcccacctgggcatccgcggcagccctcgg
gacagtgacgcagagagcgacgggggacgggacgacgacacgccctcggccgcctccccc
cgcctcctcccaccccatcgcaagcgcgagggccccattggtggcgagagtgactcggac
gaggtgaggaacatccgctgcctcaccccgactcgctccctttactcgcccgtcgatagt
cgttttttatccagaagcctgagggaccggcagcagatgatagacatccgcattgaggcg
gagaggctgggccggaccatcgacaggcttatcgctgacaccagcactatcatcacagag
gcacgagtttacgtcaccaatggggagctgttcgcccggctggacgaggacgaagaaggc
ggcaggatcagagagcacgagctgctgtatcgtatcaacgctcagatgaaggccttcagg
aaggagctgcagagcttcatagaccggctggacgtccccaagcaggaggataaacaggga
gaggagccgctgtctatgttccagcctattattttgcttattctcatcctagttctgttt
tcctcgctctcatatgccaccatttttaaacttgtgtttctttttaccctcttctttgtt
ctgtaa
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