Kryptolebias marmoratus (mangrove rivulus): 108232400
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Entry
108232400 CDS
T05608
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108232400 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108232400 (u2af1)
Spliceosome [BR:
kmr03041
]
Complex A
U2 snRNP components
U2 related factors
108232400 (u2af1)
Complex B
108232400 (u2af1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
IL4
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
108232400
NCBI-ProteinID:
XP_017265656
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All DBs
Position
LG6:complement(14973783..14977510)
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AA seq
227 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNNTQ
SLDGLTCTVSDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRNE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGRHRSRSRSRDRDRGRGGGRDHDRRRPRDRERSGRF
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatacctcgcatctatttttgggacagaaaaggataaggttaattgctctttt
tattttaaaattggtgcctgtcgacatggcgaccgctgctccagattacacaacaagccg
acgttcagccagacaatcgccctgctgaacatttacaggaaccctcagaacaacactcag
tctctggacggcctgacctgtaccgtcagtgacatggagatgcaggagcactacgatgag
tttttcgaggaagtcttcacggagatggaagagaagtacggagaggtggaggagatgaac
gtctgcgacaacctcggggaccacctggttggaaacgtctacgtgaagtttcggaacgaa
gaagatgctgagaaggctgtgatagacttgaacaaccgctggttcaacggacagcccatc
cacgccgagctctctcctgtcacagacttcagagaggcctgctgtcgtcagtacgagatg
ggtgaatgcacccgcggaggcttctgtaacttcatgcacctgaaacccatctcacgtgag
ctgaggagagagctgtatgggcgccgcaggaaggggcgccacaggtctcggtcccgatcc
agagaccgagacagagggcgagggggcggccgcgaccacgacaggcgccgtcccagagac
agagagcgttcagggcgattctga
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integrated database retrieval system
